PDB Chemical Component 50U

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 50U

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C2 C3 1.533 1.552
C2 C1 1.544 1.543
C24 N23 1.442 1.465
C24 C25 1.546 1.507
N23 C7 1.271 1.348
C3 C4 1.550 1.551
C30 C25 1.390 1.384
C30 C29 1.403 1.379
C7 O22 1.227 1.212
C7 C1 1.507 1.507
C1 N1 1.446 1.471
C25 C26 1.398 1.384
C29 C28 1.414 1.394
C4 N1 1.456 1.474
N1 C14 1.294 1.348
C26 C27 1.406 1.380
C28 C27 1.400 1.395
C28 C21 1.507 1.481
C14 O32 1.219 1.213
C14 C5 1.529 1.506
N47 C21 1.283 1.378
C21 N46 1.283 1.302
C5 C43 1.547 1.530
C46 C45 1.533 1.530
C46 C47 1.530 1.531
C45 C44 1.541 1.530
C44 C43 1.553 1.530
C44 C49 1.534 1.530
C47 C48 1.529 1.530
C48 C49 1.558 1.530
C1 H1 1.100 1.091
N23 HN23 1.000 0.970
C24 H24 1.100 1.090
C24 H24A 1.101 1.090
C26 H26 1.080 1.080
C27 H27 1.080 1.080
N46 HN46 1.000 0.970
N47 HN47 1.000 0.971
N47 HN4A 1.000 0.970
C29 H29 1.080 1.080
C30 H30 1.080 1.080
C2 H2 1.100 1.090
C2 H2A 1.100 1.091
C3 H3 1.100 1.090
C3 H3A 1.100 1.090
C4 H4 1.100 1.090
C4 H4A 1.100 1.090
C5 H5 1.100 1.090
C5 H5A 1.100 1.090
C43 H43 1.100 1.090
C43 H43A 1.100 1.090
C44 H44 1.101 1.090
C49 H49 1.100 1.090
C49 H49A 1.100 1.090
C48 H48 1.101 1.090
C48 H48A 1.100 1.090
C47 H47 1.100 1.090
C47 H47A 1.100 1.090
C46 H46 1.100 1.090
C46 H46A 1.100 1.090
C45 H45 1.100 1.090
C45 H45A 1.100 1.090

Bond Angles for 50U

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C3 C4 107.0 101.5
C3 C2 H2 109.9 110.7
C3 C2 H2A 109.9 110.7
C2 C3 H3 110.3 111.0
C2 C3 H3A 110.3 111.0
C2 C1 H1 116.8 109.9
C24 N23 HN23 119.6 120.0
C24 C25 C26 119.6 119.8
C25 C24 H24 109.6 109.5
C25 C24 H24A 109.6 109.5
C4 C3 H3 110.3 111.2
C4 C3 H3A 110.3 110.9
C3 C4 H4 113.1 110.4
C3 C4 H4A 113.2 110.4
C30 C29 H29 120.4 120.1
C7 C1 H1 104.3 109.9
C25 C26 C27 119.7 120.1
C25 C26 H26 120.1 119.9
C27 C26 H26 120.2 120.0
C26 C27 H27 119.9 120.1
C28 C27 H27 119.8 120.1
C28 C21 N46 120.7 120.0
C14 C5 H5 109.3 109.4
C14 C5 H5A 109.3 109.5
C21 N46 HN46 112.0 120.0
C5 C43 H43 107.7 109.5
C5 C43 H43A 107.6 109.4
C46 C45 H45 109.0 109.5
C46 C45 H45A 109.0 109.5
C46 C47 C48 116.1 109.5
C46 C47 H47 107.3 109.4
C46 C47 H47A 107.3 109.5
C47 C46 H46 106.7 109.5
C47 C46 H46A 106.6 109.5
C45 C44 C43 113.9 109.5
C45 C44 C49 110.0 109.5
C45 C44 H44 107.3 109.4
C49 C44 C43 113.2 109.5
C44 C43 H43 107.7 109.5
C44 C43 H43A 107.7 109.5
C43 C44 H44 103.7 109.5
C44 C49 C48 114.2 109.5
C49 C44 H44 108.2 109.5
C44 C49 H49 107.9 109.5
C44 C49 H49A 107.9 109.4
C47 C48 C49 111.7 109.5
C47 C48 H48 108.7 109.5
C47 C48 H48A 108.7 109.5
C48 C47 H47 107.3 109.5
C48 C47 H47A 107.3 109.5
C48 C49 H49 107.9 109.5
C48 C49 H49A 107.9 109.5
C49 C48 H48 108.7 109.5
C49 C48 H48A 108.7 109.5
H24 C24 H24A 109.3 109.5
HN47 N47 HN4A 120.0 120.0
H2 C2 H2A 109.0 110.8
H3 C3 H3A 108.7 110.9
H4 C4 H4A 105.6 110.4
H5 C5 H5A 109.6 109.4
H43 C43 H43A 111.2 109.5
H49 C49 H49A 111.0 109.5
H48 C48 H48A 110.2 109.5
H47 C47 H47A 111.5 109.5
H46 C46 H46A 112.1 109.5
H45 C45 H45A 110.0 109.5

Torsion Angles for 50U

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C3 C2 C1 H1 104.1 141.6
C4 C3 C2 H3 240.0 241.7
C4 C3 C2 H3A 120.0 117.9
C2 C3 C4 H4 104.1 278.1
C2 C3 C4 H4A 224.1 155.8
H2 C2 C3 H2A 240.0 123.3
H3 C3 C2 H3A 240.0 236.2
C7 C1 C2 H1 118.9 121.1
C25 C24 N23 HN23 295.3 360.0
C24 C25 C26 C27 180.0 180.0
C24 C25 C26 H26 360.0 0.1
H24 C24 C25 H24A 120.0 120.0
N23 C7 C1 H1 18.2 59.0
C4 C3 C2 H2 143.8 206.1
C4 C3 C2 H2A 263.8 82.8
C2 C3 C4 H3 120.0 118.1
C2 C3 C4 H3A 240.0 242.0
H3 C3 C4 H3A 120.0 123.9
H4 C4 C3 H4A 240.0 122.3
C30 C25 C24 H24 3.0 149.7
C30 C25 C24 H24A 243.0 29.7
C30 C25 C26 H26 180.0 180.3
O22 C7 C1 H1 198.0 239.0
C2 C1 C7 H1 233.7 238.9
C26 C25 C24 H24 183.0 330.0
C26 C25 C24 H24A 63.0 209.9
C27 C26 C25 H26 180.0 179.9
C25 C26 C27 H27 180.1 180.0
C29 C28 C27 H27 179.9 180.0
N1 C14 C5 H5 240.2 300.0
N1 C14 C5 H5A 0.2 59.9
C25 C26 C27 H26 180.0 180.1
C28 C27 C26 H27 180.0 180.1
C28 C27 C26 H26 180.1 180.0
C26 C27 C28 H27 180.0 179.9
C21 C28 C27 H27 360.0 0.1
C28 C21 N46 HN46 180.0 180.1
O32 C14 C5 H5 58.6 120.0
O32 C14 C5 H5A 178.6 239.9
C14 C5 C43 H43 61.1 300.0
C14 C5 C43 H43A 181.1 60.0
H5 C5 C14 H5A 240.0 240.1
N47 C21 N46 HN46 0.0 0.0
C44 C43 C5 H43 240.0 240.0
C44 C43 C5 H43A 120.0 120.0
C5 C43 C44 H44 49.9 55.0
H43 C43 C5 H43A 240.0 240.0
C46 C45 C44 C43 177.6 180.0
C46 C45 C44 C49 306.0 300.0
C46 C45 C44 H44 63.4 60.0
H45 C45 C46 H45A 240.0 120.0
C47 C46 C45 H45 164.4 300.0
C47 C46 C45 H45A 284.4 180.0
C46 C47 C48 C49 37.3 60.0
C46 C47 C48 H48 157.3 300.0
C46 C47 C48 H48A 277.3 180.0
C48 C47 C46 H47 240.0 120.0
C48 C47 C46 H47A 120.0 240.0
H47 C47 C46 H47A 240.0 120.0
H46 C46 C47 H46A 120.0 240.0
C49 C44 C45 C43 128.3 120.0
C45 C44 C43 H43 173.6 175.0
C45 C44 C43 H43A 53.6 55.0
C43 C44 C45 H44 114.2 120.0
C45 C44 C49 C48 59.3 60.0
C49 C44 C45 H44 242.5 240.0
C45 C44 C49 H49 179.2 180.0
C45 C44 C49 H49A 299.3 300.0
C5 C43 C44 H43 120.0 120.0
C5 C43 C44 H43A 240.0 240.0
C45 C44 C43 C49 126.7 120.0
C45 C44 C43 H44 243.7 240.1
C43 C44 C49 C48 188.0 180.0
C49 C44 C43 H44 117.0 120.0
C43 C44 C49 H49 308.0 300.0
C43 C44 C49 H49A 68.0 60.0
H43 C43 C44 H43A 120.0 120.0
C45 C44 C49 C43 231.2 240.0
C45 C44 C49 H44 116.9 120.0
C49 C44 C43 H43 46.9 55.0
C49 C44 C43 H43A 286.9 295.0
C43 C44 C49 H44 245.7 240.0
C47 C48 C49 C44 310.0 300.0
C48 C49 C44 H49 240.0 240.0
C48 C49 C44 H49A 120.0 120.0
C44 C49 C48 H48 190.0 60.0
C44 C49 C48 H48A 70.0 180.0
H49 C49 C44 H49A 240.0 240.0
C46 C47 C48 H47 120.0 240.1
C46 C47 C48 H47A 240.0 120.0
C48 C47 C46 H46 203.3 60.0
C48 C47 C46 H46A 83.3 180.0
C44 C49 C48 C47 310.0 300.0
C47 C48 C49 H49 190.0 180.0
C47 C48 C49 H49A 70.0 60.0
C49 C48 C47 H48 240.0 120.0
C49 C48 C47 H48A 120.0 240.0
H48 C48 C47 H48A 240.0 120.0
H47 C47 C48 H47A 120.0 239.9
C48 C49 C44 C43 188.0 180.0
C48 C49 C44 H44 302.3 300.0
C44 C49 C48 H49 120.0 120.0
C44 C49 C48 H49A 240.0 240.0
C47 C48 C49 H48 120.0 240.0
C47 C48 C49 H48A 240.0 120.0
C49 C48 C47 H47 277.3 180.0
C49 C48 C47 H47A 157.3 300.0
H49 C49 C48 H49A 120.0 120.0
H48 C48 C49 H48A 120.0 240.0
H24 C24 N23 HN23 55.2 120.0
H24 C24 C25 C26 183.0 330.0
C25 C24 H24 H24A 239.8 240.0
H24A C24 N23 HN23 175.2 240.0
H24A C24 C25 C26 63.0 209.9
C25 C24 H24A H24 120.1 120.0
C25 C26 H26 C27 180.0 179.9
H26 C26 C27 H27 0.1 359.9
H27 C27 C26 H26 0.1 359.9
H30 C30 C29 H29 360.0 359.9
H2 C2 C3 C4 143.8 206.1
C3 C2 H2 H2A 120.5 236.8
H2 C2 C3 H3 263.8 324.4
H2 C2 C3 H3A 23.8 88.2
H2 C2 C1 H1 344.1 259.9
H2A C2 C3 C4 263.8 82.8
C3 C2 H2A H2 239.5 123.2
H2A C2 C3 H3 23.8 201.1
H2A C2 C3 H3A 143.8 324.9
H2A C2 C1 H1 224.1 23.2
C2 C3 H3 C4 242.0 247.8
H3 C3 C2 H2 263.8 324.4
H3 C3 C2 H2A 23.8 201.1
C2 C3 H3 H3A 121.0 123.9
C4 C3 H3 H3A 239.0 236.1
H3 C3 C4 H4 344.1 160.1
H3 C3 C4 H4A 104.1 37.8
C2 C3 H3A C4 118.0 112.0
H3A C3 C2 H2 23.8 88.2
H3A C3 C2 H2A 143.8 324.9
C2 C3 H3A H3 239.0 236.2
C4 C3 H3A H3 121.0 124.1
H3A C3 C4 H4 224.0 36.1
H3A C3 C4 H4A 344.0 273.8
H4 C4 C3 H3 344.1 160.1
H4 C4 C3 H3A 224.0 36.1
C3 C4 H4 H4A 124.3 237.7
H4A C4 C3 H3 104.1 37.8
H4A C4 C3 H3A 344.0 273.8
C3 C4 H4A H4 235.8 122.3
C14 C5 H5 H5A 119.8 120.0
H5 C5 C43 H43 301.1 180.0
H5 C5 C43 H43A 61.0 300.0
C14 C5 H5A H5 240.2 240.1
H5A C5 C43 H43 181.1 60.1
H5A C5 C43 H43A 301.1 180.1
C5 C43 H43 H43A 117.7 120.0
C44 C43 H43 H43A 242.3 240.0
H43 C43 C44 H44 289.9 295.0
C5 C43 H43A H43 242.3 240.0
C44 C43 H43A H43 117.7 120.0
H43A C43 C44 H44 169.9 175.0
C45 C44 H44 C43 120.9 120.0
C45 C44 H44 C49 241.3 240.0
C49 C44 H44 C43 239.6 240.0
H44 C44 C43 H43 289.9 295.0
H44 C44 C43 H43A 169.9 175.0
H44 C44 C49 C48 302.3 300.0
H44 C44 C49 H49 62.3 60.0
H44 C44 C49 H49A 182.3 180.0
H49 C49 C44 C43 308.0 300.0
C44 C49 H49 C48 236.1 240.0
H49 C49 C44 H44 62.3 60.0
C44 C49 H49 H49A 118.1 120.0
C48 C49 H49 H49A 242.0 240.0
H49 C49 C48 H48 70.0 300.0
H49 C49 C48 H48A 310.0 60.0
H49A C49 C44 C43 68.0 60.0
C44 C49 H49A C48 123.9 120.0
H49A C49 C44 H44 182.3 180.0
C44 C49 H49A H49 241.9 240.0
C48 C49 H49A H49 118.0 120.0
H49A C49 C48 H48 310.0 180.0
H49A C49 C48 H48A 190.0 300.0
C47 C48 H48 C49 238.1 120.0
C47 C48 H48 H48A 119.1 240.0
H48 C48 C47 H47 37.3 60.0
H48 C48 C47 H47A 277.3 180.0
H48 C48 C49 H49 70.0 300.0
H48 C48 C49 H49A 310.0 180.0
C49 C48 H48 H48A 241.0 120.0
C47 C48 H48A C49 121.9 240.0
C47 C48 H48A H48 240.9 120.0
H48A C48 C47 H47 157.3 299.9
H48A C48 C47 H47A 37.3 60.0
H48A C48 C49 H49 310.0 60.0
H48A C48 C49 H49A 190.0 300.0
C49 C48 H48A H48 119.0 240.0
C46 C47 H47 C48 234.5 120.0
C46 C47 H47 H47A 117.3 240.0
H47 C47 C46 H46 323.3 300.0
H47 C47 C46 H46A 203.3 60.0
H47 C47 C48 C49 277.3 180.0
H47 C47 C48 H48 37.3 60.0
H47 C47 C48 H48A 157.3 299.9
C48 C47 H47 H47A 242.7 120.1
C46 C47 H47A C48 125.4 240.0
C46 C47 H47A H47 242.7 119.9
H47A C47 C46 H46 83.3 180.0
H47A C47 C46 H46A 323.3 300.0
H47A C47 C48 C49 157.3 300.0
H47A C47 C48 H48 277.3 180.0
H47A C47 C48 H48A 37.3 60.0
C48 C47 H47A H47 117.3 239.9
H46 C46 C45 H45 284.4 180.0
H46 C46 C45 H45A 44.4 60.0
H46 C46 C47 C48 203.3 60.0
H46 C46 C47 H47 323.3 300.0
H46 C46 C47 H47A 83.3 180.0
C47 C46 H46 H46A 243.6 120.0
H46A C46 C45 H45 44.4 60.0
H46A C46 C45 H45A 164.4 300.0
H46A C46 C47 C48 83.3 180.0
H46A C46 C47 H47 203.3 60.0
H46A C46 C47 H47A 323.3 300.0
C47 C46 H46A H46 116.4 240.0
C46 C45 H45 H45A 119.4 240.0
H45 C45 C44 C43 57.6 300.0
H45 C45 C44 C49 186.0 60.0
H45 C45 C44 H44 303.4 180.0
C46 C45 H45A H45 240.6 120.0
H45A C45 C44 C43 297.6 60.0
H45A C45 C44 C49 65.9 180.0
H45A C45 C44 H44 183.4 300.0