PDB Chemical Component 4OP
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 4OP
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
CN2 |
N |
1.435 |
1.469 |
CD |
N |
1.447 |
1.478 |
CD |
CG |
1.493 |
1.549 |
N |
CA |
1.427 |
1.474 |
N |
CN1 |
1.432 |
1.468 |
CA |
CB |
1.488 |
1.543 |
CA |
C |
1.521 |
1.508 |
CG |
CB |
1.461 |
1.551 |
CG |
OG |
1.384 |
1.429 |
O |
C |
1.260 |
1.208 |
C |
OXT |
1.294 |
1.341 |
CN1 |
H1 |
1.100 |
1.091 |
CN1 |
H2 |
1.100 |
1.090 |
CN1 |
H3 |
1.100 |
1.090 |
CD |
H4 |
1.100 |
1.090 |
CD |
H5 |
1.100 |
1.090 |
CG |
H6 |
1.100 |
1.090 |
CB |
H7 |
1.100 |
1.090 |
CB |
H8 |
1.100 |
1.091 |
CA |
H9 |
1.100 |
1.089 |
OXT |
HXT |
0.950 |
0.967 |
OG |
H11 |
0.950 |
0.967 |
CN2 |
H12 |
1.100 |
1.091 |
CN2 |
H13 |
1.100 |
1.090 |
CN2 |
H14 |
1.100 |
1.090 |
Bond Angles for 4OP
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
CD |
N |
CA |
104.9 |
108.6 |
CD |
CG |
CB |
106.2 |
101.6 |
CD |
CG |
OG |
109.9 |
111.0 |
CG |
CD |
H4 |
110.3 |
110.4 |
CG |
CD |
H5 |
110.3 |
110.4 |
CD |
CG |
H6 |
109.5 |
111.0 |
N |
CA |
CB |
105.3 |
107.2 |
N |
CA |
C |
117.8 |
109.9 |
N |
CA |
H9 |
108.2 |
109.9 |
N |
CN1 |
H1 |
109.5 |
109.5 |
N |
CN1 |
H2 |
109.5 |
109.5 |
N |
CN1 |
H3 |
109.5 |
109.4 |
CA |
CB |
H7 |
110.6 |
110.7 |
CA |
CB |
H8 |
110.5 |
110.8 |
CA |
C |
OXT |
120.1 |
120.0 |
C |
CA |
H9 |
107.0 |
110.0 |
CB |
CG |
OG |
110.2 |
111.0 |
CB |
CG |
H6 |
109.9 |
111.0 |
CG |
CB |
H7 |
110.5 |
110.7 |
CG |
CB |
H8 |
110.5 |
110.7 |
OG |
CG |
H6 |
111.1 |
110.9 |
CG |
OG |
H11 |
109.5 |
113.9 |
C |
OXT |
HXT |
109.5 |
117.0 |
H1 |
CN1 |
H2 |
109.5 |
109.5 |
H1 |
CN1 |
H3 |
109.5 |
109.4 |
H2 |
CN1 |
H3 |
109.5 |
109.5 |
H4 |
CD |
H5 |
109.5 |
110.4 |
H7 |
CB |
H8 |
109.5 |
110.6 |
H12 |
CN2 |
H13 |
109.5 |
109.5 |
H12 |
CN2 |
H14 |
109.5 |
109.4 |
H13 |
CN2 |
H14 |
109.4 |
109.5 |
Torsion Angles for 4OP
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
CN2 |
N |
CA |
H9 |
321.3 |
0.8 |
CN2 |
N |
CN1 |
H1 |
180.0 |
290.3 |
CN2 |
N |
CN1 |
H2 |
300.0 |
50.4 |
CN2 |
N |
CN1 |
H3 |
60.0 |
170.4 |
CD |
N |
CA |
CB |
323.8 |
0.9 |
CD |
N |
CA |
C |
200.0 |
241.5 |
CD |
N |
CA |
H9 |
78.5 |
120.4 |
CD |
N |
CN1 |
H1 |
60.3 |
170.0 |
CD |
N |
CN1 |
H2 |
180.3 |
290.1 |
CD |
N |
CN1 |
H3 |
300.3 |
50.1 |
CG |
CD |
N |
CA |
29.5 |
335.9 |
CB |
CG |
CD |
OG |
240.8 |
241.9 |
CB |
CG |
CD |
H6 |
118.6 |
118.1 |
CD |
CG |
CB |
H7 |
230.3 |
82.7 |
CD |
CG |
CB |
H8 |
109.0 |
205.8 |
OG |
CG |
CD |
H6 |
237.8 |
236.2 |
CD |
CG |
OG |
H11 |
180.0 |
180.0 |
H4 |
CD |
CG |
H5 |
121.1 |
122.3 |
CA |
N |
CN1 |
H1 |
304.0 |
50.8 |
CA |
N |
CN1 |
H2 |
64.0 |
170.9 |
CA |
N |
CN1 |
H3 |
184.0 |
290.9 |
N |
CA |
CB |
H7 |
148.1 |
263.9 |
N |
CA |
CB |
H8 |
269.5 |
140.8 |
N |
CA |
C |
OXT |
150.9 |
235.3 |
C |
CA |
N |
H9 |
121.5 |
121.2 |
H1 |
CN1 |
N |
H2 |
240.0 |
239.9 |
H1 |
CN1 |
N |
H3 |
120.0 |
119.9 |
H2 |
CN1 |
N |
H3 |
240.0 |
240.0 |
N |
CA |
CB |
C |
231.7 |
240.6 |
N |
CA |
CB |
H9 |
115.2 |
119.5 |
CA |
CB |
CG |
OG |
230.7 |
206.3 |
CA |
CB |
CG |
H6 |
108.0 |
82.4 |
CG |
CB |
CA |
H7 |
240.7 |
118.4 |
CG |
CB |
CA |
H8 |
119.3 |
241.6 |
H7 |
CB |
CA |
H8 |
238.6 |
123.2 |
N |
CA |
C |
CB |
121.1 |
117.8 |
N |
CA |
C |
H9 |
237.9 |
238.9 |
C |
CA |
CB |
H7 |
276.4 |
23.3 |
C |
CA |
CB |
H8 |
37.8 |
260.2 |
CA |
C |
OXT |
HXT |
178.5 |
179.9 |
CD |
CG |
CB |
OG |
118.9 |
118.0 |
CB |
CG |
CD |
H4 |
229.2 |
278.2 |
CB |
CG |
CD |
H5 |
108.1 |
155.9 |
CD |
CG |
CB |
H6 |
241.7 |
241.9 |
N |
CA |
CB |
CG |
28.8 |
22.3 |
CA |
CB |
CG |
H7 |
119.3 |
241.6 |
CA |
CB |
CG |
H8 |
240.7 |
118.5 |
OG |
CG |
CB |
H6 |
122.8 |
123.9 |
CB |
CG |
OG |
H11 |
296.6 |
292.2 |
H7 |
CB |
CG |
H8 |
121.4 |
236.9 |
CD |
CG |
OG |
CB |
243.4 |
247.8 |
OG |
CG |
CD |
H4 |
348.4 |
36.3 |
OG |
CG |
CD |
H5 |
227.3 |
274.0 |
CD |
CG |
OG |
H6 |
121.3 |
123.8 |
CB |
CG |
OG |
H6 |
237.9 |
236.1 |
OG |
CG |
CB |
H7 |
111.4 |
324.7 |
OG |
CG |
CB |
H8 |
350.0 |
87.8 |
O |
C |
CA |
H9 |
91.4 |
176.4 |
O |
C |
OXT |
HXT |
360.0 |
360.0 |
OXT |
C |
CA |
H9 |
272.9 |
356.5 |
N |
CN1 |
H1 |
H2 |
120.0 |
120.1 |
N |
CN1 |
H1 |
H3 |
240.0 |
240.1 |
H2 |
CN1 |
H1 |
H3 |
120.0 |
120.0 |
N |
CN1 |
H2 |
H1 |
240.0 |
239.9 |
N |
CN1 |
H2 |
H3 |
120.0 |
120.0 |
H1 |
CN1 |
H2 |
H3 |
240.0 |
240.0 |
N |
CN1 |
H3 |
H1 |
120.0 |
119.9 |
N |
CN1 |
H3 |
H2 |
240.0 |
240.0 |
H1 |
CN1 |
H3 |
H2 |
120.0 |
120.1 |
H4 |
CD |
N |
CA |
149.0 |
94.8 |
H4 |
CD |
CG |
CB |
229.2 |
278.2 |
H4 |
CD |
CG |
OG |
348.4 |
36.3 |
CG |
CD |
H4 |
H5 |
238.4 |
237.7 |
H4 |
CD |
CG |
H6 |
110.6 |
160.1 |
H5 |
CD |
N |
CA |
270.0 |
217.1 |
H5 |
CD |
CG |
CB |
108.1 |
155.9 |
H5 |
CD |
CG |
OG |
227.3 |
274.0 |
CG |
CD |
H5 |
H4 |
121.6 |
122.3 |
H5 |
CD |
CG |
H6 |
349.5 |
37.8 |
CD |
CG |
H6 |
CB |
116.2 |
112.2 |
CD |
CG |
H6 |
OG |
238.5 |
236.2 |
H6 |
CG |
CD |
H4 |
110.6 |
160.1 |
H6 |
CG |
CD |
H5 |
349.5 |
37.8 |
CB |
CG |
H6 |
OG |
122.3 |
123.9 |
H6 |
CG |
CB |
H7 |
348.7 |
200.8 |
H6 |
CG |
CB |
H8 |
227.3 |
323.9 |
H6 |
CG |
OG |
H11 |
58.7 |
56.1 |
CA |
CB |
H7 |
H8 |
122.0 |
236.7 |
H7 |
CB |
CG |
OG |
111.4 |
324.7 |
H7 |
CB |
CG |
H6 |
348.7 |
200.8 |
CG |
CB |
H7 |
H8 |
238.0 |
123.1 |
CA |
CB |
H8 |
H7 |
238.0 |
123.2 |
H8 |
CB |
CG |
OG |
350.0 |
87.8 |
H8 |
CB |
CG |
H6 |
227.3 |
323.9 |
CG |
CB |
H8 |
H7 |
122.0 |
236.9 |
N |
CA |
H9 |
CB |
246.8 |
242.2 |
N |
CA |
H9 |
C |
127.9 |
121.1 |
H9 |
CA |
CB |
H7 |
32.9 |
144.5 |
H9 |
CA |
CB |
H8 |
154.3 |
21.3 |
H9 |
CA |
C |
OXT |
272.9 |
356.5 |
H11 |
OG |
CG |
H6 |
58.7 |
56.1 |
H13 |
CN2 |
H12 |
H14 |
120.0 |
120.0 |
H12 |
CN2 |
H13 |
H14 |
240.0 |
240.1 |
H12 |
CN2 |
H14 |
H13 |
120.0 |
120.0 |