PDB Chemical Component 4UY

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 4UY

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C35 C36 1.397 1.383
C35 C34 1.389 1.382
C36 C37 1.402 1.382
C34 C33 1.401 1.382
C37 C38 1.392 1.382
C42 N41 1.474 1.469
C33 C38 1.386 1.383
C3 C4 1.392 1.381
C3 C2 1.396 1.387
O39 C40 1.418 1.429
O39 C2 1.358 1.359
C38 C32 1.540 1.507
C4 C5 1.401 1.382
O9 S8 1.493 1.421
C2 C7 1.391 1.387
C5 C6 1.397 1.383
C5 S8 1.750 1.762
C7 C6 1.394 1.380
C32 C19 1.536 1.531
N41 C30 1.472 1.469
S8 O10 1.494 1.422
S8 N11 1.654 1.656
C30 C29 1.539 1.544
C30 C31 1.546 1.555
C19 N20 1.455 1.465
C19 C17 1.526 1.530
C29 O28 1.418 1.444
C16 N11 1.453 1.465
C16 C17 1.535 1.530
N11 C12 1.451 1.465
N20 C21 1.333 1.347
O22 C21 1.233 1.215
C21 O23 1.359 1.346
C17 O18 1.438 1.430
C31 C24 1.532 1.543
C31 C27 1.514 1.555
O28 C27 1.444 1.442
O23 C24 1.435 1.452
C12 C13 1.536 1.529
C24 C25 1.547 1.544
C27 O26 1.426 1.442
C14 C13 1.537 1.530
C13 C15 1.539 1.531
O26 C25 1.427 1.444
C3 H1 1.080 1.080
C4 H2 1.080 1.080
C6 H3 1.080 1.080
C7 H4 1.080 1.081
C12 H5 1.100 1.089
C12 H6 1.100 1.091
C13 H7 1.099 1.091
C14 H8 1.101 1.090
C14 H9 1.100 1.090
C14 H10 1.100 1.090
C15 H11 1.101 1.089
C15 H12 1.100 1.089
C15 H13 1.101 1.090
C16 H14 1.100 1.090
C16 H15 1.100 1.091
C17 H16 1.100 1.090
O18 H17 0.950 0.968
C19 H18 1.100 1.089
N20 H19 1.000 0.970
C24 H20 1.100 1.090
C25 H21 1.100 1.091
C25 H22 1.100 1.090
C27 H23 1.100 1.090
C29 H24 1.100 1.090
C29 H25 1.100 1.090
C30 H26 1.100 1.090
C31 H27 1.100 1.090
N41 H28 1.000 1.009
C42 H30 1.100 1.091
C42 H31 1.100 1.089
C42 H32 1.100 1.090
C32 H33 1.100 1.089
C32 H34 1.100 1.090
C33 H35 1.080 1.080
C34 H36 1.080 1.080
C35 H37 1.080 1.080
C36 H38 1.080 1.080
C37 H39 1.080 1.080
C40 H40 1.100 1.090
C40 H41 1.100 1.090
C40 H42 1.100 1.090

Bond Angles for 4UY

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C35 C36 C37 120.5 119.9
C36 C35 H37 120.3 120.0
C35 C36 H38 119.8 120.0
C35 C34 H36 120.2 120.0
C36 C37 C38 120.1 120.0
C37 C36 H38 119.7 120.1
C36 C37 H39 120.0 119.9
C34 C33 C38 121.5 120.0
C34 C33 H35 119.2 120.1
C33 C38 C37 118.9 120.0
C38 C37 H39 119.9 120.0
C42 N41 H28 108.5 111.0
C38 C33 H35 119.3 119.9
C3 C4 C5 120.9 120.1
C4 C3 H1 119.5 120.1
C3 C4 H2 119.6 120.0
C3 C2 C7 118.1 119.9
O39 C40 H40 109.5 109.5
O39 C40 H41 109.5 109.5
O39 C40 H42 109.4 109.5
C38 C32 H33 109.6 109.5
C38 C32 H34 109.7 109.5
C4 C5 C6 117.9 120.1
C4 C5 S8 120.5 120.0
C5 C4 H2 119.6 120.0
O9 S8 O10 113.1 123.2
O9 S8 N11 107.6 106.4
C2 C7 C6 121.1 120.0
C2 C7 H4 119.5 120.0
C6 C5 S8 121.6 119.9
C5 C6 H3 119.5 119.9
C5 S8 O10 110.6 106.4
C5 S8 N11 110.5 107.3
C7 C6 H3 119.5 120.0
C32 C19 H18 108.4 109.4
N41 C30 H26 113.4 110.5
O10 S8 N11 105.5 106.4
S8 N11 C12 115.0 120.0
C30 C29 H24 109.9 110.4
C30 C29 H25 109.9 110.5
C31 C30 H26 112.1 110.9
C30 C31 H27 110.9 112.8
C19 N20 C21 129.6 120.0
N20 C19 H18 109.5 109.5
C19 N20 H19 115.2 120.0
C19 C17 H16 107.5 109.5
C16 C17 O18 110.0 109.4
C17 C16 H14 109.4 109.5
C17 C16 H15 109.4 109.4
C16 C17 H16 107.4 109.5
N11 C12 C13 114.8 109.4
N11 C12 H5 108.1 109.5
N11 C12 H6 108.1 109.4
N20 C21 O23 113.0 120.0
C21 N20 H19 115.2 120.0
O22 C21 O23 125.9 120.0
C21 O23 C24 118.1 117.0
O18 C17 H16 108.6 109.5
C17 O18 H17 109.5 114.0
C31 C24 H20 112.2 110.6
C31 C27 H23 110.8 112.7
O28 C27 H23 111.8 112.5
O23 C24 C25 106.7 110.5
O23 C24 H20 113.8 110.4
C12 C13 C15 110.4 109.5
C13 C12 H5 108.1 109.5
C13 C12 H6 108.1 109.5
C12 C13 H7 108.6 109.4
C25 C24 H20 112.0 110.5
C24 C25 H21 110.9 110.4
C24 C25 H22 111.0 110.4
C14 C13 C15 108.6 109.5
C14 C13 H7 108.6 109.5
C15 C13 H7 108.6 109.4
C13 C15 H11 109.5 109.4
C13 C15 H12 109.5 109.4
C13 C15 H13 109.5 109.5
O26 C25 H21 111.0 110.3
O26 C25 H22 110.9 110.4
H5 C12 H6 109.4 109.5
H8 C14 H9 109.5 109.5
H8 C14 H10 109.5 109.4
H9 C14 H10 109.5 109.4
H11 C15 H12 109.5 109.5
H11 C15 H13 109.5 109.5
H12 C15 H13 109.5 109.5
H14 C16 H15 109.4 109.5
H21 C25 H22 109.5 110.4
H24 C29 H25 109.4 110.3
H30 C42 H31 109.5 109.4
H30 C42 H32 109.4 109.5
H31 C42 H32 109.5 109.5
H33 C32 H34 109.5 109.5
H40 C40 H41 109.5 109.4
H40 C40 H42 109.5 109.4
H41 C40 H42 109.5 109.5

Torsion Angles for 4UY

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C36 C35 C34 H36 182.7 180.0
C35 C36 C37 C38 0.8 0.0
C37 C36 C35 H38 180.0 180.1
C35 C36 C37 H39 180.8 180.0
C35 C34 C33 C38 358.0 0.0
C35 C34 C33 H35 178.0 179.7
C37 C36 C35 H37 177.8 180.0
C35 C36 C37 H38 180.0 179.9
C33 C38 C37 C36 360.0 359.9
C38 C37 C36 H39 180.0 180.1
C34 C33 C38 C37 0.6 0.0
C38 C33 C34 H35 180.0 180.3
C38 C37 C36 H38 180.8 180.1
C36 C37 C38 H39 180.0 179.9
C37 C38 C33 H35 180.6 180.3
C37 C38 C32 H33 53.0 149.7
C37 C38 C32 H34 173.2 29.7
C42 N41 C30 H26 322.7 323.9
C36 C37 C38 C33 360.0 359.9
C34 C33 C38 H35 180.0 179.7
C33 C38 C37 H39 180.0 180.0
C33 C38 C32 H33 231.1 330.0
C33 C38 C32 H34 351.3 210.0
C4 C3 C2 C7 0.1 360.0
C3 C4 C5 C6 360.0 0.0
C3 C4 C5 S8 180.0 180.0
C5 C4 C3 H2 180.0 180.0
C3 C2 C7 C6 359.9 360.0
C3 C2 C7 H4 179.9 180.0
H40 C40 O39 H41 240.0 240.0
H40 C40 O39 H42 120.0 120.0
H41 C40 O39 H42 240.0 240.0
O39 C2 C7 H4 359.9 0.3
C38 C32 C19 H18 58.6 55.0
H33 C32 C38 H34 239.8 120.0
C5 C4 C3 H1 180.0 180.0
C3 C4 C5 H2 180.0 180.0
C6 C5 C4 S8 180.0 180.0
C4 C5 C6 H3 180.0 180.0
C4 C5 S8 O10 154.2 336.4
C4 C5 S8 N11 270.6 90.0
C5 S8 O9 O10 123.8 122.9
C5 S8 O9 N11 239.9 245.8
O10 S8 O9 N11 116.1 122.9
O9 S8 N11 C12 188.8 336.4
C2 C7 C6 H3 180.0 180.0
C4 C5 C6 S8 180.0 180.0
C6 C5 C4 H2 180.0 180.0
C2 C7 C6 C5 0.1 0.0
C6 C5 S8 O10 334.2 156.5
C6 C5 S8 N11 90.6 270.0
C7 C6 C5 H3 180.0 179.9
C4 C5 S8 C6 179.9 180.0
S8 C5 C4 H2 0.0 0.0
O9 S8 C5 O10 234.8 227.1
O9 S8 C5 N11 118.3 113.6
S8 C5 C6 H3 360.0 0.0
O10 S8 C5 N11 243.6 246.5
C5 S8 N11 C12 308.2 90.0
C2 C7 C6 H4 180.0 180.0
C7 C6 C5 S8 180.0 179.9
C5 C6 C7 H3 180.0 180.1
N20 C19 C32 H18 242.1 240.0
C32 C19 N20 H19 305.9 265.0
C32 C19 C17 H16 168.5 175.0
N41 C30 C29 H24 203.6 24.5
N41 C30 C29 H25 324.1 262.2
C31 C30 N41 H26 235.0 237.2
N41 C30 C31 H27 33.7 4.0
O9 S8 O10 N11 242.7 237.0
C5 S8 O10 N11 119.5 114.1
O10 S8 N11 C12 67.8 203.5
O9 S8 N11 O10 121.0 132.9
C5 S8 N11 O10 240.5 246.5
S8 N11 C12 C13 216.6 95.0
S8 N11 C12 H5 337.4 215.1
S8 N11 C12 H6 95.8 335.1
H24 C29 C30 H25 239.6 122.3
N41 C30 C31 H26 125.8 122.6
C31 C30 C29 H24 89.9 266.2
C31 C30 C29 H25 210.3 144.0
C30 C31 C24 H20 264.1 227.6
C30 C31 C27 H23 104.6 100.8
C32 C19 N20 H18 117.2 120.0
N20 C19 C17 H16 48.8 55.0
C19 N20 C21 O23 181.7 180.0
C21 N20 C19 H19 180.0 180.1
C19 C17 C16 H14 170.5 65.0
C19 C17 C16 H15 50.7 305.0
C16 C17 C19 H16 118.2 120.1
O18 C17 C19 H16 241.8 240.0
C19 C17 O18 H17 180.0 300.0
C29 O28 C27 H23 237.0 276.3
C16 N11 C12 H5 201.3 35.0
C16 N11 C12 H6 319.7 155.0
C19 C17 C16 H16 241.7 240.0
O18 C17 C16 H16 118.0 120.0
C16 C17 O18 H17 305.2 60.0
H14 C16 C17 H15 119.9 120.0
N11 C12 C13 C15 182.3 295.0
C13 C12 N11 H5 239.2 240.0
C13 C12 N11 H6 120.8 119.9
N11 C12 C13 H7 301.3 55.0
H5 C12 N11 H6 241.6 240.0
C21 N20 C19 H18 8.7 325.1
C19 N20 C21 H19 180.0 179.9
O22 C21 N20 O23 180.6 180.0
N20 C21 O23 C24 176.4 180.0
N20 C21 O22 O23 179.3 180.0
O22 C21 N20 H19 182.2 180.0
O22 C21 O23 C24 355.7 0.0
O23 C21 N20 H19 1.6 0.1
C21 O23 C24 C25 129.8 91.4
C21 O23 C24 H20 5.8 328.9
C19 C17 O18 H16 117.5 120.0
O18 C17 C16 H14 46.8 305.0
O18 C17 C16 H15 286.9 185.0
C16 C17 O18 H16 242.8 240.0
O23 C24 C31 H20 129.2 122.6
C25 C24 C31 H20 241.4 241.3
C31 C24 C25 H21 79.7 143.2
C31 C24 C25 H22 201.6 265.5
C27 C31 C24 H20 150.4 118.0
O28 C27 C31 H23 237.3 237.0
C31 C27 O28 H23 122.1 123.1
C31 C24 O23 H20 231.7 237.3
C25 C24 O23 H20 124.0 122.5
O23 C24 C25 H21 195.8 261.9
O23 C24 C25 H22 317.8 24.3
N11 C12 C13 H5 120.8 120.0
N11 C12 C13 H6 239.2 240.1
C14 C13 C12 C15 238.9 240.0
C14 C13 C12 H7 119.9 120.0
C15 C13 C12 H7 241.0 240.0
C12 C13 C15 H11 180.0 300.0
C12 C13 C15 H12 300.0 60.0
C12 C13 C15 H13 60.0 180.0
H5 C12 C13 H6 118.4 120.0
C31 C24 C25 H20 118.7 118.8
O23 C24 C25 H20 234.9 237.5
O26 C25 C24 H21 241.0 241.2
O26 C25 C24 H22 119.0 118.9
H21 C25 C24 H22 238.1 237.7
C27 O26 C25 H21 274.5 200.6
C27 O26 C25 H22 152.6 78.2
C12 C13 C14 C15 122.2 120.0
C14 C13 C12 H5 300.4 55.0
C14 C13 C12 H6 182.0 295.0
C12 C13 C14 H7 240.1 240.0
C15 C13 C14 H7 117.9 120.0
C14 C13 C15 H11 303.1 60.0
C14 C13 C15 H12 63.1 180.0
C14 C13 C15 H13 183.1 300.0
C15 C13 C12 H5 61.5 175.0
C15 C13 C12 H6 303.1 55.0
C12 C13 C15 H7 119.0 120.0
C14 C13 C15 H7 242.1 240.0
H11 C15 C13 H12 240.0 240.0
H11 C15 C13 H13 120.0 120.0
H12 C15 C13 H13 240.0 240.0
O26 C25 C24 H20 201.9 265.6
C24 C25 O26 H21 119.0 118.8
C24 C25 O26 H22 240.9 241.1
H21 C25 O26 H22 121.9 122.3
H1 C3 C4 C5 180.0 180.0
H1 C3 C4 H2 360.0 0.0
H1 C3 C2 C7 180.1 180.0
C3 C4 H2 C5 180.0 180.0
H2 C4 C3 H1 360.0 0.0
H2 C4 C5 C6 180.0 180.0
H2 C4 C5 S8 0.0 0.0
H3 C6 C5 S8 360.0 0.0
C2 C7 H4 C6 180.0 180.0
H4 C7 C6 H3 0.0 359.9
N11 C12 H5 C13 235.1 240.0
N11 C12 H5 H6 117.6 120.0
H5 C12 C13 C15 61.5 175.0
C13 C12 H5 H6 242.4 240.0
H5 C12 C13 H7 180.5 295.0
N11 C12 H6 C13 124.8 119.9
N11 C12 H6 H5 242.4 240.0
H6 C12 C13 C15 303.1 55.0
C13 C12 H6 H5 117.6 120.1
H6 C12 C13 H7 62.1 175.0
C12 C13 H7 C15 239.9 240.0
H7 C13 C12 H5 180.5 295.0
H7 C13 C12 H6 62.1 175.0
C14 C13 H7 C15 117.9 120.0
H7 C13 C15 H11 61.0 180.0
H7 C13 C15 H12 181.0 300.0
H7 C13 C15 H13 301.0 60.0
H8 C14 C13 C15 57.8 299.9
H8 C14 C13 H7 299.9 180.0
H9 C14 H8 H10 120.0 120.0
H9 C14 C13 C15 177.8 60.0
H9 C14 C13 H7 59.9 300.0
H8 C14 H9 H10 240.0 240.1
H10 C14 C13 C15 297.8 180.0
H10 C14 C13 H7 179.9 60.0
H8 C14 H10 H9 120.0 120.0
H11 C15 C13 H7 61.0 180.0
C13 C15 H11 H12 120.0 120.0
C13 C15 H11 H13 240.0 240.0
H12 C15 H11 H13 120.0 120.1
H12 C15 C13 H7 181.0 300.0
C13 C15 H12 H11 240.0 240.0
C13 C15 H12 H13 120.0 120.0
H11 C15 H12 H13 240.0 239.9
H13 C15 C13 H7 301.0 60.0
C13 C15 H13 H11 120.0 119.9
C13 C15 H13 H12 240.0 240.0
H11 C15 H13 H12 120.0 120.1
H14 C16 C17 O18 46.8 305.0
C17 C16 H14 H15 240.2 240.0
H14 C16 C17 H16 288.8 185.0
H15 C16 C17 O18 286.9 185.0
C17 C16 H15 H14 119.8 120.0
H15 C16 C17 H16 169.0 65.0
C16 C17 H16 O18 118.9 120.0
H16 C17 C16 H14 288.8 185.0
H16 C17 C16 H15 169.0 65.0
H16 C17 O18 H17 62.4 180.0
H17 O18 C17 H16 62.4 180.0
H18 C19 N20 C21 8.7 325.1
H18 C19 N20 H19 188.7 145.0
H18 C19 C17 H16 288.4 294.9
C19 N20 H19 C21 180.0 180.1
H19 N20 C19 H18 188.7 145.0
H19 N20 C21 O23 1.6 0.1
O23 C24 H20 C25 121.1 122.5
H20 C24 C25 H21 321.0 24.4
H20 C24 C25 H22 82.9 146.7
H21 C25 C24 H20 321.0 24.4
C24 C25 H21 H22 122.8 122.3
O26 C25 H21 H22 237.2 237.7
H22 C25 C24 H20 82.9 146.7
C24 C25 H22 H21 237.2 237.7
O26 C25 H22 H21 122.8 122.3
C30 C29 H24 H25 120.7 237.6
C30 C29 H25 H24 239.3 122.3
H26 C30 C29 H24 330.3 147.1
H26 C30 C29 H25 90.7 24.8
H26 C30 C31 H27 267.9 241.5
H27 C31 C30 H26 267.9 241.5
H27 C31 C24 H20 29.8 353.4
H27 C31 C27 H23 344.8 337.7
H28 N41 C30 H26 202.1 199.9
H30 C42 N41 H28 300.6 184.0
H31 C42 H30 H32 120.0 120.0
H31 C42 N41 H28 60.6 303.9
H30 C42 H31 H32 240.0 240.0
H32 C42 N41 H28 180.6 64.0
H30 C42 H32 H31 120.0 120.0
C38 C32 H33 H34 120.3 240.0
H33 C32 C19 H18 298.7 175.0
C38 C32 H34 H33 239.7 120.0
H34 C32 C19 H18 178.5 295.0
C34 C33 H35 C38 180.0 180.3
H35 C33 C38 C37 180.6 180.3
H36 C34 C33 C38 178.0 180.0
H36 C34 C33 H35 358.0 359.7
H37 C35 C36 C37 177.8 180.0
H37 C35 C36 H38 357.8 360.0
H37 C35 C34 H36 2.8 360.0
C35 C36 H38 C37 180.0 180.1
H38 C36 C35 H37 357.8 360.0
H38 C36 C37 C38 180.8 180.1
H38 C36 C37 H39 0.8 0.0
C36 C37 H39 C38 180.0 180.1
H39 C37 C36 H38 0.8 0.0
O39 C40 H40 H41 120.0 120.0
O39 C40 H40 H42 240.0 240.0
H41 C40 H40 H42 120.0 120.0
O39 C40 H41 H40 240.0 240.0
O39 C40 H41 H42 120.0 120.0
H40 C40 H41 H42 240.0 240.1
O39 C40 H42 H40 120.0 120.0
O39 C40 H42 H41 240.0 240.0
H40 C40 H42 H41 120.0 119.9