PDB Chemical Component 506
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 506
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| FAD |
CAV |
1.315 |
1.351 |
| CAV |
CAI |
1.394 |
1.384 |
| CAV |
CAO |
1.401 |
1.385 |
| CAI |
CAJ |
1.380 |
1.383 |
| CAO |
CBA |
1.402 |
1.385 |
| OAC |
CBC |
1.230 |
1.215 |
| CAJ |
CAZ |
1.420 |
1.385 |
| CBA |
CAZ |
1.455 |
1.392 |
| CBA |
OAT |
1.407 |
1.360 |
| NAS |
CBC |
1.407 |
1.346 |
| NAS |
CBB |
1.417 |
1.349 |
| CBC |
NBD |
1.438 |
1.346 |
| CAZ |
OAU |
1.412 |
1.361 |
| OAT |
CAQ |
1.464 |
1.429 |
| OAB |
CBB |
1.229 |
1.217 |
| CBB |
CAK |
1.463 |
1.416 |
| NBD |
CAR |
1.495 |
1.465 |
| NBD |
CAL |
1.403 |
1.368 |
| OAU |
CAY |
1.392 |
1.359 |
| CAQ |
CAR |
1.560 |
1.530 |
| CAK |
CAL |
1.354 |
1.350 |
| CAN |
CAY |
1.401 |
1.388 |
| CAN |
CAW |
1.402 |
1.385 |
| CAY |
CAP |
1.405 |
1.384 |
| FAE |
CAW |
1.334 |
1.351 |
| CAW |
CAM |
1.409 |
1.381 |
| CAP |
CAX |
1.410 |
1.398 |
| CAM |
CAX |
1.396 |
1.399 |
| CAX |
CAH |
1.500 |
1.472 |
| CAH |
CAG |
1.356 |
1.348 |
| CAG |
CAF |
1.413 |
1.432 |
| CAF |
NAA |
1.184 |
1.136 |
| NAS |
H1 |
1.000 |
0.970 |
| CAK |
H2 |
1.080 |
1.080 |
| CAL |
H3 |
1.080 |
1.080 |
| CAR |
H4 |
1.100 |
1.090 |
| CAR |
H5 |
1.100 |
1.090 |
| CAQ |
H6 |
1.100 |
1.089 |
| CAQ |
H7 |
1.099 |
1.090 |
| CAO |
H8 |
1.080 |
1.080 |
| CAI |
H9 |
1.080 |
1.081 |
| CAJ |
H10 |
1.080 |
1.079 |
| CAP |
H11 |
1.080 |
1.080 |
| CAN |
H12 |
1.080 |
1.080 |
| CAM |
H13 |
1.080 |
1.080 |
| CAH |
H14 |
1.080 |
1.080 |
| CAG |
H15 |
1.080 |
1.080 |
Bond Angles for 506
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| FAD |
CAV |
CAI |
119.4 |
119.9 |
| CAV |
CAI |
CAJ |
118.1 |
120.1 |
| CAV |
CAI |
H9 |
120.9 |
119.9 |
| CAV |
CAO |
H8 |
118.8 |
120.0 |
| CAI |
CAJ |
CAZ |
124.0 |
120.0 |
| CAJ |
CAI |
H9 |
121.0 |
120.0 |
| CAI |
CAJ |
H10 |
118.0 |
120.0 |
| CAO |
CBA |
CAZ |
117.8 |
119.9 |
| OAC |
CBC |
NBD |
121.9 |
119.6 |
| CBA |
CAZ |
CAJ |
117.2 |
119.9 |
| CAJ |
CAZ |
OAU |
118.7 |
120.0 |
| CAZ |
CAJ |
H10 |
118.0 |
120.0 |
| CBA |
CAZ |
OAU |
124.1 |
120.0 |
| NAS |
CBC |
NBD |
118.3 |
120.9 |
| NAS |
CBB |
CAK |
114.7 |
119.4 |
| CBB |
NAS |
H1 |
118.0 |
119.9 |
| CBC |
NBD |
CAR |
120.1 |
119.7 |
| CBC |
NBD |
CAL |
118.6 |
120.7 |
| CAZ |
OAU |
CAY |
121.6 |
118.0 |
| OAT |
CAQ |
H6 |
110.0 |
109.5 |
| OAT |
CAQ |
H7 |
110.0 |
109.5 |
| OAB |
CBB |
CAK |
126.2 |
120.3 |
| CBB |
CAK |
CAL |
122.0 |
119.1 |
| CBB |
CAK |
H2 |
119.0 |
120.4 |
| NBD |
CAR |
H4 |
108.1 |
109.4 |
| NBD |
CAR |
H5 |
108.2 |
109.5 |
| NBD |
CAL |
H3 |
118.8 |
120.2 |
| OAU |
CAY |
CAP |
119.2 |
120.0 |
| CAQ |
CAR |
H4 |
108.2 |
109.5 |
| CAQ |
CAR |
H5 |
108.2 |
109.5 |
| CAL |
CAK |
H2 |
119.0 |
120.4 |
| CAK |
CAL |
H3 |
118.8 |
120.2 |
| CAN |
CAW |
CAM |
123.3 |
120.2 |
| CAW |
CAN |
H12 |
121.4 |
119.9 |
| CAY |
CAP |
CAX |
122.6 |
119.8 |
| CAY |
CAP |
H11 |
118.7 |
120.2 |
| FAE |
CAW |
CAM |
119.1 |
119.9 |
| CAW |
CAM |
CAX |
119.2 |
119.9 |
| CAW |
CAM |
H13 |
120.4 |
120.1 |
| CAP |
CAX |
CAM |
117.8 |
119.7 |
| CAP |
CAX |
CAH |
122.8 |
120.1 |
| CAX |
CAP |
H11 |
118.7 |
120.0 |
| CAM |
CAX |
CAH |
119.4 |
120.2 |
| CAX |
CAM |
H13 |
120.4 |
120.0 |
| CAX |
CAH |
CAG |
127.9 |
120.0 |
| CAX |
CAH |
H14 |
116.1 |
120.0 |
| CAH |
CAG |
CAF |
128.6 |
119.9 |
| CAG |
CAH |
H14 |
116.1 |
120.1 |
| CAH |
CAG |
H15 |
115.7 |
120.0 |
| CAG |
CAF |
NAA |
178.7 |
179.9 |
| CAF |
CAG |
H15 |
115.7 |
120.0 |
| H4 |
CAR |
H5 |
109.5 |
109.5 |
| H6 |
CAQ |
H7 |
109.4 |
109.5 |
Torsion Angles for 506
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| FAD |
CAV |
CAI |
CAJ |
179.9 |
180.0 |
| FAD |
CAV |
CAI |
H9 |
359.9 |
360.0 |
| FAD |
CAV |
CAO |
H8 |
0.0 |
0.0 |
| CAI |
CAV |
CAO |
H8 |
180.1 |
180.0 |
| CAV |
CAI |
CAJ |
CAZ |
359.9 |
360.0 |
| CAJ |
CAI |
CAV |
H9 |
180.0 |
180.0 |
| CAV |
CAI |
CAJ |
H10 |
179.9 |
180.0 |
| CAV |
CAO |
CBA |
CAZ |
0.3 |
360.0 |
| CAV |
CAI |
CAJ |
H9 |
180.0 |
180.0 |
| CBA |
CAZ |
CAJ |
CAI |
0.5 |
360.0 |
| CAI |
CAJ |
CAZ |
OAU |
179.6 |
180.3 |
| CAZ |
CAJ |
CAI |
H10 |
180.0 |
180.0 |
| CAO |
CBA |
CAZ |
CAJ |
359.4 |
0.0 |
| CAO |
CBA |
CAZ |
OAU |
180.3 |
179.8 |
| NAS |
CBC |
OAC |
NBD |
179.9 |
180.2 |
| OAC |
CBC |
NBD |
CAR |
359.9 |
360.0 |
| OAC |
CBC |
NBD |
CAL |
180.0 |
179.7 |
| CAZ |
CAJ |
CAI |
H9 |
179.9 |
180.0 |
| CAI |
CAJ |
CAZ |
H10 |
180.0 |
180.0 |
| CBA |
CAZ |
CAJ |
OAU |
180.9 |
179.7 |
| CAJ |
CAZ |
OAU |
CAY |
85.1 |
0.6 |
| CAI |
CAJ |
CAZ |
CBA |
0.5 |
360.0 |
| CAJ |
CAZ |
CBA |
OAU |
179.1 |
180.3 |
| CBA |
CAZ |
CAJ |
H10 |
180.5 |
180.0 |
| CBA |
CAZ |
OAU |
CAY |
264.1 |
180.9 |
| CBA |
OAT |
CAQ |
H6 |
330.0 |
60.0 |
| CBA |
OAT |
CAQ |
H7 |
90.6 |
300.0 |
| OAC |
CBC |
NAS |
NBD |
180.1 |
179.8 |
| NAS |
CBC |
NBD |
CAR |
180.0 |
179.7 |
| NAS |
CBC |
NBD |
CAL |
0.2 |
359.5 |
| CBB |
NAS |
CBC |
NBD |
359.8 |
0.2 |
| OAB |
CBB |
NAS |
CAK |
179.6 |
180.0 |
| NAS |
CBB |
CAK |
CAL |
359.7 |
360.0 |
| NAS |
CBB |
CAK |
H2 |
179.7 |
180.0 |
| CBC |
NBD |
CAR |
H4 |
11.9 |
210.0 |
| CBC |
NBD |
CAR |
H5 |
130.4 |
330.0 |
| CBC |
NBD |
CAL |
H3 |
179.8 |
180.2 |
| CBA |
CAZ |
OAU |
CAJ |
179.0 |
180.3 |
| OAU |
CAZ |
CAJ |
H10 |
359.6 |
0.3 |
| CAZ |
OAU |
CAY |
CAP |
197.0 |
90.0 |
| OAT |
CAQ |
CAR |
H4 |
337.2 |
305.0 |
| OAT |
CAQ |
CAR |
H5 |
218.7 |
185.0 |
| H6 |
CAQ |
OAT |
H7 |
239.4 |
120.1 |
| NAS |
CBB |
OAB |
CAK |
180.5 |
180.0 |
| OAB |
CBB |
NAS |
H1 |
359.9 |
360.0 |
| OAB |
CBB |
CAK |
CAL |
180.2 |
180.0 |
| OAB |
CBB |
CAK |
H2 |
0.2 |
360.0 |
| CAK |
CBB |
NAS |
H1 |
180.3 |
180.0 |
| CAL |
CAK |
CBB |
H2 |
180.0 |
180.0 |
| CBB |
CAK |
CAL |
H3 |
180.2 |
180.0 |
| CBC |
NBD |
CAR |
CAL |
180.2 |
179.8 |
| CAR |
NBD |
CAL |
H3 |
360.0 |
0.0 |
| CAQ |
CAR |
NBD |
H4 |
239.2 |
240.0 |
| CAQ |
CAR |
NBD |
H5 |
120.7 |
120.0 |
| H4 |
CAR |
NBD |
H5 |
241.5 |
240.0 |
| CBC |
NBD |
CAL |
CAR |
179.8 |
180.2 |
| NBD |
CAL |
CAK |
H2 |
180.2 |
179.8 |
| CAK |
CAL |
NBD |
H3 |
180.0 |
180.2 |
| OAU |
CAY |
CAP |
CAX |
180.3 |
180.0 |
| OAU |
CAY |
CAP |
H11 |
0.3 |
0.0 |
| NBD |
CAR |
CAQ |
H4 |
120.7 |
120.0 |
| NBD |
CAR |
CAQ |
H5 |
239.3 |
240.0 |
| H4 |
CAR |
CAQ |
H5 |
118.5 |
120.0 |
| CBC |
NBD |
CAL |
CAK |
359.8 |
0.5 |
| CBB |
CAK |
CAL |
H2 |
180.0 |
180.0 |
| NBD |
CAL |
CAK |
H3 |
180.0 |
179.8 |
| CAN |
CAY |
CAP |
CAX |
359.8 |
0.2 |
| CAN |
CAY |
CAP |
H11 |
179.8 |
180.2 |
| FAE |
CAW |
CAN |
CAM |
180.1 |
180.0 |
| CAN |
CAW |
CAM |
CAX |
0.1 |
0.3 |
| CAN |
CAW |
CAM |
H13 |
180.1 |
180.0 |
| CAY |
CAP |
CAX |
CAM |
359.9 |
0.0 |
| CAY |
CAP |
CAX |
CAH |
181.3 |
180.0 |
| CAX |
CAP |
CAY |
H11 |
180.0 |
180.0 |
| CAN |
CAW |
FAE |
CAM |
179.9 |
180.0 |
| FAE |
CAW |
CAN |
H12 |
359.8 |
0.0 |
| FAE |
CAW |
CAM |
CAX |
180.0 |
180.3 |
| FAE |
CAW |
CAM |
H13 |
360.0 |
0.0 |
| CAM |
CAW |
CAN |
H12 |
179.7 |
180.0 |
| CAP |
CAX |
CAM |
CAW |
0.1 |
359.8 |
| CAW |
CAM |
CAX |
CAH |
178.8 |
179.8 |
| CAX |
CAM |
CAW |
H13 |
180.0 |
180.2 |
| CAY |
CAP |
CAX |
H11 |
180.0 |
180.0 |
| CAW |
CAM |
CAX |
CAP |
0.1 |
359.8 |
| CAM |
CAX |
CAP |
CAH |
178.6 |
180.0 |
| CAP |
CAX |
CAM |
H13 |
180.1 |
180.0 |
| CAP |
CAX |
CAH |
CAG |
313.4 |
180.0 |
| CAP |
CAX |
CAH |
H14 |
133.4 |
360.0 |
| CAW |
CAM |
CAX |
H13 |
180.0 |
179.8 |
| CAP |
CAX |
CAM |
CAH |
181.4 |
180.0 |
| CAM |
CAX |
CAP |
H11 |
179.9 |
180.0 |
| CAM |
CAX |
CAH |
CAG |
134.8 |
0.0 |
| CAM |
CAX |
CAH |
H14 |
314.9 |
180.0 |
| CAP |
CAX |
CAH |
CAM |
178.6 |
180.0 |
| CAH |
CAX |
CAP |
H11 |
1.3 |
0.0 |
| CAH |
CAX |
CAM |
H13 |
358.8 |
360.0 |
| CAX |
CAH |
CAG |
CAF |
167.9 |
180.0 |
| CAG |
CAH |
CAX |
H14 |
180.0 |
180.0 |
| CAX |
CAH |
CAG |
H15 |
348.0 |
360.0 |
| CAX |
CAH |
CAG |
H14 |
180.0 |
180.0 |
| CAH |
CAG |
CAF |
NAA |
82.6 |
109.2 |
| CAF |
CAG |
CAH |
H15 |
180.0 |
180.0 |
| CAF |
CAG |
CAH |
H14 |
347.9 |
360.0 |
| CAH |
CAG |
CAF |
H15 |
180.0 |
180.0 |
| NAA |
CAF |
CAG |
H15 |
262.5 |
289.1 |
| H1 |
NAS |
CBC |
NBD |
179.8 |
180.3 |
| H1 |
NAS |
CBB |
CAK |
180.3 |
180.0 |
| CBB |
CAK |
H2 |
CAL |
180.0 |
180.0 |
| H2 |
CAK |
CAL |
H3 |
0.2 |
0.0 |
| H3 |
CAL |
CAK |
H2 |
0.2 |
0.0 |
| NBD |
CAR |
H4 |
H5 |
117.6 |
120.0 |
| CAQ |
CAR |
H4 |
H5 |
242.3 |
240.0 |
| NBD |
CAR |
H5 |
H4 |
242.4 |
240.0 |
| CAQ |
CAR |
H5 |
H4 |
117.7 |
120.0 |
| OAT |
CAQ |
H6 |
H7 |
120.9 |
239.9 |
| H6 |
CAQ |
CAR |
H4 |
217.5 |
65.0 |
| H6 |
CAQ |
CAR |
H5 |
99.0 |
305.0 |
| OAT |
CAQ |
H7 |
H6 |
239.1 |
120.1 |
| H7 |
CAQ |
CAR |
H4 |
96.9 |
185.0 |
| H7 |
CAQ |
CAR |
H5 |
338.4 |
65.0 |
| H8 |
CAO |
CBA |
CAZ |
180.3 |
180.0 |
| CAV |
CAI |
H9 |
CAJ |
180.0 |
180.0 |
| H9 |
CAI |
CAJ |
CAZ |
179.9 |
180.0 |
| H9 |
CAI |
CAJ |
H10 |
359.9 |
360.0 |
| CAI |
CAJ |
H10 |
CAZ |
180.0 |
180.0 |
| H10 |
CAJ |
CAI |
H9 |
359.9 |
360.0 |
| H10 |
CAJ |
CAZ |
OAU |
359.6 |
0.3 |
| CAY |
CAP |
H11 |
CAX |
180.0 |
180.0 |
| H11 |
CAP |
CAX |
CAM |
179.9 |
180.0 |
| H11 |
CAP |
CAX |
CAH |
1.3 |
0.0 |
| H12 |
CAN |
CAW |
CAM |
179.7 |
180.0 |
| CAW |
CAM |
H13 |
CAX |
180.0 |
180.2 |
| H13 |
CAM |
CAX |
CAH |
358.8 |
360.0 |
| CAX |
CAH |
H14 |
CAG |
180.0 |
180.0 |
| H14 |
CAH |
CAG |
CAF |
347.9 |
360.0 |
| H14 |
CAH |
CAG |
H15 |
167.9 |
180.0 |
| CAH |
CAG |
H15 |
CAF |
180.0 |
180.0 |
| H15 |
CAG |
CAH |
H14 |
167.9 |
180.0 |
| H15 |
CAG |
CAF |
NAA |
262.5 |
289.1 |