PDB Chemical Component 50L

Experimental Model

Chemical Description

Name [(2R,3S,4R,5R)-5-(4-azanyl-2-oxidanylidene-1$l^{4},3,5,7-tetrazabicyclo[4.3.0]nona-1(6),3,8-trien-7-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate
Formula C10 H15 N5 O8 P
Formal charge 0
Molecular weight 364.229 g/mol
Component type RNA linking

Chemical features

Atom count 39
Chiral atom count 4
Chiral atoms C6 C7 C8 C9
Observed leaving atoms O8
Bond count 41
Aromatic bond count 5

Chemical Identifiers

Systematic name (OpenEye OEToolkits) [(2R,3S,4R,5R)-5-(4-azanyl-2-oxidanylidene-1$l^{4},3,5,7-tetrazabicyclo[4.3.0]nona-1(6),3,8-trien-7-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) NC1=NC(=O)[n]2ccn([C@@H]3O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]3O)c2N1
SMILES (CACTVS) NC1=NC(=O)[n]2ccn([CH]3O[CH](CO[P](O)(O)=O)[CH](O)[CH]3O)c2N1
Stereo SMILES (OpenEye) C1=C[N]2=C(N1[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O)NC(=NC2=O)N
InChI descriptor InChI=1S/C10H15N5O8P/c11-8-12-9-14(1-2-15(9)10(18)13-8)7-6(17)5(16)4(23-7)3-22-24(19,20)21/h1-2,4-7,16-17H,3H2,(H2,19,20,21)(H3,11,12,13,18)/t4-,5-,6-,7-/m1/s1
InChIKey descriptor OOKOLEOTYJWYLQ-DBRKOABJSA-N

Status Information

Last modified 2015-08-07
Created 2015-07-08
Release status REL
Model PDB code 5C7W
Processing site RCSB