PDB Chemical Component 4XB

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 4XB

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C	C1	1.539	1.507
N	C10	1.489	1.469
N	C11	1.462	1.469
O	C2	1.357	1.352
O	C3	1.358	1.348
C1	C2	1.496	1.359
C1	C13	1.390	1.417
O1	C7	1.384	1.358
O1	C8	1.445	1.429
C2	C14	1.457	1.466
O2	C14	1.213	1.216
C3	C4	1.395	1.389
C3	C13	1.408	1.408
C4	C5	1.404	1.380
C5	C6	1.392	1.386
C6	C7	1.389	1.383
C7	C13	1.393	1.403
C8	C9	1.515	1.531
C8	C12	1.543	1.531
C9	C10	1.505	1.529
C11	C12	1.510	1.530
C14	OAR	1.411	1.349
C15	OAQ	1.448	1.430
C19	C20	1.521	1.507
C19	OAR	1.406	1.451
C20	C21	1.407	1.382
C20	C25	1.361	1.381
C21	C22	1.405	1.382
C22	C23	1.394	1.382
C23	C24	1.400	1.388
C24	C25	1.428	1.388
C24	OAQ	1.383	1.358
C	H	1.100	1.089
C	HA	1.100	1.090
C	HB	1.100	1.091
N	HN	1.000	1.008
C4	H4	1.079	1.081
C5	H5	1.080	1.079
C6	H6	1.080	1.079
C8	H8	1.100	1.090
C9	H9	1.100	1.091
C9	H9A	1.100	1.090
C10	H10	1.100	1.090
C10	H10A	1.100	1.090
C11	H11	1.100	1.090
C11	H11A	1.100	1.090
C12	H12	1.100	1.090
C12	H12A	1.100	1.090
C15	H15	1.099	1.090
C15	H15A	1.100	1.090
C15	H15B	1.100	1.090
C19	H19	1.100	1.090
C19	H19A	1.100	1.090
C21	H21	1.080	1.081
C22	H22	1.080	1.080
C23	H23	1.080	1.080
C25	H25	1.080	1.081

Bond Angles for 4XB

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C	C1	C2	136.2	126.5
C	C1	C13	119.5	126.5
C1	C	H	109.5	109.5
C1	C	HA	109.5	109.5
C1	C	HB	109.5	109.5
C10	N	C11	112.8	111.2
N	C10	C9	108.4	109.6
C10	N	HN	108.6	111.0
N	C10	H10	109.7	109.4
N	C10	H10A	109.7	109.4
N	C11	C12	107.3	109.5
C11	N	HN	108.6	111.0
N	C11	H11	110.0	109.5
N	C11	H11A	110.0	109.5
C2	O	C3	103.4	109.8
O	C2	C1	111.7	109.4
O	C2	C14	115.0	125.3
O	C3	C4	122.5	133.1
O	C3	C13	115.4	107.5
C2	C1	C13	104.1	107.0
C1	C2	C14	132.6	125.3
C1	C13	C3	105.3	106.3
C1	C13	C7	134.6	133.8
C7	O1	C8	117.6	117.0
O1	C7	C6	123.1	120.2
O1	C7	C13	119.3	120.2
O1	C8	C9	108.1	109.5
O1	C8	C12	110.9	109.5
O1	C8	H8	109.1	109.5
C2	C14	O2	119.8	120.0
C2	C14	OAR	117.4	120.0
O2	C14	OAR	122.5	120.0
C4	C3	C13	122.0	119.4
C3	C4	C5	117.5	120.2
C3	C4	H4	121.3	119.9
C3	C13	C7	120.0	119.9
C4	C5	C6	119.7	120.7
C5	C4	H4	121.2	119.9
C4	C5	H5	120.1	119.6
C5	C6	C7	122.9	120.3
C6	C5	H5	120.2	119.6
C5	C6	H6	118.5	119.9
C6	C7	C13	117.6	119.5
C7	C6	H6	118.5	119.9
C9	C8	C12	112.5	109.2
C8	C9	C10	108.0	109.3
C9	C8	H8	108.2	109.6
C8	C9	H9	109.9	109.5
C8	C9	H9A	109.8	109.5
C8	C12	C11	110.3	109.3
C12	C8	H8	107.9	109.6
C8	C12	H12	109.3	109.5
C8	C12	H12A	109.3	109.5
C10	C9	H9	109.8	109.5
C10	C9	H9A	109.9	109.6
C9	C10	H10	109.7	109.5
C9	C10	H10A	109.8	109.5
C12	C11	H11	110.1	109.4
C12	C11	H11A	110.0	109.5
C11	C12	H12	109.2	109.5
C11	C12	H12A	109.3	109.5
C14	OAR	C19	119.6	117.0
C15	OAQ	C24	117.8	117.0
OAQ	C15	H15	109.5	109.5
OAQ	C15	H15A	109.4	109.4
OAQ	C15	H15B	109.5	109.4
C20	C19	OAR	108.8	109.5
C19	C20	C21	124.2	120.0
C19	C20	C25	117.4	120.0
C20	C19	H19	109.6	109.5
C20	C19	H19A	109.6	109.5
OAR	C19	H19	109.7	109.5
OAR	C19	H19A	109.6	109.5
C21	C20	C25	118.3	120.0
C20	C21	C22	120.7	120.1
C20	C21	H21	119.6	119.9
C20	C25	C24	120.5	120.0
C20	C25	H25	119.8	120.0
C21	C22	C23	122.3	120.1
C22	C21	H21	119.7	119.9
C21	C22	H22	118.9	120.0
C22	C23	C24	115.7	119.9
C23	C22	H22	118.9	120.0
C22	C23	H23	122.1	120.0
C23	C24	C25	122.4	119.9
C23	C24	OAQ	117.4	120.1
C24	C23	H23	122.2	120.1
C25	C24	OAQ	120.2	120.1
C24	C25	H25	119.8	120.0
H	C	HA	109.4	109.5
H	C	HB	109.5	109.5
HA	C	HB	109.5	109.4
H9	C9	H9A	109.5	109.5
H10	C10	H10A	109.5	109.5
H11	C11	H11A	109.4	109.5
H12	C12	H12A	109.5	109.5
H15	C15	H15A	109.5	109.5
H15	C15	H15B	109.5	109.5
H15A	C15	H15B	109.4	109.5
H19	C19	H19A	109.5	109.4

Torsion Angles for 4XB

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O	C2	C1	C	179.0	180.0
C2	C1	C	C13	184.8	180.0
C	C1	C2	C14	348.8	0.1
C	C1	C13	C3	181.7	180.0
C	C1	C13	C7	1.5	0.0
H	C	C1	HA	240.0	240.0
H	C	C1	HB	120.0	120.0
HA	C	C1	HB	240.0	240.1
C10	N	C11	C12	296.8	61.7
C11	N	C10	HN	239.5	235.9
C10	N	C11	H11	56.5	181.7
C10	N	C11	H11A	177.1	301.7
C8	C9	C10	N	301.4	59.2
N	C10	C9	H9	181.7	299.2
N	C10	C9	H9A	61.2	179.1
C9	C10	N	H10	240.2	240.0
C9	C10	N	H10A	119.8	120.1
H10	C10	N	H10A	239.7	240.1
C11	N	C10	C9	65.8	298.3
C10	N	C11	HN	120.5	124.1
C11	N	C10	H10	185.6	58.3
C11	N	C10	H10A	306.0	178.2
C8	C12	C11	N	55.7	300.8
C12	C11	N	H11	240.3	240.0
C12	C11	N	H11A	119.7	120.0
N	C11	C12	H12	295.6	180.9
N	C11	C12	H12A	175.8	60.8
H11	C11	N	H11A	239.4	240.0
C	C1	C2	O	179.0	180.0
C2	O	C3	C4	180.0	179.9
C2	O	C3	C13	2.4	360.0
O	C2	C1	C13	3.4	360.0
C1	C2	O	C14	171.7	180.0
O	C2	C14	O2	6.6	180.1
O	C2	C14	OAR	181.3	0.1
C3	O	C2	C1	356.6	0.0
C3	O	C2	C14	184.8	180.0
C1	C13	C3	O	359.7	0.0
C4	C3	O	C13	177.6	180.0
O	C3	C4	C5	177.8	180.0
O	C3	C4	H4	357.7	360.0
O	C3	C13	C7	179.9	180.0
C	C1	C2	C13	175.7	180.0
C2	C1	C	H	93.1	90.0
C2	C1	C	HA	213.1	210.1
C2	C1	C	HB	333.1	330.0
C1	C2	O	C3	356.6	0.0
O	C2	C1	C14	190.2	180.0
C2	C1	C13	C3	358.3	0.0
C2	C1	C13	C7	178.0	180.0
C1	C2	C14	O2	197.1	0.0
C1	C2	C14	OAR	11.8	180.0
C	C1	C13	C2	183.4	180.0
C13	C1	C	H	268.3	270.1
C13	C1	C	HA	28.3	30.1
C13	C1	C	HB	148.3	150.0
O	C3	C13	C1	359.7	0.0
C13	C1	C2	C14	173.2	180.0
O1	C7	C13	C1	0.7	360.0
C4	C3	C13	C1	182.1	180.0
C3	C13	C1	C7	180.3	180.0
C6	C7	C13	C1	180.3	180.0
C1	C13	C7	O1	0.7	360.0
C7	O1	C8	C9	285.3	204.7
C7	O1	C8	C12	161.6	85.0
C7	O1	C8	H8	42.9	324.8
C3	C13	C7	O1	180.4	180.0
C5	C6	C7	O1	180.1	180.0
C6	C7	O1	C13	180.4	180.0
O1	C7	C6	H6	0.1	0.0
C8	O1	C7	C6	331.0	354.6
C8	O1	C7	C13	150.6	174.6
C9	C8	O1	C12	123.7	119.7
O1	C8	C9	C10	292.6	182.5
C9	C8	O1	H8	242.5	239.8
O1	C8	C9	H9	52.3	302.4
O1	C8	C9	H9A	172.8	62.5
O1	C8	C12	C11	66.4	177.5
C12	C8	O1	H8	118.7	120.2
O1	C8	C12	H12	186.5	297.4
O1	C8	C12	H12A	306.3	57.6
C14	C2	O	C3	184.8	180.0
O	C2	C14	C1	169.6	180.0
C14	C2	C1	C13	173.2	180.0
O2	C14	C2	OAR	185.3	180.0
C2	C14	OAR	C19	195.2	180.0
C2	C14	O2	OAR	174.4	180.0
O2	C14	OAR	C19	9.8	360.0
O	C3	C4	C13	182.6	180.0
C1	C13	C3	C4	182.1	180.0
C4	C3	C13	C7	2.3	0.0
C3	C4	C5	C6	5.1	0.0
C5	C4	C3	H4	180.0	180.0
C3	C4	C5	H5	185.1	179.9
O	C3	C13	C4	177.6	180.0
C1	C13	C3	C7	179.8	180.0
O1	C7	C13	C3	180.4	180.0
C13	C3	C4	C5	355.2	360.0
C13	C3	C4	H4	175.2	180.0
C6	C7	C13	C3	359.9	0.0
C5	C4	C3	C13	355.2	360.0
C3	C4	C5	H4	180.0	180.0
C4	C5	C6	C7	356.8	360.0
C6	C5	C4	H5	180.0	180.1
C4	C5	C6	H6	176.8	180.0
O1	C7	C6	C5	180.1	180.0
C6	C5	C4	H4	185.1	180.0
C4	C5	C6	H5	180.0	179.9
C5	C6	C7	C13	0.5	360.0
C7	C6	C5	H6	180.0	180.0
C1	C13	C7	C6	180.3	180.0
C6	C7	O1	C8	331.0	354.6
O1	C7	C6	C13	179.6	180.0
C3	C13	C7	C6	359.9	0.0
C7	C6	C5	H5	176.8	180.1
C5	C6	C7	H6	180.0	180.0
C1	C13	C7	C3	180.3	180.0
C13	C7	O1	C8	150.6	174.6
O1	C7	C13	C6	180.4	180.0
C13	C7	C6	H6	180.5	180.0
N	C10	C9	C8	301.4	59.2
O1	C8	C9	C12	237.2	240.1
O1	C8	C9	H8	118.1	120.1
C9	C8	C12	C11	305.2	57.7
C12	C8	C9	H8	240.9	240.0
C9	C8	C12	H12	65.3	177.6
C9	C8	C12	H12A	185.1	297.8
C10	C9	C8	H9	240.3	240.0
C10	C9	C8	H9A	119.8	120.0
C8	C9	C10	H10	181.6	299.2
C8	C9	C10	H10A	61.3	179.2
H9	C9	C8	H9A	239.5	240.0
N	C11	C12	C8	55.7	300.8
O1	C8	C12	C9	121.2	119.9
O1	C8	C12	H8	240.5	239.8
C12	C8	C9	C10	55.4	302.3
C9	C8	C12	H8	119.3	120.0
C12	C8	C9	H9	175.1	62.3
C12	C8	C9	H9A	295.6	182.3
C8	C12	C11	H11	296.1	180.8
C8	C12	C11	H11A	175.4	60.8
C11	C12	C8	H12	239.9	240.1
C11	C12	C8	H12A	120.1	119.9
H12	C12	C8	H12A	240.2	239.8
C9	C10	N	C11	65.8	298.3
C9	C10	N	HN	186.3	62.4
N	C10	C9	H10	119.8	120.0
N	C10	C9	H10A	240.2	240.0
C10	C9	C8	C12	55.4	302.3
C10	C9	C8	H8	174.5	62.3
C8	C9	C10	H9	119.8	120.0
C8	C9	C10	H9A	240.2	240.0
H9	C9	C10	H9A	120.5	120.1
H10	C10	C9	H10A	120.4	120.0
C12	C11	N	HN	176.3	297.7
N	C11	C12	H11	119.7	120.0
N	C11	C12	H11A	240.3	240.0
C11	C12	C8	H8	185.9	297.7
C8	C12	C11	H12	120.1	120.0
C8	C12	C11	H12A	239.9	240.0
H11	C11	C12	H11A	120.7	120.0
H12	C12	C11	H12A	119.7	120.1
C2	C14	OAR	O2	185.5	180.0
C20	C19	OAR	C14	93.8	180.0
C14	OAR	C19	H19	333.9	60.0
C14	OAR	C19	H19A	213.6	300.0
C23	C24	OAQ	C15	162.3	0.0
C25	C24	OAQ	C15	340.6	180.2
H15	C15	OAQ	H15A	239.9	240.0
H15	C15	OAQ	H15B	120.0	120.0
H15A	C15	OAQ	H15B	240.1	240.0
C14	OAR	C19	C20	93.8	180.0
OAR	C19	C20	H19	240.1	240.0
OAR	C19	C20	H19A	119.9	120.1
C21	C20	C19	C25	175.9	180.3
C19	C20	C21	C22	180.5	180.0
C19	C20	C21	H21	0.5	359.9
C19	C20	C25	C24	179.7	179.7
C19	C20	C25	H25	359.7	0.0
H19	C19	C20	H19A	239.8	240.0
OAR	C19	C20	C21	82.5	90.0
OAR	C19	C20	C25	266.6	269.7
C20	C19	OAR	H19	119.9	120.0
C20	C19	OAR	H19A	240.1	239.9
H19	C19	OAR	H19A	120.2	120.0
C21	C20	C19	OAR	82.5	90.0
C19	C20	C21	C25	184.1	179.7
C21	C20	C19	H19	202.4	210.0
C21	C20	C19	H19A	322.6	330.0
C21	C20	C25	C24	3.5	359.4
C21	C20	C25	H25	183.5	179.7
C20	C21	C22	C23	3.9	360.0
C22	C21	C20	H21	180.0	180.1
C20	C21	C22	H22	183.9	180.0
C25	C20	C19	OAR	266.6	269.7
C19	C20	C25	C21	176.2	180.3
C25	C20	C19	H19	26.5	29.7
C25	C20	C19	H19A	146.7	149.7
C25	C20	C21	C22	356.4	0.3
C25	C20	C21	H21	176.4	180.3
C23	C24	C25	C20	356.2	0.5
C20	C25	C24	OAQ	178.1	180.4
C24	C25	C20	H25	180.0	179.7
C22	C21	C20	C25	356.4	0.3
C20	C21	C22	H21	180.0	179.9
C21	C22	C23	C24	356.1	359.9
C23	C22	C21	H22	180.0	180.0
C21	C22	C23	H23	176.1	180.0
C23	C22	C21	H21	183.9	180.1
C21	C22	C23	H22	180.0	180.0
C22	C23	C24	C25	3.8	359.8
C22	C23	C24	OAQ	182.0	180.0
C24	C23	C22	H23	180.0	180.0
C15	OAQ	C24	C23	162.3	0.0
C20	C25	C24	C23	356.2	0.5
C24	C23	C22	H22	176.1	180.0
C22	C23	C24	H23	180.0	180.0
C25	C24	C23	OAQ	181.8	179.8
C23	C24	C25	H25	176.2	180.2
C15	OAQ	C24	C25	340.6	180.2
C20	C25	C24	H25	180.0	180.3
C23	C24	C25	OAQ	178.2	180.2
C25	C24	C23	H23	183.8	179.8
C24	OAQ	C15	H15	180.0	300.0
C24	OAQ	C15	H15A	300.0	60.0
C24	OAQ	C15	H15B	60.0	180.0
C23	C24	OAQ	C25	181.8	179.8
OAQ	C24	C23	H23	2.0	360.0
OAQ	C24	C25	H25	358.0	0.0
H	C	C1	C2	93.1	90.0
H	C	C1	C13	268.3	270.1
C1	C	H	HA	120.0	120.0
C1	C	H	HB	240.0	240.0
HA	C	H	HB	120.0	120.0
HA	C	C1	C2	213.1	210.1
HA	C	C1	C13	28.3	30.1
C1	C	HA	H	240.0	240.0
C1	C	HA	HB	120.0	119.9
H	C	HA	HB	240.0	240.0
HB	C	C1	C2	333.1	330.0
HB	C	C1	C13	148.3	150.0
C1	C	HB	H	120.0	120.0
C1	C	HB	HA	240.0	240.0
H	C	HB	HA	120.0	120.0
C10	N	HN	C11	237.0	235.8
HN	N	C10	C9	186.3	62.4
HN	N	C10	H10	306.1	182.4
HN	N	C10	H10A	66.4	302.3
HN	N	C11	C12	176.3	297.7
HN	N	C11	H11	296.0	57.7
HN	N	C11	H11A	56.7	177.6
H4	C4	C3	C13	175.2	180.0
C3	C4	H4	C5	180.0	180.0
H4	C4	C5	C6	185.1	180.0
H4	C4	C5	H5	5.1	360.0
C4	C5	H5	C6	180.0	180.1
H5	C5	C4	H4	5.1	360.0
H5	C5	C6	C7	176.8	180.1
H5	C5	C6	H6	356.8	0.1
C5	C6	H6	C7	180.0	180.0
H6	C6	C5	H5	356.8	0.1
H6	C6	C7	C13	180.5	180.0
O1	C8	H8	C9	242.5	239.9
O1	C8	H8	C12	120.6	120.1
C9	C8	H8	C12	238.1	240.3
H8	C8	C9	C10	174.5	62.3
H8	C8	C9	H9	294.2	182.3
H8	C8	C9	H9A	54.7	302.3
H8	C8	C12	C11	185.9	297.7
H8	C8	C12	H12	306.0	57.6
H8	C8	C12	H12A	65.8	177.8
H9	C9	C8	C12	175.1	62.3
C8	C9	H9	C10	241.4	240.2
H9	C9	C8	H8	294.2	182.3
C8	C9	H9	H9A	120.7	120.0
C10	C9	H9	H9A	239.3	239.9
H9	C9	C10	H10	61.9	179.2
H9	C9	C10	H10A	301.5	59.2
H9A	C9	C8	C12	295.6	182.3
C8	C9	H9A	C10	118.6	119.9
H9A	C9	C8	H8	54.7	302.3
C8	C9	H9A	H9	239.3	239.9
C10	C9	H9A	H9	120.7	120.1
H9A	C9	C10	H10	301.4	59.1
H9A	C9	C10	H10A	181.0	299.2
H10	C10	N	C11	185.6	58.3
N	C10	H10	C9	241.0	239.9
H10	C10	N	HN	306.1	182.4
N	C10	H10	H10A	120.5	119.9
H10	C10	C9	H9	61.9	179.2
H10	C10	C9	H9A	301.4	59.1
C9	C10	H10	H10A	239.5	240.0
H10A	C10	N	C11	306.0	178.2
N	C10	H10A	C9	119.0	120.1
H10A	C10	N	HN	66.4	302.3
N	C10	H10A	H10	239.5	240.1
H10A	C10	C9	H9	301.5	59.2
H10A	C10	C9	H9A	181.0	299.2
C9	C10	H10A	H10	120.5	120.0
N	C11	H11	C12	242.0	239.9
H11	C11	N	HN	296.0	57.7
N	C11	H11	H11A	121.0	120.0
C12	C11	H11	H11A	239.0	240.0
H11	C11	C12	H12	175.9	60.8
H11	C11	C12	H12A	56.2	300.8
N	C11	H11A	C12	118.0	120.1
H11A	C11	N	HN	56.7	177.6
N	C11	H11A	H11	239.0	240.0
C12	C11	H11A	H11	121.0	120.0
H11A	C11	C12	H12	55.3	300.9
H11A	C11	C12	H12A	295.5	180.8
C8	C12	H12	C11	239.2	240.2
H12	C12	C8	H8	306.0	57.6
C8	C12	H12	H12A	119.6	120.2
H12	C12	C11	H11	175.9	60.8
H12	C12	C11	H11A	55.3	300.9
C11	C12	H12	H12A	240.4	240.0
C8	C12	H12A	C11	120.8	119.8
H12A	C12	C8	H8	65.8	177.8
C8	C12	H12A	H12	240.3	239.8
H12A	C12	C11	H11	56.2	300.8
H12A	C12	C11	H11A	295.5	180.8
C11	C12	H12A	H12	119.6	120.0
H15	C15	OAQ	C24	180.0	300.0
OAQ	C15	H15	H15A	120.0	119.9
OAQ	C15	H15	H15B	240.0	240.1
H15A	C15	H15	H15B	120.0	120.1
H15A	C15	OAQ	C24	300.0	60.0
OAQ	C15	H15A	H15	240.0	240.0
OAQ	C15	H15A	H15B	119.9	119.9
H15	C15	H15A	H15B	240.0	239.9
H15B	C15	OAQ	C24	60.0	180.0
OAQ	C15	H15B	H15	120.0	120.0
OAQ	C15	H15B	H15A	240.1	240.1
H15	C15	H15B	H15A	120.0	120.1
C20	C19	H19	OAR	240.6	240.0
H19	C19	C20	C21	202.4	210.0
H19	C19	C20	C25	26.5	29.7
C20	C19	H19	H19A	120.3	120.0
OAR	C19	H19	H19A	239.7	240.0
C20	C19	H19A	OAR	119.3	120.0
H19A	C19	C20	C21	322.6	330.0
H19A	C19	C20	C25	146.7	149.7
C20	C19	H19A	H19	239.7	240.0
OAR	C19	H19A	H19	120.3	120.0
H21	C21	C20	C25	176.4	180.3
C20	C21	H21	C22	180.0	180.1
H21	C21	C22	C23	183.9	180.1
H21	C21	C22	H22	3.9	0.0
C21	C22	H22	C23	180.0	180.0
H22	C22	C21	H21	3.9	0.0
H22	C22	C23	C24	176.1	180.0
H22	C22	C23	H23	356.1	360.0
C22	C23	H23	C24	180.0	180.0
H23	C23	C22	H22	356.1	360.0
H23	C23	C24	C25	183.8	179.8
H23	C23	C24	OAQ	2.0	360.0
C20	C25	H25	C24	180.0	179.7
H25	C25	C24	OAQ	358.0	0.0