PDB Chemical Component 4T1
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 4T1
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C27 |
C28 |
1.384 |
1.382 |
C27 |
C26 |
1.389 |
1.384 |
C28 |
C29 |
1.388 |
1.390 |
C26 |
C25 |
1.388 |
1.382 |
C29 |
C30 |
1.392 |
1.387 |
C29 |
N31 |
1.418 |
1.406 |
C25 |
C30 |
1.392 |
1.383 |
C25 |
C23 |
1.510 |
1.507 |
N31 |
C32 |
1.356 |
1.356 |
C23 |
N24 |
1.458 |
1.484 |
O16 |
C15 |
1.228 |
1.213 |
C32 |
C33 |
1.506 |
1.507 |
C32 |
O34 |
1.227 |
1.213 |
C15 |
N24 |
1.339 |
1.371 |
C15 |
C13 |
1.544 |
1.510 |
C33 |
C35 |
1.518 |
1.529 |
C17 |
C18 |
1.385 |
1.381 |
C17 |
C14 |
1.390 |
1.382 |
C18 |
C19 |
1.390 |
1.383 |
C35 |
C22 |
1.528 |
1.531 |
N11 |
C13 |
1.454 |
1.465 |
N11 |
C9 |
1.388 |
1.394 |
C13 |
C14 |
1.522 |
1.509 |
C14 |
C21 |
1.385 |
1.383 |
C19 |
C22 |
1.509 |
1.506 |
C19 |
C20 |
1.386 |
1.383 |
C8 |
C9 |
1.395 |
1.399 |
C8 |
C7 |
1.365 |
1.362 |
C9 |
C10 |
1.377 |
1.381 |
C21 |
C20 |
1.380 |
1.382 |
C7 |
C4 |
1.420 |
1.400 |
C10 |
C5 |
1.415 |
1.400 |
C4 |
C5 |
1.431 |
1.419 |
C4 |
C3 |
1.449 |
1.413 |
C5 |
C6 |
1.420 |
1.410 |
N12 |
C3 |
1.350 |
1.384 |
C3 |
N2 |
1.386 |
1.319 |
C6 |
C1 |
1.362 |
1.360 |
N2 |
C1 |
1.341 |
1.327 |
C13 |
H44 |
1.100 |
1.091 |
C18 |
H46 |
1.080 |
1.080 |
C17 |
H45 |
1.080 |
1.081 |
C20 |
H47 |
1.080 |
1.080 |
C21 |
H48 |
1.080 |
1.080 |
C22 |
H49 |
1.100 |
1.091 |
C22 |
H50 |
1.100 |
1.089 |
C23 |
H51 |
1.100 |
1.090 |
C23 |
H52 |
1.100 |
1.090 |
C27 |
H55 |
1.080 |
1.079 |
C33 |
H60 |
1.100 |
1.090 |
C33 |
H59 |
1.100 |
1.090 |
C1 |
H36 |
1.080 |
1.080 |
C6 |
H37 |
1.080 |
1.080 |
C7 |
H38 |
1.080 |
1.080 |
C8 |
H39 |
1.080 |
1.080 |
C10 |
H40 |
1.080 |
1.080 |
N11 |
H41 |
1.000 |
0.969 |
N12 |
H43 |
1.000 |
0.970 |
N12 |
H42 |
1.000 |
0.971 |
N24 |
H53 |
1.000 |
0.970 |
C26 |
H54 |
1.080 |
1.079 |
C28 |
H56 |
1.080 |
1.080 |
C30 |
H57 |
1.080 |
1.080 |
N31 |
H58 |
1.000 |
0.970 |
C35 |
H61 |
1.100 |
1.091 |
C35 |
H62 |
1.100 |
1.090 |
Bond Angles for 4T1
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C26 |
C27 |
C28 |
120.3 |
120.0 |
C27 |
C28 |
C29 |
119.8 |
119.9 |
C28 |
C27 |
H55 |
119.8 |
120.0 |
C27 |
C28 |
H56 |
120.1 |
120.0 |
C27 |
C26 |
C25 |
120.7 |
120.2 |
C26 |
C27 |
H55 |
119.8 |
120.0 |
C27 |
C26 |
H54 |
119.7 |
119.8 |
C28 |
C29 |
C30 |
119.5 |
120.0 |
C28 |
C29 |
N31 |
120.2 |
119.4 |
C29 |
C28 |
H56 |
120.1 |
120.1 |
C26 |
C25 |
C30 |
118.5 |
120.1 |
C30 |
C29 |
N31 |
120.2 |
120.6 |
C25 |
C30 |
C29 |
121.2 |
119.9 |
C29 |
C30 |
H57 |
119.4 |
120.1 |
C29 |
N31 |
C32 |
127.1 |
118.3 |
C29 |
N31 |
H58 |
116.5 |
120.9 |
C25 |
C30 |
H57 |
119.4 |
120.0 |
C25 |
C23 |
H51 |
108.7 |
109.7 |
C25 |
C23 |
H52 |
108.7 |
109.8 |
N31 |
C32 |
O34 |
123.8 |
120.5 |
C32 |
N31 |
H58 |
116.4 |
120.8 |
C15 |
N24 |
C23 |
122.6 |
114.4 |
N24 |
C23 |
H51 |
108.7 |
109.7 |
N24 |
C23 |
H52 |
108.7 |
109.7 |
C23 |
N24 |
H53 |
118.7 |
122.8 |
O16 |
C15 |
N24 |
123.4 |
121.0 |
C32 |
C33 |
C35 |
115.9 |
109.9 |
C32 |
C33 |
H60 |
107.8 |
109.4 |
C32 |
C33 |
H59 |
107.8 |
109.3 |
C15 |
N24 |
H53 |
118.7 |
122.8 |
C15 |
C13 |
C14 |
106.0 |
108.3 |
C15 |
C13 |
H44 |
109.1 |
109.7 |
C35 |
C33 |
H60 |
107.9 |
109.4 |
C35 |
C33 |
H59 |
107.8 |
109.4 |
C33 |
C35 |
H61 |
107.6 |
109.4 |
C33 |
C35 |
H62 |
107.5 |
109.4 |
C17 |
C18 |
C19 |
120.7 |
120.1 |
C17 |
C18 |
H46 |
119.6 |
120.0 |
C13 |
C14 |
C17 |
121.8 |
120.1 |
C17 |
C14 |
C21 |
118.1 |
120.0 |
C14 |
C17 |
H45 |
119.6 |
119.9 |
C18 |
C19 |
C22 |
121.5 |
120.1 |
C18 |
C19 |
C20 |
118.2 |
119.9 |
C19 |
C18 |
H46 |
119.6 |
119.9 |
C35 |
C22 |
H49 |
107.7 |
109.5 |
C35 |
C22 |
H50 |
107.7 |
109.5 |
N11 |
C13 |
C14 |
111.6 |
109.7 |
N11 |
C13 |
H44 |
110.4 |
109.7 |
C13 |
C14 |
C21 |
120.0 |
119.9 |
C14 |
C13 |
H44 |
109.4 |
109.7 |
C14 |
C21 |
H48 |
119.5 |
120.1 |
C20 |
C19 |
C22 |
120.3 |
120.0 |
C19 |
C22 |
H49 |
107.8 |
109.5 |
C19 |
C22 |
H50 |
107.7 |
109.5 |
C19 |
C20 |
H47 |
119.5 |
120.0 |
C8 |
C9 |
C10 |
119.9 |
120.7 |
C9 |
C8 |
H39 |
119.6 |
119.5 |
C8 |
C7 |
H38 |
119.2 |
120.1 |
C9 |
C10 |
H40 |
119.5 |
120.3 |
C21 |
C20 |
H47 |
119.5 |
120.0 |
C4 |
C5 |
C6 |
119.1 |
118.3 |
C5 |
C6 |
H37 |
120.1 |
120.5 |
C6 |
C1 |
H36 |
118.0 |
119.0 |
N2 |
C1 |
H36 |
118.0 |
119.0 |
H49 |
C22 |
H50 |
109.5 |
109.5 |
H51 |
C23 |
H52 |
109.5 |
109.7 |
H60 |
C33 |
H59 |
109.4 |
109.4 |
H43 |
N12 |
H42 |
109.4 |
120.0 |
H61 |
C35 |
H62 |
109.5 |
109.5 |
Torsion Angles for 4T1
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C28 |
C27 |
C26 |
C25 |
0.7 |
0.2 |
C26 |
C27 |
C28 |
H55 |
180.0 |
180.0 |
C28 |
C27 |
C26 |
H54 |
180.7 |
180.2 |
C27 |
C28 |
C29 |
C30 |
359.8 |
0.2 |
C27 |
C28 |
C29 |
N31 |
177.2 |
180.5 |
C29 |
C28 |
C27 |
H56 |
180.0 |
180.0 |
C26 |
C27 |
C28 |
C29 |
359.4 |
359.8 |
C28 |
C27 |
C26 |
H55 |
180.0 |
180.0 |
C26 |
C27 |
C28 |
H56 |
179.4 |
179.8 |
C27 |
C26 |
C25 |
C30 |
0.2 |
359.9 |
C29 |
C28 |
C27 |
H55 |
179.4 |
179.7 |
C27 |
C28 |
C29 |
H56 |
180.0 |
180.0 |
C30 |
C29 |
C28 |
N31 |
182.6 |
179.7 |
C25 |
C30 |
C29 |
C28 |
1.0 |
359.9 |
C28 |
C29 |
C30 |
H57 |
181.0 |
180.0 |
C28 |
C29 |
N31 |
C32 |
224.3 |
181.2 |
C28 |
C29 |
N31 |
H58 |
44.3 |
1.3 |
C25 |
C26 |
C27 |
C28 |
0.7 |
0.2 |
C25 |
C26 |
C27 |
H55 |
180.6 |
180.2 |
C27 |
C26 |
C25 |
H54 |
180.0 |
180.0 |
C26 |
C25 |
C30 |
C29 |
359.0 |
0.0 |
C26 |
C25 |
C30 |
H57 |
179.0 |
180.0 |
C26 |
C25 |
C23 |
H51 |
328.7 |
31.5 |
C26 |
C25 |
C23 |
H52 |
87.8 |
270.9 |
C28 |
C29 |
C30 |
N31 |
177.4 |
180.3 |
C30 |
C29 |
C28 |
H56 |
179.8 |
180.2 |
C30 |
C29 |
N31 |
C32 |
41.7 |
1.5 |
C30 |
C29 |
N31 |
H58 |
221.7 |
181.5 |
C25 |
C30 |
C29 |
H57 |
180.0 |
179.9 |
C28 |
C29 |
N31 |
C30 |
182.6 |
179.7 |
N31 |
C29 |
C28 |
H56 |
357.2 |
0.4 |
C25 |
C30 |
C29 |
N31 |
183.6 |
179.6 |
N31 |
C29 |
C30 |
H57 |
3.6 |
359.7 |
C29 |
N31 |
C32 |
O34 |
1.5 |
3.8 |
C32 |
N31 |
C29 |
H58 |
180.0 |
180.0 |
C28 |
C29 |
C30 |
C25 |
1.0 |
359.9 |
C29 |
C30 |
C25 |
H57 |
180.0 |
180.1 |
C30 |
C25 |
C23 |
H51 |
148.1 |
211.5 |
C30 |
C25 |
C23 |
H52 |
267.2 |
90.8 |
N24 |
C23 |
C25 |
H51 |
239.6 |
119.7 |
N24 |
C23 |
C25 |
H52 |
120.5 |
240.3 |
C25 |
C23 |
N24 |
H53 |
249.5 |
311.6 |
H51 |
C23 |
C25 |
H52 |
240.9 |
120.6 |
C29 |
N31 |
C32 |
H58 |
180.0 |
180.0 |
N31 |
C32 |
C33 |
C35 |
62.6 |
237.3 |
N31 |
C32 |
C33 |
H60 |
183.5 |
357.4 |
N31 |
C32 |
C33 |
H59 |
301.6 |
117.2 |
C25 |
C23 |
N24 |
H51 |
120.5 |
240.3 |
C25 |
C23 |
N24 |
H52 |
239.6 |
119.8 |
O16 |
C15 |
N24 |
C23 |
15.4 |
5.4 |
C15 |
N24 |
C23 |
H53 |
180.0 |
180.0 |
H51 |
C23 |
N24 |
H52 |
119.1 |
239.5 |
O16 |
C15 |
N24 |
H53 |
195.4 |
185.4 |
O16 |
C15 |
C13 |
H44 |
138.0 |
119.5 |
C35 |
C33 |
C32 |
H60 |
239.0 |
239.8 |
C35 |
C33 |
C32 |
H59 |
120.9 |
120.1 |
C32 |
C33 |
C35 |
H61 |
189.8 |
149.5 |
C32 |
C33 |
C35 |
H62 |
307.6 |
29.5 |
H60 |
C33 |
C32 |
H59 |
241.9 |
240.2 |
O34 |
C32 |
N31 |
H58 |
181.5 |
183.8 |
O34 |
C32 |
C33 |
C35 |
239.5 |
57.2 |
O34 |
C32 |
C33 |
H60 |
0.5 |
177.4 |
O34 |
C32 |
C33 |
H59 |
118.6 |
297.2 |
C15 |
N24 |
C23 |
H51 |
309.1 |
251.3 |
C15 |
N24 |
C23 |
H52 |
190.0 |
11.8 |
C23 |
N24 |
C15 |
H53 |
180.0 |
180.0 |
N24 |
C15 |
C13 |
C14 |
77.7 |
59.1 |
N24 |
C15 |
C13 |
H44 |
319.9 |
299.4 |
C15 |
C13 |
C14 |
C17 |
61.0 |
256.0 |
N11 |
C13 |
C15 |
C14 |
120.9 |
119.8 |
N11 |
C13 |
C15 |
H44 |
238.7 |
239.4 |
C15 |
C13 |
C14 |
C21 |
240.3 |
76.0 |
C14 |
C13 |
C15 |
H44 |
117.8 |
119.7 |
C32 |
C33 |
C35 |
H60 |
121.0 |
120.2 |
C32 |
C33 |
C35 |
H59 |
239.1 |
240.0 |
C33 |
C35 |
C22 |
H49 |
49.0 |
310.5 |
C33 |
C35 |
C22 |
H50 |
167.0 |
190.4 |
H60 |
C33 |
C35 |
H59 |
118.1 |
119.8 |
H61 |
C35 |
C33 |
H62 |
242.2 |
120.0 |
C13 |
C14 |
C17 |
C18 |
181.9 |
178.4 |
C17 |
C18 |
C19 |
C22 |
177.8 |
181.1 |
C17 |
C18 |
C19 |
C20 |
358.5 |
0.9 |
C19 |
C18 |
C17 |
H46 |
180.0 |
180.1 |
C14 |
C17 |
C18 |
C19 |
359.1 |
0.4 |
C14 |
C17 |
C18 |
H46 |
179.0 |
180.3 |
N11 |
C13 |
C14 |
C17 |
301.0 |
136.2 |
C13 |
C14 |
C17 |
C21 |
179.4 |
179.9 |
C17 |
C14 |
C13 |
H44 |
178.5 |
15.7 |
C17 |
C14 |
C21 |
H48 |
178.4 |
181.2 |
C17 |
C18 |
C19 |
H46 |
180.0 |
179.9 |
C20 |
C19 |
C18 |
C22 |
180.7 |
179.8 |
C18 |
C19 |
C22 |
H49 |
190.3 |
190.5 |
C18 |
C19 |
C22 |
H50 |
72.3 |
310.5 |
C18 |
C19 |
C20 |
H47 |
182.4 |
178.9 |
C19 |
C22 |
C35 |
H49 |
239.0 |
120.0 |
C19 |
C22 |
C35 |
H50 |
121.0 |
240.0 |
H49 |
C22 |
C35 |
H50 |
242.0 |
120.0 |
C15 |
C13 |
N11 |
C14 |
242.5 |
241.1 |
C15 |
C13 |
N11 |
H44 |
120.6 |
120.6 |
N11 |
C13 |
C14 |
C21 |
120.3 |
316.1 |
C14 |
C13 |
N11 |
H44 |
238.1 |
239.5 |
C9 |
N11 |
C13 |
C14 |
276.9 |
205.0 |
C9 |
N11 |
C13 |
H44 |
38.8 |
325.5 |
N11 |
C9 |
C8 |
H39 |
0.3 |
0.3 |
N11 |
C9 |
C10 |
H40 |
1.0 |
359.7 |
C15 |
C13 |
C14 |
H44 |
242.4 |
240.3 |
C17 |
C14 |
C13 |
C21 |
180.6 |
180.1 |
C13 |
C14 |
C17 |
H45 |
1.9 |
358.5 |
N11 |
C13 |
C14 |
H44 |
122.5 |
120.5 |
C13 |
C14 |
C21 |
H48 |
359.0 |
1.3 |
C13 |
C14 |
C21 |
C17 |
180.6 |
180.1 |
C21 |
C14 |
C17 |
H45 |
182.5 |
178.5 |
C21 |
C14 |
C13 |
H44 |
357.9 |
195.6 |
C14 |
C21 |
C20 |
H47 |
179.1 |
180.0 |
C18 |
C19 |
C22 |
C20 |
180.7 |
179.8 |
C22 |
C19 |
C18 |
H46 |
357.8 |
1.2 |
C35 |
C22 |
C19 |
H49 |
121.0 |
240.0 |
C35 |
C22 |
C19 |
H50 |
239.0 |
120.0 |
C22 |
C19 |
C20 |
H47 |
3.1 |
358.7 |
H49 |
C22 |
C19 |
H50 |
118.0 |
240.0 |
C18 |
C19 |
C20 |
C22 |
179.3 |
180.2 |
C20 |
C19 |
C18 |
H46 |
178.5 |
181.0 |
C20 |
C19 |
C22 |
H49 |
9.6 |
10.7 |
C20 |
C19 |
C22 |
H50 |
251.6 |
130.7 |
C21 |
C20 |
C19 |
H47 |
180.0 |
180.0 |
C9 |
C8 |
C7 |
H38 |
179.2 |
180.0 |
C8 |
C9 |
C10 |
H40 |
180.1 |
180.0 |
C10 |
C9 |
C8 |
H39 |
181.1 |
180.0 |
C17 |
C14 |
C21 |
C20 |
358.4 |
1.3 |
C13 |
C14 |
C21 |
C20 |
179.0 |
181.3 |
C21 |
C20 |
C19 |
C22 |
183.1 |
178.7 |
C19 |
C20 |
C21 |
H47 |
180.0 |
180.0 |
C10 |
C5 |
C6 |
H37 |
1.1 |
359.8 |
C4 |
C5 |
C6 |
H37 |
179.0 |
180.0 |
C5 |
C6 |
C1 |
H36 |
179.6 |
179.7 |
C3 |
N2 |
C1 |
H36 |
181.0 |
180.0 |
N2 |
C1 |
C6 |
H36 |
180.0 |
179.8 |
C6 |
C1 |
N2 |
H36 |
180.0 |
180.2 |
C15 |
C13 |
H44 |
C14 |
115.6 |
118.8 |
H44 |
C13 |
C14 |
C17 |
178.5 |
15.7 |
N11 |
C13 |
H44 |
C14 |
236.8 |
239.5 |
H44 |
C13 |
C14 |
C21 |
357.9 |
195.6 |
C17 |
C18 |
H46 |
C19 |
180.0 |
180.1 |
H46 |
C18 |
C19 |
C22 |
357.8 |
1.2 |
H46 |
C18 |
C19 |
C20 |
178.5 |
181.0 |
H45 |
C17 |
C18 |
C19 |
179.0 |
180.4 |
H45 |
C17 |
C18 |
H46 |
359.0 |
0.3 |
H45 |
C17 |
C14 |
C21 |
182.5 |
178.5 |
H47 |
C20 |
C19 |
C22 |
3.1 |
358.7 |
H48 |
C21 |
C20 |
H47 |
359.1 |
0.1 |
C35 |
C22 |
H49 |
H50 |
116.9 |
239.9 |
C19 |
C22 |
H49 |
H50 |
243.1 |
120.0 |
C35 |
C22 |
H50 |
H49 |
243.1 |
120.1 |
C19 |
C22 |
H50 |
H49 |
116.9 |
240.0 |
C25 |
C23 |
H51 |
H52 |
118.6 |
239.3 |
N24 |
C23 |
H51 |
H52 |
241.4 |
120.5 |
H51 |
C23 |
N24 |
H53 |
129.1 |
71.3 |
C25 |
C23 |
H52 |
H51 |
241.4 |
120.6 |
N24 |
C23 |
H52 |
H51 |
118.6 |
239.5 |
H52 |
C23 |
N24 |
H53 |
10.0 |
191.8 |
C26 |
C27 |
H55 |
C28 |
180.0 |
180.0 |
H55 |
C27 |
C28 |
C29 |
179.4 |
179.7 |
H55 |
C27 |
C28 |
H56 |
359.4 |
359.8 |
H55 |
C27 |
C26 |
C25 |
180.6 |
180.2 |
H55 |
C27 |
C26 |
H54 |
0.6 |
0.2 |
C32 |
C33 |
H60 |
C35 |
234.1 |
239.5 |
C32 |
C33 |
H60 |
H59 |
117.0 |
119.8 |
C35 |
C33 |
H60 |
H59 |
242.9 |
240.2 |
H60 |
C33 |
C35 |
H61 |
68.8 |
29.3 |
H60 |
C33 |
C35 |
H62 |
186.6 |
269.3 |
C32 |
C33 |
H59 |
C35 |
125.9 |
120.4 |
C32 |
C33 |
H59 |
H60 |
243.0 |
240.2 |
C35 |
C33 |
H59 |
H60 |
117.1 |
119.8 |
H59 |
C33 |
C35 |
H61 |
310.7 |
269.5 |
H59 |
C33 |
C35 |
H62 |
68.5 |
149.5 |
H37 |
C6 |
C1 |
H36 |
359.6 |
0.2 |
H39 |
C8 |
C9 |
C10 |
181.1 |
180.0 |
H39 |
C8 |
C7 |
H38 |
359.2 |
359.7 |
H41 |
N11 |
C13 |
C14 |
39.4 |
25.1 |
H41 |
N11 |
C13 |
H44 |
161.3 |
145.6 |
C15 |
N24 |
H53 |
C23 |
180.0 |
180.0 |
H53 |
N24 |
C23 |
H51 |
129.1 |
71.3 |
H53 |
N24 |
C23 |
H52 |
10.0 |
191.8 |
H54 |
C26 |
C27 |
C28 |
180.7 |
180.2 |
C27 |
C26 |
H54 |
C25 |
180.0 |
180.0 |
H54 |
C26 |
C27 |
H55 |
0.6 |
0.2 |
H54 |
C26 |
C25 |
C30 |
180.2 |
179.9 |
C27 |
C28 |
H56 |
C29 |
180.0 |
180.0 |
H56 |
C28 |
C27 |
H55 |
359.4 |
359.8 |
H56 |
C28 |
C29 |
C30 |
179.8 |
180.2 |
H56 |
C28 |
C29 |
N31 |
357.2 |
0.4 |
H57 |
C30 |
C29 |
N31 |
3.6 |
359.7 |
C25 |
C30 |
H57 |
C29 |
180.0 |
180.1 |
C29 |
N31 |
H58 |
C32 |
180.0 |
180.0 |
H58 |
N31 |
C32 |
O34 |
181.5 |
183.8 |
H61 |
C35 |
C33 |
H60 |
68.8 |
29.3 |
H61 |
C35 |
C33 |
H59 |
310.7 |
269.5 |
C33 |
C35 |
H61 |
H62 |
116.5 |
240.1 |
H61 |
C35 |
C22 |
H49 |
287.9 |
70.4 |
H61 |
C35 |
C22 |
H50 |
45.9 |
310.4 |
H62 |
C35 |
C33 |
H60 |
186.6 |
269.3 |
H62 |
C35 |
C33 |
H59 |
68.5 |
149.5 |
C33 |
C35 |
H62 |
H61 |
243.4 |
119.9 |
H62 |
C35 |
C22 |
H49 |
170.0 |
190.4 |
H62 |
C35 |
C22 |
H50 |
288.1 |
70.4 |