PDB Chemical Component 4OJ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 4OJ
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.395 |
1.383 |
C1 |
C6 |
1.390 |
1.382 |
C2 |
C3 |
1.395 |
1.382 |
C3 |
C4 |
1.388 |
1.382 |
C4 |
C5 |
1.394 |
1.387 |
C5 |
C6 |
1.389 |
1.387 |
C5 |
O12 |
1.379 |
1.359 |
C6 |
C7 |
1.520 |
1.507 |
O12 |
P13 |
1.580 |
1.610 |
P13 |
O1P |
1.468 |
1.481 |
P13 |
O2P |
1.486 |
1.610 |
P13 |
O3P |
|
1.611 |
C1 |
H1 |
1.080 |
1.080 |
C2 |
H2 |
1.080 |
1.081 |
C3 |
H3 |
1.080 |
1.080 |
C4 |
H4 |
1.080 |
1.080 |
C7 |
H71C |
1.099 |
1.090 |
C7 |
H72C |
1.100 |
1.090 |
C7 |
H73C |
1.100 |
1.090 |
O2P |
HO2P |
0.950 |
0.967 |
O3P |
HO3P |
|
0.967 |
Bond Angles for 4OJ
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C6 |
119.3 |
120.0 |
C1 |
C2 |
C3 |
121.0 |
120.1 |
C2 |
C1 |
H1 |
120.4 |
120.0 |
C1 |
C2 |
H2 |
119.5 |
119.9 |
C1 |
C6 |
C5 |
119.9 |
119.9 |
C1 |
C6 |
C7 |
121.5 |
120.0 |
C6 |
C1 |
H1 |
120.4 |
120.0 |
C2 |
C3 |
C4 |
119.3 |
120.1 |
C3 |
C2 |
H2 |
119.5 |
119.9 |
C2 |
C3 |
H3 |
120.3 |
120.0 |
C3 |
C4 |
C5 |
119.8 |
119.9 |
C4 |
C3 |
H3 |
120.3 |
120.0 |
C3 |
C4 |
H4 |
120.1 |
120.0 |
C4 |
C5 |
C6 |
120.8 |
119.9 |
C4 |
C5 |
O12 |
122.2 |
120.0 |
C5 |
C4 |
H4 |
120.1 |
120.1 |
C6 |
C5 |
O12 |
117.0 |
120.1 |
C5 |
C6 |
C7 |
118.7 |
120.1 |
C5 |
O12 |
P13 |
128.6 |
114.1 |
C6 |
C7 |
H71C |
109.5 |
109.5 |
C6 |
C7 |
H72C |
109.5 |
109.4 |
C6 |
C7 |
H73C |
109.4 |
109.5 |
O12 |
P13 |
O1P |
112.2 |
109.5 |
O12 |
P13 |
O2P |
107.1 |
109.5 |
O12 |
P13 |
O3P |
|
109.5 |
O1P |
P13 |
O2P |
111.7 |
109.5 |
O1P |
P13 |
O3P |
|
109.4 |
O2P |
P13 |
O3P |
|
109.5 |
P13 |
O2P |
HO2P |
109.5 |
114.0 |
P13 |
O3P |
HO3P |
|
114.0 |
H71C |
C7 |
H72C |
109.4 |
109.4 |
H71C |
C7 |
H73C |
109.5 |
109.5 |
H72C |
C7 |
H73C |
109.5 |
109.5 |
Torsion Angles for 4OJ
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C6 |
C5 |
0.2 |
359.9 |
C2 |
C1 |
C6 |
C7 |
179.9 |
180.0 |
C6 |
C1 |
C2 |
H1 |
180.0 |
180.3 |
C1 |
C2 |
C3 |
C4 |
359.8 |
0.0 |
C3 |
C2 |
C1 |
H2 |
180.0 |
180.0 |
C1 |
C2 |
C3 |
H3 |
179.8 |
180.0 |
C6 |
C1 |
C2 |
C3 |
0.0 |
0.0 |
C2 |
C1 |
C6 |
H1 |
180.0 |
179.7 |
C6 |
C1 |
C2 |
H2 |
180.0 |
180.0 |
C4 |
C5 |
C6 |
C1 |
359.8 |
0.1 |
C1 |
C6 |
C5 |
O12 |
179.3 |
180.1 |
C5 |
C6 |
C1 |
C7 |
180.3 |
179.9 |
C1 |
C6 |
C7 |
H71C |
90.2 |
90.0 |
C1 |
C6 |
C7 |
H72C |
210.2 |
210.0 |
C1 |
C6 |
C7 |
H73C |
330.2 |
329.9 |
C3 |
C2 |
C1 |
C6 |
0.0 |
0.0 |
C3 |
C2 |
C1 |
H1 |
180.0 |
179.7 |
C1 |
C2 |
C3 |
H2 |
180.0 |
180.0 |
C2 |
C3 |
C4 |
C5 |
0.2 |
360.0 |
C4 |
C3 |
C2 |
H3 |
180.0 |
180.1 |
C2 |
C3 |
C4 |
H4 |
180.2 |
179.9 |
C4 |
C3 |
C2 |
H2 |
179.8 |
180.0 |
C2 |
C3 |
C4 |
H3 |
180.0 |
179.9 |
C3 |
C4 |
C5 |
C6 |
359.9 |
360.0 |
C3 |
C4 |
C5 |
O12 |
180.6 |
180.0 |
C5 |
C4 |
C3 |
H4 |
180.0 |
180.0 |
C1 |
C6 |
C5 |
C4 |
359.8 |
0.1 |
C5 |
C4 |
C3 |
H3 |
180.3 |
180.0 |
C3 |
C4 |
C5 |
H4 |
180.0 |
180.0 |
C6 |
C5 |
C4 |
O12 |
179.4 |
180.0 |
C4 |
C5 |
C6 |
C7 |
180.2 |
180.0 |
C4 |
C5 |
O12 |
P13 |
272.7 |
75.0 |
C1 |
C6 |
C5 |
C7 |
179.7 |
180.1 |
C5 |
C6 |
C1 |
H1 |
180.1 |
180.2 |
C4 |
C5 |
C6 |
O12 |
180.6 |
180.0 |
C6 |
C5 |
C4 |
H4 |
179.9 |
180.0 |
C6 |
C5 |
O12 |
P13 |
93.3 |
255.0 |
C5 |
C6 |
C7 |
H71C |
269.9 |
270.1 |
C5 |
C6 |
C7 |
H72C |
29.8 |
30.0 |
C5 |
C6 |
C7 |
H73C |
149.8 |
150.0 |
C4 |
C5 |
O12 |
C6 |
179.4 |
180.0 |
O12 |
C5 |
C4 |
H4 |
0.6 |
0.0 |
O12 |
C5 |
C6 |
C7 |
359.6 |
360.0 |
C5 |
O12 |
P13 |
O1P |
8.8 |
54.9 |
C5 |
O12 |
P13 |
O2P |
131.7 |
175.0 |
C5 |
O12 |
P13 |
O3P |
|
295.0 |
C1 |
C6 |
C7 |
C5 |
180.3 |
179.9 |
C7 |
C6 |
C1 |
H1 |
359.8 |
0.3 |
C7 |
C6 |
C5 |
O12 |
359.6 |
360.0 |
H71C |
C7 |
C6 |
H72C |
240.0 |
240.1 |
H71C |
C7 |
C6 |
H73C |
120.0 |
120.1 |
H72C |
C7 |
C6 |
H73C |
240.0 |
240.0 |
O1P |
P13 |
O12 |
O2P |
237.1 |
240.0 |
O1P |
P13 |
O12 |
O3P |
|
119.9 |
O2P |
P13 |
O12 |
O3P |
|
240.0 |
O12 |
P13 |
O2P |
HO2P |
236.7 |
180.0 |
O12 |
P13 |
O3P |
HO3P |
|
300.0 |
O12 |
P13 |
O1P |
O2P |
120.3 |
120.0 |
O12 |
P13 |
O1P |
O3P |
|
240.0 |
O2P |
P13 |
O1P |
O3P |
|
120.0 |
O1P |
P13 |
O2P |
HO2P |
360.0 |
300.0 |
O1P |
P13 |
O3P |
HO3P |
|
180.0 |
O12 |
P13 |
O2P |
O1P |
236.7 |
240.0 |
O12 |
P13 |
O2P |
O3P |
|
120.0 |
O1P |
P13 |
O2P |
O3P |
|
240.0 |
O2P |
P13 |
O3P |
HO3P |
|
60.0 |
O12 |
P13 |
O3P |
O1P |
|
120.0 |
O12 |
P13 |
O3P |
O2P |
|
239.9 |
O1P |
P13 |
O3P |
O2P |
|
120.0 |
O3P |
P13 |
O2P |
HO2P |
|
59.9 |
C2 |
C1 |
H1 |
C6 |
180.0 |
180.3 |
H1 |
C1 |
C2 |
C3 |
180.0 |
179.7 |
H1 |
C1 |
C2 |
H2 |
0.1 |
359.7 |
H1 |
C1 |
C6 |
C5 |
180.1 |
180.2 |
H1 |
C1 |
C6 |
C7 |
359.8 |
0.3 |
H2 |
C2 |
C1 |
C6 |
180.0 |
180.0 |
C1 |
C2 |
H2 |
C3 |
180.0 |
180.0 |
H2 |
C2 |
C1 |
H1 |
0.1 |
359.7 |
H2 |
C2 |
C3 |
C4 |
179.8 |
180.0 |
H2 |
C2 |
C3 |
H3 |
359.7 |
359.9 |
C2 |
C3 |
H3 |
C4 |
180.0 |
180.1 |
H3 |
C3 |
C2 |
H2 |
359.7 |
359.9 |
H3 |
C3 |
C4 |
C5 |
180.3 |
180.0 |
H3 |
C3 |
C4 |
H4 |
0.3 |
360.0 |
C3 |
C4 |
H4 |
C5 |
180.0 |
180.0 |
H4 |
C4 |
C3 |
H3 |
0.3 |
360.0 |
H4 |
C4 |
C5 |
C6 |
179.9 |
180.0 |
H4 |
C4 |
C5 |
O12 |
0.6 |
0.0 |
C6 |
C7 |
H71C |
H72C |
120.0 |
120.0 |
C6 |
C7 |
H71C |
H73C |
240.0 |
240.0 |
H72C |
C7 |
H71C |
H73C |
120.0 |
120.0 |
C6 |
C7 |
H72C |
H71C |
240.0 |
240.0 |
C6 |
C7 |
H72C |
H73C |
120.0 |
120.0 |
H71C |
C7 |
H72C |
H73C |
240.0 |
239.9 |
C6 |
C7 |
H73C |
H71C |
120.0 |
120.0 |
C6 |
C7 |
H73C |
H72C |
240.0 |
240.0 |
H71C |
C7 |
H73C |
H72C |
120.0 |
120.0 |
HO2P |
O2P |
P13 |
O3P |
|
59.9 |