PDB Chemical Component 4Z8
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 4Z8
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C24 |
C23 |
1.540 |
1.530 |
| N18 |
C17 |
1.336 |
1.325 |
| N18 |
C19 |
1.332 |
1.325 |
| C17 |
C16 |
1.390 |
1.381 |
| N28 |
C26 |
1.355 |
1.348 |
| N21 |
C19 |
1.379 |
1.384 |
| N21 |
C22 |
1.469 |
1.465 |
| C19 |
N20 |
1.324 |
1.324 |
| C23 |
C26 |
1.523 |
1.506 |
| C23 |
C22 |
1.544 |
1.530 |
| C23 |
C25 |
1.530 |
1.530 |
| C26 |
O27 |
1.222 |
1.213 |
| C16 |
C15 |
1.407 |
1.396 |
| N20 |
C15 |
1.337 |
1.330 |
| C15 |
N14 |
1.392 |
1.387 |
| N14 |
C7 |
1.404 |
1.394 |
| C7 |
C8 |
1.403 |
1.386 |
| C7 |
N6 |
1.333 |
1.328 |
| C8 |
C9 |
1.407 |
1.389 |
| C13 |
C11 |
1.531 |
1.530 |
| C12 |
C11 |
1.534 |
1.530 |
| N6 |
C5 |
1.321 |
1.317 |
| C9 |
N10 |
1.395 |
1.375 |
| C9 |
C4 |
1.423 |
1.409 |
| C11 |
N10 |
1.480 |
1.465 |
| N10 |
C2 |
1.376 |
1.364 |
| C5 |
C4 |
1.401 |
1.394 |
| C4 |
N3 |
1.357 |
1.357 |
| C2 |
N3 |
1.300 |
1.301 |
| C2 |
C1 |
1.510 |
1.507 |
| C5 |
H1 |
1.080 |
1.080 |
| C11 |
H2 |
1.100 |
1.089 |
| C8 |
H3 |
1.080 |
1.079 |
| C12 |
H4 |
1.100 |
1.090 |
| C12 |
H5 |
1.100 |
1.090 |
| C12 |
H6 |
1.100 |
1.090 |
| C13 |
H7 |
1.100 |
1.089 |
| C13 |
H8 |
1.100 |
1.090 |
| C13 |
H9 |
1.100 |
1.090 |
| C1 |
H10 |
1.100 |
1.090 |
| C1 |
H11 |
1.100 |
1.090 |
| C1 |
H12 |
1.100 |
1.090 |
| N14 |
H13 |
1.000 |
0.970 |
| C16 |
H14 |
1.079 |
1.079 |
| C17 |
H15 |
1.080 |
1.080 |
| N21 |
H16 |
1.000 |
0.970 |
| C22 |
H17 |
1.100 |
1.090 |
| C22 |
H18 |
1.100 |
1.091 |
| C24 |
H19 |
1.100 |
1.090 |
| C24 |
H20 |
1.100 |
1.090 |
| C24 |
H21 |
1.100 |
1.090 |
| C25 |
H22 |
1.100 |
1.090 |
| C25 |
H23 |
1.100 |
1.090 |
| C25 |
H24 |
1.100 |
1.091 |
| N28 |
H25 |
1.000 |
0.970 |
| N28 |
H26 |
1.000 |
0.970 |
Bond Angles for 4Z8
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C24 |
C23 |
C26 |
110.5 |
109.5 |
| C24 |
C23 |
C25 |
109.0 |
109.5 |
| N18 |
C17 |
H15 |
120.2 |
120.3 |
| N18 |
C19 |
N20 |
120.9 |
121.6 |
| C17 |
C16 |
H14 |
121.0 |
120.8 |
| C22 |
N21 |
H16 |
106.3 |
120.0 |
| N21 |
C22 |
H17 |
108.6 |
109.5 |
| N21 |
C22 |
H18 |
108.6 |
109.4 |
| C25 |
C23 |
C26 |
108.1 |
109.5 |
| C23 |
C26 |
O27 |
120.7 |
120.0 |
| C23 |
C22 |
H17 |
108.6 |
109.5 |
| C23 |
C22 |
H18 |
108.6 |
109.5 |
| C23 |
C25 |
H22 |
109.5 |
109.5 |
| C23 |
C25 |
H23 |
109.4 |
109.5 |
| C23 |
C25 |
H24 |
109.5 |
109.5 |
| C15 |
N14 |
H13 |
115.4 |
120.0 |
| C8 |
C7 |
N6 |
120.1 |
121.1 |
| C7 |
C8 |
C9 |
119.5 |
118.7 |
| C7 |
C8 |
H3 |
120.3 |
120.7 |
| C8 |
C9 |
N10 |
136.8 |
135.2 |
| C9 |
C8 |
H3 |
120.2 |
120.6 |
| C13 |
C11 |
N10 |
111.8 |
109.4 |
| C13 |
C11 |
H2 |
105.9 |
109.4 |
| C12 |
C11 |
N10 |
113.9 |
109.5 |
| C12 |
C11 |
H2 |
105.8 |
109.5 |
| N6 |
C5 |
H1 |
119.7 |
119.8 |
| C11 |
N10 |
C9 |
128.2 |
126.4 |
| C9 |
N10 |
C2 |
106.9 |
107.3 |
| C9 |
C4 |
N3 |
107.3 |
106.9 |
| C11 |
N10 |
C2 |
124.9 |
126.3 |
| N10 |
C11 |
H2 |
106.4 |
109.5 |
| C5 |
C4 |
N3 |
133.6 |
134.4 |
| C2 |
C1 |
H10 |
109.5 |
109.5 |
| C2 |
C1 |
H11 |
109.5 |
109.5 |
| C2 |
C1 |
H12 |
109.5 |
109.5 |
| H4 |
C12 |
H5 |
109.5 |
109.5 |
| H4 |
C12 |
H6 |
109.5 |
109.4 |
| H5 |
C12 |
H6 |
109.5 |
109.5 |
| H7 |
C13 |
H8 |
109.5 |
109.5 |
| H7 |
C13 |
H9 |
109.5 |
109.5 |
| H8 |
C13 |
H9 |
109.5 |
109.4 |
| H10 |
C1 |
H11 |
109.5 |
109.5 |
| H10 |
C1 |
H12 |
109.4 |
109.5 |
| H11 |
C1 |
H12 |
109.4 |
109.5 |
| H17 |
C22 |
H18 |
109.4 |
109.4 |
| H19 |
C24 |
H20 |
109.5 |
109.5 |
| H19 |
C24 |
H21 |
109.4 |
109.5 |
| H20 |
C24 |
H21 |
109.4 |
109.5 |
| H22 |
C25 |
H23 |
109.5 |
109.5 |
| H22 |
C25 |
H24 |
109.5 |
109.5 |
| H23 |
C25 |
H24 |
109.5 |
109.4 |
| H25 |
N28 |
H26 |
120.0 |
120.0 |
Torsion Angles for 4Z8
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C25 |
C23 |
C24 |
C26 |
118.7 |
120.0 |
| C24 |
C23 |
C26 |
O27 |
199.2 |
240.0 |
| C24 |
C23 |
C22 |
H17 |
199.7 |
180.0 |
| C24 |
C23 |
C22 |
H18 |
80.7 |
60.0 |
| C24 |
C23 |
C25 |
H22 |
180.0 |
300.0 |
| C24 |
C23 |
C25 |
H23 |
300.0 |
60.0 |
| C24 |
C23 |
C25 |
H24 |
60.0 |
179.9 |
| N18 |
C17 |
C16 |
H14 |
179.8 |
180.0 |
| C19 |
N18 |
C17 |
H15 |
180.9 |
180.0 |
| C23 |
C22 |
N21 |
H17 |
239.5 |
239.9 |
| C23 |
C22 |
N21 |
H18 |
120.5 |
120.0 |
| H17 |
C22 |
N21 |
H18 |
241.0 |
240.1 |
| C24 |
C23 |
C26 |
C25 |
119.2 |
120.0 |
| C26 |
C23 |
C22 |
H17 |
77.0 |
60.0 |
| C26 |
C23 |
C22 |
H18 |
318.0 |
300.0 |
| C26 |
C23 |
C25 |
H22 |
300.2 |
60.0 |
| C26 |
C23 |
C25 |
H23 |
60.2 |
180.0 |
| C26 |
C23 |
C25 |
H24 |
180.2 |
300.0 |
| C23 |
C22 |
N21 |
H16 |
57.9 |
360.0 |
| N21 |
C22 |
C23 |
H17 |
120.5 |
120.1 |
| N21 |
C22 |
C23 |
H18 |
239.5 |
240.0 |
| H17 |
C22 |
C23 |
H18 |
119.0 |
120.0 |
| C24 |
C23 |
C25 |
C26 |
239.8 |
240.0 |
| C25 |
C23 |
C26 |
O27 |
80.0 |
120.0 |
| C25 |
C23 |
C22 |
H17 |
319.1 |
300.0 |
| C25 |
C23 |
C22 |
H18 |
200.1 |
180.0 |
| H22 |
C25 |
C23 |
H23 |
240.0 |
240.0 |
| H22 |
C25 |
C23 |
H24 |
120.0 |
120.0 |
| H23 |
C25 |
C23 |
H24 |
240.0 |
240.0 |
| C16 |
C15 |
N14 |
H13 |
330.6 |
5.6 |
| N20 |
C15 |
N14 |
H13 |
149.4 |
185.3 |
| N14 |
C7 |
C8 |
H3 |
360.0 |
359.5 |
| C7 |
C8 |
C9 |
N10 |
179.1 |
179.8 |
| C9 |
C8 |
C7 |
H3 |
180.0 |
180.4 |
| N6 |
C7 |
C8 |
C9 |
1.1 |
0.4 |
| N6 |
C7 |
C8 |
H3 |
181.1 |
180.0 |
| C7 |
N6 |
C5 |
H1 |
178.4 |
180.0 |
| C9 |
C8 |
C7 |
N6 |
1.1 |
0.4 |
| C7 |
C8 |
C9 |
H3 |
180.0 |
179.6 |
| C11 |
N10 |
C9 |
C8 |
1.1 |
0.1 |
| C8 |
C9 |
N10 |
C2 |
179.3 |
180.3 |
| C8 |
C9 |
C4 |
N3 |
180.7 |
180.0 |
| C12 |
C11 |
C13 |
N10 |
129.5 |
120.0 |
| C12 |
C11 |
C13 |
H2 |
245.0 |
240.0 |
| C13 |
C11 |
N10 |
C9 |
71.5 |
56.1 |
| C13 |
C11 |
N10 |
C2 |
253.6 |
235.9 |
| N10 |
C11 |
C13 |
H2 |
115.5 |
120.0 |
| C13 |
C11 |
C12 |
N10 |
231.6 |
240.0 |
| C13 |
C11 |
C12 |
H2 |
115.1 |
120.0 |
| C12 |
C11 |
N10 |
C9 |
302.9 |
296.2 |
| C12 |
C11 |
N10 |
C2 |
125.0 |
115.9 |
| N10 |
C11 |
C12 |
H2 |
243.4 |
239.9 |
| N10 |
C9 |
C8 |
H3 |
359.1 |
0.2 |
| N10 |
C9 |
C4 |
N3 |
0.5 |
0.0 |
| C11 |
N10 |
C9 |
C2 |
181.8 |
179.8 |
| C9 |
N10 |
C11 |
H2 |
186.6 |
176.1 |
| C5 |
C4 |
C9 |
N3 |
179.3 |
179.8 |
| C8 |
C9 |
N10 |
C11 |
1.1 |
0.1 |
| C13 |
C11 |
N10 |
H2 |
244.9 |
240.0 |
| C12 |
C11 |
N10 |
H2 |
116.2 |
120.0 |
| C9 |
N10 |
C11 |
C2 |
177.9 |
180.3 |
| C11 |
N10 |
C2 |
C9 |
178.3 |
180.2 |
| C2 |
N10 |
C11 |
H2 |
8.8 |
355.9 |
| N10 |
C2 |
C1 |
H10 |
180.0 |
264.7 |
| N10 |
C2 |
C1 |
H11 |
300.0 |
24.7 |
| N10 |
C2 |
C1 |
H12 |
59.9 |
144.7 |
| C9 |
C4 |
C5 |
N3 |
181.0 |
180.3 |
| C9 |
N10 |
C2 |
N3 |
0.3 |
359.6 |
| C11 |
N10 |
C2 |
N3 |
178.6 |
179.8 |
| C9 |
N10 |
C2 |
C1 |
180.4 |
180.0 |
| C11 |
N10 |
C2 |
C1 |
358.6 |
0.3 |
| H10 |
C1 |
C2 |
H11 |
240.0 |
240.0 |
| H10 |
C1 |
C2 |
H12 |
120.0 |
120.0 |
| H11 |
C1 |
C2 |
H12 |
240.0 |
240.0 |
| H1 |
C5 |
C4 |
N3 |
0.5 |
0.0 |
| C13 |
C11 |
H2 |
N10 |
119.1 |
120.0 |
| C12 |
C11 |
H2 |
N10 |
238.5 |
240.0 |
| H2 |
C11 |
N10 |
C9 |
186.6 |
176.1 |
| H2 |
C11 |
N10 |
C2 |
8.8 |
355.9 |
| H3 |
C8 |
C7 |
N6 |
181.1 |
180.0 |
| C7 |
C8 |
H3 |
C9 |
180.0 |
180.4 |
| H3 |
C8 |
C9 |
N10 |
359.1 |
0.2 |
| H4 |
C12 |
C11 |
N10 |
308.4 |
65.0 |
| H4 |
C12 |
C11 |
H2 |
64.9 |
185.0 |
| H5 |
C12 |
H4 |
H6 |
120.0 |
120.0 |
| H5 |
C12 |
C11 |
N10 |
68.4 |
185.0 |
| H5 |
C12 |
C11 |
H2 |
184.9 |
305.1 |
| H4 |
C12 |
H5 |
H6 |
240.0 |
240.0 |
| H6 |
C12 |
C11 |
N10 |
188.3 |
305.0 |
| H6 |
C12 |
C11 |
H2 |
304.9 |
65.1 |
| H4 |
C12 |
H6 |
H5 |
120.0 |
120.0 |
| H7 |
C13 |
C11 |
N10 |
50.5 |
60.1 |
| H7 |
C13 |
C11 |
H2 |
295.0 |
300.0 |
| H8 |
C13 |
H7 |
H9 |
120.0 |
120.0 |
| H8 |
C13 |
C11 |
N10 |
170.5 |
180.1 |
| H8 |
C13 |
C11 |
H2 |
55.0 |
60.0 |
| H7 |
C13 |
H8 |
H9 |
240.0 |
240.0 |
| H9 |
C13 |
C11 |
N10 |
290.5 |
300.0 |
| H9 |
C13 |
C11 |
H2 |
175.0 |
180.0 |
| H7 |
C13 |
H9 |
H8 |
120.0 |
120.0 |
| C2 |
C1 |
H10 |
H11 |
120.0 |
120.0 |
| C2 |
C1 |
H10 |
H12 |
240.0 |
240.0 |
| H11 |
C1 |
H10 |
H12 |
120.0 |
120.0 |
| C2 |
C1 |
H11 |
H10 |
239.9 |
240.0 |
| C2 |
C1 |
H11 |
H12 |
120.0 |
120.0 |
| H10 |
C1 |
H11 |
H12 |
240.0 |
240.0 |
| C2 |
C1 |
H12 |
H10 |
120.1 |
120.0 |
| C2 |
C1 |
H12 |
H11 |
240.0 |
240.0 |
| H10 |
C1 |
H12 |
H11 |
120.0 |
120.0 |
| H15 |
C17 |
C16 |
H14 |
359.8 |
0.0 |
| H16 |
N21 |
C22 |
H17 |
178.4 |
120.1 |
| H16 |
N21 |
C22 |
H18 |
297.4 |
240.0 |
| H17 |
C22 |
N21 |
H16 |
178.4 |
120.1 |
| N21 |
C22 |
H17 |
H18 |
118.5 |
119.9 |
| C23 |
C22 |
H17 |
H18 |
241.5 |
240.0 |
| H18 |
C22 |
N21 |
H16 |
297.4 |
240.0 |
| N21 |
C22 |
H18 |
H17 |
241.5 |
240.0 |
| C23 |
C22 |
H18 |
H17 |
118.5 |
120.0 |
| H19 |
C24 |
C23 |
C26 |
180.0 |
60.0 |
| H19 |
C24 |
C23 |
C25 |
298.7 |
180.0 |
| H20 |
C24 |
H19 |
H21 |
120.0 |
120.0 |
| H20 |
C24 |
C23 |
C26 |
300.0 |
180.0 |
| H20 |
C24 |
C23 |
C25 |
58.7 |
300.0 |
| H19 |
C24 |
H20 |
H21 |
240.0 |
240.0 |
| H21 |
C24 |
C23 |
C26 |
60.0 |
300.0 |
| H21 |
C24 |
C23 |
C25 |
178.7 |
60.0 |
| H19 |
C24 |
H21 |
H20 |
120.0 |
120.0 |
| H22 |
C25 |
C23 |
C26 |
300.2 |
60.0 |
| C23 |
C25 |
H22 |
H23 |
120.0 |
120.0 |
| C23 |
C25 |
H22 |
H24 |
240.0 |
240.0 |
| H23 |
C25 |
H22 |
H24 |
120.0 |
120.0 |
| H23 |
C25 |
C23 |
C26 |
60.2 |
180.0 |
| C23 |
C25 |
H23 |
H22 |
240.0 |
240.0 |
| C23 |
C25 |
H23 |
H24 |
120.0 |
120.0 |
| H22 |
C25 |
H23 |
H24 |
240.0 |
240.0 |
| H24 |
C25 |
C23 |
C26 |
180.2 |
300.0 |
| C23 |
C25 |
H24 |
H22 |
120.0 |
120.0 |
| C23 |
C25 |
H24 |
H23 |
240.1 |
240.0 |
| H22 |
C25 |
H24 |
H23 |
120.0 |
120.0 |