PDB Chemical Component 4YK

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 4YK

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
CAT	OAS	1.457	1.429
OAS	CAQ	1.402	1.359
CAQ	CAR	1.406	1.385
CAQ	CAP	1.405	1.392
CAR	CAM	1.418	1.390
CAM	NAC	1.446	1.382
CAM	CAN	1.429	1.401
NAC	CAL	1.437	1.341
CAL	OAB	1.260	1.218
CAL	CAK	1.369	1.425
CAK	SAA	1.669	1.757
CAK	CAD	1.397	1.374
SAA	CAJ	1.500	1.756
CAJ	CAI	1.327	1.403
CAJ	CAE	1.387	1.392
CAI	CAH	1.374	1.374
CAH	CAG	1.390	1.389
CAG	CAF	1.394	1.362
CAF	CAE	1.332	1.412
CAE	CAD	1.376	1.465
CAD	CAN	1.383	1.484
CAN	CAO	1.410	1.396
CAO	CAP	1.403	1.366
CAT	H1	1.100	1.090
CAT	H2	1.100	1.089
CAT	H3	1.100	1.090
CAR	H4	1.080	1.080
NAC	H5	1.000	0.970
CAI	H6	1.080	1.079
CAH	H7	1.080	1.080
CAG	H9	1.080	1.080
CAF	H10	1.080	1.080
CAO	H11	1.081	1.081
CAP	H12	1.079	1.080

Bond Angles for 4YK

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
CAT	OAS	CAQ	122.1	116.9
OAS	CAT	H1	109.5	109.5
OAS	CAT	H2	109.5	109.5
OAS	CAT	H3	109.5	109.4
OAS	CAQ	CAR	119.8	119.7
OAS	CAQ	CAP	124.2	119.8
CAR	CAQ	CAP	116.0	120.6
CAQ	CAR	CAM	122.4	119.6
CAQ	CAR	H4	118.8	120.2
CAQ	CAP	CAO	122.1	120.4
CAQ	CAP	H12	118.9	119.8
CAR	CAM	NAC	118.9	120.8
CAR	CAM	CAN	121.3	119.5
CAM	CAR	H4	118.8	120.2
NAC	CAM	CAN	119.7	119.8
CAM	NAC	CAL	119.7	121.3
CAM	NAC	H5	120.2	119.4
CAM	CAN	CAD	119.6	119.3
CAM	CAN	CAO	115.2	120.2
NAC	CAL	OAB	121.6	119.0
NAC	CAL	CAK	116.5	122.0
CAL	NAC	H5	120.2	119.3
OAB	CAL	CAK	121.9	119.0
CAL	CAK	SAA	126.7	129.6
CAL	CAK	CAD	125.7	119.6
SAA	CAK	CAD	107.7	110.7
CAK	SAA	CAJ	98.4	92.8
CAK	CAD	CAE	109.3	113.3
CAK	CAD	CAN	118.9	118.0
SAA	CAJ	CAI	123.2	130.0
SAA	CAJ	CAE	110.7	110.4
CAI	CAJ	CAE	126.1	119.6
CAJ	CAI	CAH	118.1	120.2
CAJ	CAI	H6	120.9	119.9
CAJ	CAE	CAF	115.9	119.1
CAJ	CAE	CAD	114.0	112.6
CAI	CAH	CAG	118.1	120.2
CAH	CAI	H6	121.0	119.9
CAI	CAH	H7	121.0	119.9
CAH	CAG	CAF	120.9	120.5
CAG	CAH	H7	121.0	119.9
CAH	CAG	H9	119.6	119.8
CAG	CAF	CAE	120.9	120.4
CAF	CAG	H9	119.5	119.7
CAG	CAF	H10	119.5	119.8
CAF	CAE	CAD	130.1	128.3
CAE	CAF	H10	119.5	119.8
CAE	CAD	CAN	131.8	128.7
CAD	CAN	CAO	125.2	120.4
CAN	CAO	CAP	122.9	119.7
CAN	CAO	H11	118.5	120.2
CAP	CAO	H11	118.6	120.1
CAO	CAP	H12	118.9	119.8
H1	CAT	H2	109.5	109.5
H1	CAT	H3	109.4	109.5
H2	CAT	H3	109.5	109.4

Torsion Angles for 4YK

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
CAT	OAS	CAQ	CAR	173.4	180.0
CAT	OAS	CAQ	CAP	352.9	359.7
H1	CAT	OAS	H2	240.0	239.9
H1	CAT	OAS	H3	120.0	120.0
H2	CAT	OAS	H3	240.0	240.1
CAQ	OAS	CAT	H1	180.0	300.0
CAQ	OAS	CAT	H2	300.0	60.1
CAQ	OAS	CAT	H3	60.0	180.0
CAR	CAQ	OAS	CAP	180.5	180.3
OAS	CAQ	CAR	CAM	179.9	180.0
OAS	CAQ	CAR	H4	359.9	360.0
OAS	CAQ	CAP	CAO	180.4	179.8
OAS	CAQ	CAP	H12	0.4	0.0
OAS	CAQ	CAR	CAP	179.5	179.7
CAR	CAQ	CAP	CAO	359.9	359.4
CAR	CAQ	CAP	H12	179.9	179.7
CAQ	CAR	CAM	NAC	180.1	180.0
CAQ	CAR	CAM	CAN	0.1	360.0
CAM	CAR	CAQ	H4	180.0	180.0
OAS	CAQ	CAP	CAR	180.5	180.3
CAP	CAQ	CAR	CAM	0.4	0.3
CAP	CAQ	CAR	H4	180.4	180.3
CAN	CAO	CAP	CAQ	359.4	0.5
CAQ	CAP	CAO	H11	179.4	180.3
CAO	CAP	CAQ	H12	180.0	179.7
CAM	CAR	CAQ	CAP	0.4	0.3
CAQ	CAR	CAM	H4	180.0	180.0
NAC	CAM	CAR	CAN	180.0	180.0
CAR	CAM	NAC	CAL	180.4	180.0
CAR	CAM	NAC	H5	0.4	360.0
CAR	CAM	CAN	CAD	179.7	180.0
CAR	CAM	CAN	CAO	359.3	-0.0
CAR	CAM	NAC	CAN	180.0	180.0
NAC	CAM	CAR	H4	0.1	-0.0
NAC	CAM	CAN	CAD	359.7	-0.0
NAC	CAM	CAN	CAO	179.2	180.0
CAM	NAC	CAL	OAB	179.3	180.1
CAM	NAC	CAL	CAK	359.6	-0.0
CAL	NAC	CAM	H5	180.0	180.0
CAR	CAM	CAN	NAC	180.0	180.0
CAN	CAM	CAR	H4	180.1	180.0
CAN	CAM	NAC	CAL	0.4	-0.0
CAN	CAM	NAC	H5	180.5	180.0
CAK	CAD	CAN	CAM	0.2	-0.0
CAE	CAD	CAN	CAM	179.4	180.0
CAD	CAN	CAM	CAO	180.4	180.0
CAM	CAN	CAO	CAP	1.0	359.8
CAM	CAN	CAO	H11	181.0	179.9
CAL	NAC	CAM	CAN	0.4	-0.0
CAM	NAC	CAL	H5	180.0	180.0
OAB	CAL	NAC	CAK	179.8	180.1
NAC	CAL	CAK	SAA	180.8	180.0
NAC	CAL	CAK	CAD	0.4	-0.0
NAC	CAL	OAB	CAK	180.2	179.9
OAB	CAL	NAC	H5	359.3	0.1
OAB	CAL	CAK	SAA	1.0	359.9
OAB	CAL	CAK	CAD	180.6	179.9
NAC	CAL	CAK	OAB	179.8	180.1
CAK	CAL	NAC	H5	179.5	180.0
SAA	CAK	CAL	CAD	180.4	180.0
CAL	CAK	SAA	CAJ	179.6	180.0
CAL	CAK	CAD	CAE	180.4	180.0
CAL	CAK	CAD	CAN	359.8	-0.0
CAL	CAK	SAA	CAD	179.7	180.0
SAA	CAK	CAD	CAE	0.0	-0.0
SAA	CAK	CAD	CAN	179.4	180.0
CAK	SAA	CAJ	CAI	180.2	180.1
CAK	SAA	CAJ	CAE	360.0	359.9
CAM	CAN	CAD	CAK	0.2	-0.0
CAL	CAK	CAD	SAA	180.3	180.0
CAD	CAK	SAA	CAJ	360.0	0.0
CAJ	CAE	CAD	CAK	359.9	360.0
CAF	CAE	CAD	CAK	179.9	180.0
CAE	CAD	CAK	CAN	180.6	180.0
CAK	CAD	CAN	CAO	180.7	180.0
CAJ	SAA	CAK	CAD	360.0	0.0
CAI	CAJ	SAA	CAE	180.3	180.1
SAA	CAJ	CAI	CAH	180.0	179.9
SAA	CAJ	CAI	H6	0.0	359.8
SAA	CAJ	CAE	CAF	180.1	180.0
SAA	CAJ	CAE	CAD	0.0	0.1
SAA	CAJ	CAI	CAE	179.7	179.9
CAI	CAJ	CAE	CAF	359.8	359.9
CAI	CAJ	CAE	CAD	179.8	179.9
CAJ	CAI	CAH	CAG	360.0	360.0
CAH	CAI	CAJ	H6	180.0	180.1
CAJ	CAI	CAH	H7	180.0	180.0
CAK	CAD	CAE	CAJ	359.9	360.0
SAA	CAJ	CAE	CAI	180.3	180.1
CAE	CAJ	CAI	CAH	0.3	0.1
CAE	CAJ	CAI	H6	180.3	180.0
CAG	CAF	CAE	CAJ	359.8	0.0
CAF	CAE	CAJ	CAD	180.1	180.0
CAJ	CAE	CAF	H10	179.8	180.0
CAJ	CAE	CAD	CAN	180.7	180.0
CAH	CAI	CAJ	CAE	0.3	0.1
CAJ	CAI	CAH	H6	180.0	179.9
CAI	CAH	CAG	CAF	359.7	-0.0
CAG	CAH	CAI	H7	180.0	180.0
CAI	CAH	CAG	H9	179.7	180.0
CAG	CAH	CAI	H6	179.9	180.1
CAI	CAH	CAG	H7	180.0	180.0
CAH	CAG	CAF	CAE	0.4	-0.0
CAF	CAG	CAH	H9	180.0	180.0
CAH	CAG	CAF	H10	180.4	180.0
CAJ	CAE	CAF	CAG	359.8	0.0
CAF	CAG	CAH	H7	179.7	180.0
CAH	CAG	CAF	H9	180.0	180.0
CAG	CAF	CAE	CAD	179.9	180.0
CAE	CAF	CAG	H10	180.0	180.0
CAK	CAD	CAE	CAF	179.9	180.0
CAJ	CAE	CAF	CAD	179.9	180.0
CAE	CAF	CAG	H9	180.4	180.0
CAG	CAF	CAE	H10	180.0	180.0
CAF	CAE	CAD	CAN	0.6	-0.0
CAM	CAN	CAD	CAE	179.4	180.0
CAK	CAD	CAE	CAN	179.3	180.0
CAJ	CAE	CAD	CAF	180.1	180.0
CAD	CAE	CAF	H10	359.9	-0.0
CAE	CAD	CAN	CAO	359.9	-0.0
CAM	CAN	CAD	CAO	179.5	180.0
CAK	CAD	CAN	CAE	180.8	180.0
CAD	CAN	CAO	CAP	180.6	179.8
CAD	CAN	CAO	H11	0.6	359.9
CAQ	CAP	CAO	CAN	359.4	0.5
CAM	CAN	CAO	CAD	180.5	180.0
CAP	CAO	CAN	H11	180.0	179.8
CAN	CAO	CAP	H12	179.4	180.2
CAQ	CAP	CAO	H12	180.0	180.3
CAN	CAO	CAP	H11	180.0	180.2
H1	CAT	OAS	CAQ	180.0	300.0
OAS	CAT	H1	H2	120.0	120.0
OAS	CAT	H1	H3	240.0	240.1
H2	CAT	H1	H3	120.0	120.0
H2	CAT	OAS	CAQ	300.0	60.1
OAS	CAT	H2	H1	240.0	239.9
OAS	CAT	H2	H3	120.0	119.9
H1	CAT	H2	H3	240.0	240.0
H3	CAT	OAS	CAQ	60.0	180.0
OAS	CAT	H3	H1	120.0	120.0
OAS	CAT	H3	H2	240.0	240.1
H1	CAT	H3	H2	120.0	120.1
H4	CAR	CAQ	CAP	180.4	180.3
CAQ	CAR	H4	CAM	180.0	180.0
H4	CAR	CAM	NAC	0.1	360.0
H4	CAR	CAM	CAN	180.1	180.0
H5	NAC	CAM	CAN	180.5	180.0
CAM	NAC	H5	CAL	180.0	180.0
H5	NAC	CAL	OAB	359.3	0.1
H5	NAC	CAL	CAK	179.5	180.0
H6	CAI	CAJ	CAE	180.3	180.0
CAJ	CAI	H6	CAH	180.0	180.1
H6	CAI	CAH	CAG	179.9	180.1
H6	CAI	CAH	H7	360.0	0.1
CAI	CAH	H7	CAG	180.0	180.0
H7	CAH	CAI	H6	360.0	0.1
H7	CAH	CAG	CAF	179.7	180.0
H7	CAH	CAG	H9	359.7	360.0
CAH	CAG	H9	CAF	180.0	180.0
H9	CAG	CAH	H7	359.7	360.0
H9	CAG	CAF	CAE	180.4	180.0
H9	CAG	CAF	H10	0.4	-0.0
CAG	CAF	H10	CAE	180.0	180.0
H10	CAF	CAG	H9	0.4	360.0
H10	CAF	CAE	CAD	359.9	-0.0
CAN	CAO	H11	CAP	180.0	179.8
H11	CAO	CAP	H12	359.4	0.1
CAQ	CAP	H12	CAO	180.0	179.7
H12	CAP	CAO	H11	359.4	0.1