PDB Chemical Component 50D

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 50D

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C30 C29 1.567 1.540
C30 O31 1.438 1.442
C25 C24 1.526 1.530
C25 N26 1.475 1.468
C29 N26 1.477 1.470
C29 C32 1.584 1.541
O31 C32 1.417 1.441
C24 C23 1.534 1.531
N26 C27 1.476 1.468
C23 C12 1.512 1.507
C23 C28 1.530 1.531
C18 C17 1.525 1.545
C18 C19 1.546 1.543
C27 C28 1.529 1.530
C17 N16 1.467 1.485
C13 C12 1.393 1.386
C13 C14 1.403 1.390
C12 C11 1.389 1.386
N16 C14 1.388 1.390
N16 C20 1.479 1.486
C14 N15 1.342 1.325
C11 C10 1.393 1.389
F22 C19 1.372 1.398
C20 C19 1.549 1.544
C19 F21 1.370 1.399
N15 C10 1.338 1.326
C10 N9 1.386 1.392
N9 C4 1.385 1.392
C4 N3 1.351 1.324
C4 C5 1.405 1.391
N3 C2 1.344 1.319
C5 C6 1.394 1.396
C2 C1 1.382 1.379
C6 C1 1.389 1.402
C6 C7 1.442 1.432
C7 N8 1.143 1.137
C5 H1 1.080 1.080
C11 H2 1.080 1.080
C13 H3 1.080 1.080
C1 H4 1.080 1.080
C2 H5 1.080 1.080
N9 H6 1.000 0.969
C17 H7 1.100 1.090
C17 H8 1.100 1.090
C18 H9 1.100 1.090
C18 H10 1.100 1.089
C20 H11 1.100 1.090
C20 H12 1.100 1.091
C23 H13 1.100 1.090
C24 H14 1.100 1.090
C24 H15 1.100 1.089
C25 H16 1.100 1.090
C25 H17 1.100 1.090
C27 H19 1.100 1.091
C27 H20 1.100 1.090
C28 H21 1.100 1.090
C28 H22 1.100 1.091
C29 H23 1.100 1.089
C30 H24 1.100 1.090
C30 H25 1.100 1.089
C32 H26 1.100 1.089
C32 H27 1.100 1.091

Bond Angles for 50D

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C30 C29 C32 81.1 85.8
C30 C29 H23 113.3 114.0
C30 O31 C32 91.7 93.3
O31 C30 H24 114.7 113.9
O31 C30 H25 114.7 113.8
C25 C24 H14 109.1 109.5
C25 C24 H15 109.0 109.6
C25 N26 C27 111.0 111.2
N26 C25 H16 108.9 109.5
N26 C25 H17 108.9 109.5
C29 C32 O31 87.5 85.5
C32 C29 H23 113.0 113.8
C29 C32 H26 114.7 113.9
C29 C32 H27 114.6 113.8
O31 C32 H26 114.7 113.9
O31 C32 H27 114.7 113.9
C24 C23 C28 109.2 109.1
C24 C23 H13 106.2 109.6
N26 C27 C28 112.2 109.5
N26 C27 H19 108.8 109.5
N26 C27 H20 108.8 109.5
C23 C28 C27 110.9 109.3
C28 C23 H13 106.3 109.5
C23 C28 H21 109.1 109.5
C23 C28 H22 109.1 109.5
C18 C17 H7 110.1 110.4
C18 C17 H8 110.1 110.5
C18 C19 F21 110.1 110.3
C19 C18 H9 111.4 110.3
C19 C18 H10 111.4 110.3
C28 C27 H19 108.8 109.5
C28 C27 H20 108.8 109.5
C27 C28 H21 109.1 109.5
C27 C28 H22 109.1 109.5
C17 N16 C20 111.1 104.3
C13 C14 N15 121.2 120.7
C12 C11 H2 120.6 120.3
N16 C20 C19 103.4 104.6
N16 C20 H11 111.0 110.4
N16 C20 H12 111.0 110.4
C14 N15 C10 119.7 121.5
C11 C10 N9 118.6 119.7
C10 C11 H2 120.5 120.4
C20 C19 F21 111.0 110.3
C10 N9 H6 113.6 120.0
C5 C4 N3 123.1 120.7
C4 N3 C2 117.4 121.9
C4 C5 C6 117.6 118.9
C4 C5 H1 121.2 120.5
N3 C2 C1 123.7 121.0
N3 C2 H5 118.1 119.5
C5 C6 C1 119.8 118.3
C5 C6 C7 119.8 120.9
C6 C5 H1 121.2 120.6
C2 C1 H4 120.8 120.4
C7 C6 C1 120.4 120.9
C6 C1 H4 120.8 120.4
C6 C7 N8 178.4 179.9
H7 C17 H8 109.4 110.4
H9 C18 H10 109.4 110.4
H11 C20 H12 109.4 110.5
H14 C24 H15 109.4 109.5
H16 C25 H17 109.5 109.4
H19 C27 H20 109.4 109.4
H21 C28 H22 109.5 109.5
H24 C30 H25 109.4 113.1
H26 C32 H27 109.5 113.1

Torsion Angles for 50D

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C30 C29 C32 O31 25.2 337.4
C32 C29 C30 H23 111.3 114.2
C30 C29 C32 H26 141.3 91.6
C30 C29 C32 H27 269.2 223.2
O31 C30 C29 C32 335.2 22.6
O31 C30 C29 H23 223.9 268.4
C29 C32 O31 C30 332.7 24.2
C30 O31 C32 H26 216.6 270.0
C30 O31 C32 H27 88.7 138.3
H24 C30 O31 H25 127.9 131.7
C25 C24 C23 C28 54.9 57.7
C25 C24 C23 H13 300.7 297.7
H14 C24 C25 H15 240.5 120.1
N26 C25 C24 H14 63.4 180.9
N26 C25 C24 H15 182.9 60.8
C25 N26 C27 C28 303.3 298.3
C25 N26 C27 H19 63.8 58.3
C25 N26 C27 H20 182.9 178.2
H16 C25 N26 H17 119.3 120.0
C29 N26 C25 H16 62.7 65.8
C29 N26 C25 H17 303.4 305.9
C29 N26 C27 H19 298.3 294.2
C29 N26 C27 H20 57.4 54.2
C30 C29 C32 H23 248.4 245.6
C30 O31 C32 C29 332.7 24.2
O31 C32 C29 H26 243.9 245.8
O31 C32 C29 H27 116.1 114.2
H26 C32 C29 H27 232.1 228.4
C32 O31 C30 H24 271.6 221.7
C32 O31 C30 H25 143.7 90.0
O31 C32 C29 H23 136.8 91.8
C29 C32 O31 H26 116.1 114.2
C29 C32 O31 H27 244.0 245.9
H26 C32 O31 H27 127.9 131.7
C24 C23 C28 C27 305.7 302.3
C28 C23 C24 H13 114.2 119.9
C24 C23 C28 H21 65.9 62.3
C24 C23 C28 H22 185.5 182.4
C27 N26 C25 H16 296.6 301.7
C27 N26 C25 H17 177.3 181.8
C23 C28 C27 N26 56.1 59.2
C28 C27 N26 H19 239.6 240.0
C28 C27 N26 H20 120.4 120.0
N26 C27 C28 H21 295.9 299.2
N26 C27 C28 H22 176.3 179.1
H19 C27 N26 H20 240.9 240.0
C23 C12 C11 H2 5.4 360.0
C24 C23 C28 H13 245.8 240.0
N26 C27 C28 C23 56.1 59.2
C23 C28 C27 H19 295.6 299.2
C23 C28 C27 H20 176.5 179.2
C27 C28 C23 H21 239.8 240.1
C27 C28 C23 H22 120.2 120.0
H21 C28 C23 H22 240.4 239.9
C18 C17 N16 C20 347.5 320.6
H7 C17 C18 H8 239.3 122.4
C19 C18 C17 H7 147.8 265.1
C19 C18 C17 H8 268.6 142.7
N16 C20 C19 C18 26.7 336.2
C20 C19 C18 F21 240.1 241.2
H9 C18 C19 H10 122.5 122.2
N26 C27 C28 H19 120.4 120.0
N26 C27 C28 H20 239.6 240.0
C27 C28 C23 H13 59.9 62.3
C23 C28 C27 H21 120.2 119.9
C23 C28 C27 H22 239.8 240.0
H19 C27 C28 H20 119.1 119.9
H21 C28 C27 H22 119.6 120.1
C17 N16 C20 C19 351.1 39.5
C17 N16 C20 H11 110.1 158.3
C17 N16 C20 H12 232.0 280.7
C12 C13 C14 N15 1.9 360.0
C13 C12 C11 H2 180.6 180.0
C13 C14 N15 C10 359.6 0.0
C12 C11 C10 N9 179.9 180.0
C10 C11 C12 H2 180.0 180.0
N16 C20 C19 F21 267.4 217.3
H11 C20 N16 H12 238.1 237.6
C12 C11 C10 H2 180.0 180.0
C14 N15 C10 C11 359.0 0.0
C11 C10 N9 H6 356.5 5.3
F22 C19 C18 H9 84.8 122.1
F22 C19 C18 H10 322.3 359.9
C18 C19 C20 F21 119.3 118.9
C20 C19 C18 H9 207.6 241.1
C20 C19 C18 H10 85.1 118.9
N16 C20 C19 H11 119.0 118.8
N16 C20 C19 H12 241.0 241.3
F21 C19 C18 H9 327.6 360.0
F21 C19 C18 H10 205.0 237.7
N15 C10 C11 H2 180.9 179.9
N15 C10 N9 H6 175.5 185.4
C14 N15 C10 N9 180.0 180.0
N9 C10 C11 H2 359.9 360.0
N9 C4 C5 H1 0.7 359.6
N3 C4 C5 C6 0.7 0.0
N3 C4 C5 H1 180.7 180.0
C4 N3 C2 C1 358.0 0.1
C4 N3 C2 H5 178.1 179.9
C5 C4 N3 C2 1.1 360.0
C4 C5 C6 C1 358.3 360.0
C4 C5 C6 C7 177.6 180.0
C6 C5 C4 H1 180.0 180.0
N3 C2 C1 H4 181.0 180.0
C6 C5 C4 N3 0.7 0.0
C4 C5 C6 H1 180.0 180.0
C7 C6 C5 C1 179.3 180.0
C5 C6 C1 H4 180.9 179.9
C5 C6 C7 N8 168.5 89.8
N3 C2 C1 H5 180.0 179.9
C6 C1 C2 H4 180.0 179.9
N3 C2 C1 C6 1.0 360.0
C5 C6 C1 C7 179.3 180.0
C1 C6 C5 H1 178.3 180.0
C2 C1 C6 H4 180.0 180.1
C1 C6 C7 N8 347.8 269.8
C5 C6 C7 C1 180.7 180.0
C7 C6 C5 H1 357.6 0.0
C7 C6 C1 H4 1.6 360.0
N8 C7 C6 C1 347.8 269.8
H1 C5 C4 N3 180.7 180.0
C4 C5 H1 C6 180.0 180.1
H1 C5 C6 C1 178.3 180.0
H1 C5 C6 C7 357.6 0.0
H2 C11 C10 N9 359.9 360.0
H3 C13 C14 N15 181.9 180.0
N3 C2 H5 C1 180.0 180.1
H5 C2 C1 H4 1.0 0.1
C18 C17 H7 H8 121.1 237.6
H7 C17 N16 C20 227.8 79.3
C18 C17 H8 H7 238.9 122.4
H8 C17 N16 C20 107.1 201.7
H9 C18 C17 H7 266.5 23.9
H9 C18 C17 H8 27.3 261.6
H9 C18 C19 F21 327.6 360.0
C19 C18 H9 H10 236.3 237.8
H10 C18 C17 H7 29.1 146.2
H10 C18 C17 H8 149.8 23.8
H10 C18 C19 F21 205.0 237.7
C19 C18 H10 H9 123.7 122.2
N16 C20 H11 C19 245.7 244.8
N16 C20 H11 H12 122.8 122.4
H11 C20 C19 F21 148.3 98.5
N16 C20 H12 C19 114.4 115.1
N16 C20 H12 H11 237.2 237.6
H12 C20 C19 F21 26.4 336.0
C24 C23 H13 C28 116.2 119.7
H13 C23 C28 C27 59.9 62.3
H13 C23 C28 H21 180.1 182.2
H13 C23 C28 H22 299.7 302.3
C25 C24 H14 H15 119.2 239.8
H14 C24 C23 C28 294.6 177.6
H14 C24 C23 H13 180.4 57.6
C25 C24 H15 H14 240.7 120.1
H15 C24 C23 C28 175.1 297.7
H15 C24 C23 H13 60.9 177.7
H16 C25 C24 H14 183.7 300.9
H16 C25 C24 H15 303.2 180.8
H16 C25 N26 C27 296.6 301.7
N26 C25 H16 H17 241.1 240.0
H17 C25 C24 H14 303.1 60.9
H17 C25 C24 H15 62.6 300.7
H17 C25 N26 C27 177.3 181.8
N26 C25 H17 H16 118.9 120.0
N26 C27 H19 C28 237.5 239.9
N26 C27 H19 H20 118.7 120.0
C28 C27 H19 H20 241.3 240.0
H19 C27 C28 H21 175.4 179.2
H19 C27 C28 H22 55.9 59.1
N26 C27 H20 C28 122.5 120.1
N26 C27 H20 H19 241.2 240.0
C28 C27 H20 H19 118.7 120.0
H20 C27 C28 H21 56.3 59.3
H20 C27 C28 H22 296.7 299.2
C23 C28 H21 C27 238.7 240.2
H21 C28 C23 H13 180.1 182.2
C23 C28 H21 H22 119.4 120.1
H21 C28 C27 H19 175.4 179.2
H21 C28 C27 H20 56.3 59.3
C27 C28 H21 H22 240.7 239.9
C23 C28 H22 C27 121.3 119.8
H22 C28 C23 H13 299.7 302.3
C23 C28 H22 H21 240.7 239.9
H22 C28 C27 H19 55.9 59.1
H22 C28 C27 H20 296.7 299.2
C27 C28 H22 H21 119.3 120.1
C30 C29 H23 C32 89.9 96.2
H23 C29 C32 O31 136.8 91.8
H23 C29 C32 H26 252.9 206.0
H23 C29 C32 H27 20.7 337.6
H24 C30 C29 C32 91.2 136.7
H24 C30 C29 H23 339.9 22.5
H24 C30 O31 C32 271.6 221.7
O31 C30 H24 H25 229.5 227.9
H25 C30 C29 C32 219.1 268.5
H25 C30 C29 H23 107.8 154.2
H25 C30 O31 C32 143.7 90.0
O31 C30 H25 H24 130.5 132.1
C29 C32 H26 O31 261.0 264.1
H26 C32 C29 H23 252.9 206.0
C29 C32 H26 H27 130.5 132.0
O31 C32 H26 H27 229.5 227.9
C29 C32 H27 O31 99.0 95.9
H27 C32 C29 H23 20.7 337.6
C29 C32 H27 H26 229.5 228.0
O31 C32 H27 H26 130.5 132.1