PDB Chemical Component 4MU
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 4MU
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C5 |
C6 |
1.377 |
1.365 |
| C5 |
C4A |
1.398 |
1.399 |
| C6 |
C7 |
1.403 |
1.394 |
| C7 |
C8 |
1.370 |
1.385 |
| C7 |
O1' |
1.315 |
1.357 |
| C2 |
C3 |
1.420 |
1.410 |
| C2 |
O2 |
1.252 |
1.218 |
| C2 |
O1 |
1.360 |
1.342 |
| C3 |
C4 |
1.407 |
1.359 |
| C4 |
CM4 |
1.519 |
1.507 |
| C4 |
C4A |
1.480 |
1.464 |
| O1 |
C8A |
1.374 |
1.350 |
| C4A |
C8A |
1.483 |
1.407 |
| C8A |
C8 |
1.382 |
1.387 |
| C5 |
H5 |
1.080 |
1.080 |
| C6 |
H6 |
1.079 |
1.080 |
| C3 |
H3 |
1.080 |
1.080 |
| CM4 |
HM4 |
1.100 |
1.090 |
| CM4 |
HM4A |
1.101 |
1.090 |
| CM4 |
HM4B |
1.100 |
1.090 |
| C8 |
H8 |
1.080 |
1.080 |
| O1' |
HO1' |
0.950 |
0.968 |
Bond Angles for 4MU
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C6 |
C5 |
C4A |
116.8 |
119.8 |
| C5 |
C6 |
C7 |
121.3 |
120.4 |
| C6 |
C5 |
H5 |
121.6 |
120.1 |
| C5 |
C6 |
H6 |
119.3 |
119.8 |
| C5 |
C4A |
C4 |
121.4 |
121.0 |
| C5 |
C4A |
C8A |
121.4 |
120.0 |
| C4A |
C5 |
H5 |
121.6 |
120.1 |
| C6 |
C7 |
C8 |
123.7 |
120.5 |
| C6 |
C7 |
O1' |
120.9 |
119.7 |
| C7 |
C6 |
H6 |
119.3 |
119.8 |
| C8 |
C7 |
O1' |
115.4 |
119.7 |
| C7 |
C8 |
C8A |
117.7 |
119.8 |
| C7 |
C8 |
H8 |
121.1 |
120.1 |
| C7 |
O1' |
HO1' |
109.5 |
114.0 |
| C3 |
C2 |
O2 |
123.5 |
119.2 |
| C3 |
C2 |
O1 |
121.9 |
121.7 |
| C2 |
C3 |
C4 |
121.1 |
119.8 |
| C2 |
C3 |
H3 |
119.4 |
120.1 |
| O2 |
C2 |
O1 |
114.6 |
119.2 |
| C2 |
O1 |
C8A |
121.0 |
121.5 |
| C3 |
C4 |
CM4 |
125.8 |
120.9 |
| C3 |
C4 |
C4A |
118.0 |
118.2 |
| C4 |
C3 |
H3 |
119.5 |
120.1 |
| CM4 |
C4 |
C4A |
116.1 |
120.9 |
| C4 |
CM4 |
HM4 |
109.5 |
109.5 |
| C4 |
CM4 |
HM4A |
109.5 |
109.5 |
| C4 |
CM4 |
HM4B |
109.4 |
109.5 |
| C4 |
C4A |
C8A |
117.1 |
119.0 |
| O1 |
C8A |
C4A |
120.9 |
119.8 |
| O1 |
C8A |
C8 |
120.2 |
120.7 |
| C4A |
C8A |
C8 |
118.9 |
119.4 |
| C8A |
C8 |
H8 |
121.2 |
120.1 |
| HM4 |
CM4 |
HM4A |
109.4 |
109.5 |
| HM4 |
CM4 |
HM4B |
109.4 |
109.4 |
| HM4A |
CM4 |
HM4B |
109.5 |
109.4 |
Torsion Angles for 4MU
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C6 |
C5 |
C4A |
C4 |
180.1 |
180.0 |
| C6 |
C5 |
C4A |
C8A |
357.5 |
0.0 |
| C4A |
C5 |
C6 |
H5 |
180.0 |
180.3 |
| C5 |
C6 |
C7 |
C8 |
1.5 |
360.0 |
| C5 |
C6 |
C7 |
O1' |
180.3 |
180.0 |
| C7 |
C6 |
C5 |
H6 |
180.0 |
180.1 |
| C4A |
C5 |
C6 |
C7 |
1.6 |
0.0 |
| C6 |
C5 |
C4A |
H5 |
180.0 |
179.7 |
| C4A |
C5 |
C6 |
H6 |
181.6 |
180.0 |
| C3 |
C4 |
C4A |
C5 |
177.9 |
180.0 |
| CM4 |
C4 |
C4A |
C5 |
358.9 |
359.9 |
| C4 |
C4A |
C5 |
C8A |
182.5 |
180.0 |
| O1 |
C8A |
C4A |
C5 |
182.5 |
180.0 |
| C5 |
C4A |
C8A |
C8 |
0.4 |
359.9 |
| C7 |
C6 |
C5 |
C4A |
1.6 |
0.0 |
| C7 |
C6 |
C5 |
H5 |
181.6 |
179.7 |
| C5 |
C6 |
C7 |
H6 |
180.0 |
179.9 |
| C8 |
C7 |
C6 |
O1' |
181.2 |
180.0 |
| C6 |
C7 |
C8 |
C8A |
356.3 |
0.0 |
| C6 |
C7 |
C8 |
H8 |
176.3 |
180.0 |
| C6 |
C7 |
O1' |
HO1' |
267.3 |
90.0 |
| C6 |
C7 |
C8 |
O1' |
178.9 |
180.0 |
| C8 |
C7 |
C6 |
H6 |
181.5 |
180.0 |
| C8 |
C7 |
O1' |
HO1' |
86.2 |
270.0 |
| O1 |
C8A |
C8 |
C7 |
180.5 |
180.0 |
| C4A |
C8A |
C8 |
C7 |
2.6 |
0.0 |
| C8A |
C8 |
C7 |
H8 |
180.0 |
180.0 |
| C6 |
C7 |
O1' |
C8 |
181.1 |
180.0 |
| O1' |
C7 |
C6 |
H6 |
0.3 |
0.1 |
| O1' |
C7 |
C8 |
C8A |
177.5 |
180.0 |
| O1' |
C7 |
C8 |
H8 |
357.5 |
360.0 |
| O2 |
C2 |
C3 |
O1 |
180.9 |
180.2 |
| C3 |
C2 |
O1 |
C8A |
2.3 |
0.1 |
| C2 |
C3 |
C4 |
CM4 |
179.4 |
180.1 |
| C2 |
C3 |
C4 |
C4A |
0.4 |
0.1 |
| C4 |
C3 |
C2 |
H3 |
180.0 |
179.9 |
| C3 |
C2 |
O2 |
O1 |
179.1 |
179.8 |
| O2 |
C2 |
C3 |
C4 |
179.1 |
180.0 |
| O2 |
C2 |
C3 |
H3 |
359.1 |
0.1 |
| O2 |
C2 |
O1 |
C8A |
181.4 |
179.9 |
| C3 |
C2 |
O1 |
O2 |
180.8 |
180.2 |
| O1 |
C2 |
C3 |
C4 |
358.2 |
359.9 |
| O1 |
C2 |
C3 |
H3 |
178.2 |
180.0 |
| C2 |
O1 |
C8A |
C4A |
358.6 |
360.0 |
| C2 |
O1 |
C8A |
C8 |
180.8 |
180.0 |
| C5 |
C4A |
C4 |
C3 |
177.9 |
180.0 |
| C4 |
C3 |
C2 |
O2 |
179.1 |
180.0 |
| C4 |
C3 |
C2 |
O1 |
358.2 |
359.9 |
| C2 |
C3 |
C4 |
H3 |
180.0 |
180.1 |
| CM4 |
C4 |
C3 |
C4A |
178.9 |
180.1 |
| C3 |
C4 |
CM4 |
HM4 |
207.9 |
360.0 |
| C3 |
C4 |
CM4 |
HM4A |
327.9 |
120.0 |
| C3 |
C4 |
CM4 |
HM4B |
88.0 |
240.0 |
| C3 |
C4 |
C4A |
C8A |
0.4 |
360.0 |
| C5 |
C4A |
C4 |
CM4 |
358.9 |
359.9 |
| C3 |
C4 |
CM4 |
C4A |
181.0 |
179.9 |
| CM4 |
C4 |
C3 |
H3 |
359.4 |
0.1 |
| CM4 |
C4 |
C4A |
C8A |
181.3 |
179.9 |
| HM4 |
CM4 |
C4 |
HM4A |
240.0 |
240.0 |
| HM4 |
CM4 |
C4 |
HM4B |
120.0 |
120.0 |
| HM4A |
CM4 |
C4 |
HM4B |
240.0 |
240.0 |
| C5 |
C4A |
C4 |
C8A |
177.6 |
180.0 |
| C4 |
C4A |
C5 |
H5 |
0.0 |
0.3 |
| C3 |
C4 |
C4A |
CM4 |
179.0 |
180.1 |
| C4A |
C4 |
C3 |
H3 |
180.4 |
180.0 |
| C4A |
C4 |
CM4 |
HM4 |
26.9 |
180.0 |
| C4A |
C4 |
CM4 |
HM4A |
146.9 |
300.1 |
| C4A |
C4 |
CM4 |
HM4B |
266.9 |
60.1 |
| O1 |
C8A |
C4A |
C4 |
0.1 |
360.0 |
| C4 |
C4A |
C8A |
C8 |
177.9 |
179.9 |
| C5 |
C4A |
C8A |
O1 |
182.5 |
180.0 |
| C7 |
C8 |
C8A |
O1 |
180.5 |
180.0 |
| C4 |
C4A |
C8A |
O1 |
0.1 |
360.0 |
| C4A |
C8A |
O1 |
C8 |
177.8 |
180.0 |
| O1 |
C8A |
C8 |
H8 |
0.5 |
0.0 |
| C5 |
C4A |
C8A |
C4 |
182.4 |
180.0 |
| C8A |
C4A |
C5 |
H5 |
177.5 |
180.3 |
| C7 |
C8 |
C8A |
C4A |
2.6 |
0.0 |
| O1 |
C8A |
C4A |
C8 |
182.2 |
180.0 |
| C4A |
C8A |
C8 |
H8 |
182.7 |
180.1 |
| C8A |
C8 |
C7 |
O1' |
177.5 |
180.0 |
| C7 |
C8 |
C8A |
H8 |
180.0 |
180.0 |
| O1 |
C8A |
C8 |
C4A |
177.9 |
180.0 |
| C6 |
C5 |
H5 |
C4A |
180.0 |
180.3 |
| H5 |
C5 |
C6 |
C7 |
181.6 |
179.7 |
| H5 |
C5 |
C6 |
H6 |
1.6 |
359.7 |
| H5 |
C5 |
C4A |
C4 |
0.0 |
0.3 |
| H5 |
C5 |
C4A |
C8A |
177.5 |
180.3 |
| H6 |
C6 |
C5 |
C4A |
181.6 |
180.0 |
| C5 |
C6 |
H6 |
C7 |
180.0 |
180.1 |
| H6 |
C6 |
C5 |
H5 |
1.6 |
359.7 |
| H6 |
C6 |
C7 |
C8 |
181.5 |
180.0 |
| H6 |
C6 |
C7 |
O1' |
0.3 |
0.1 |
| H3 |
C3 |
C2 |
O2 |
359.1 |
0.1 |
| H3 |
C3 |
C2 |
O1 |
178.2 |
180.0 |
| C2 |
C3 |
H3 |
C4 |
180.0 |
179.9 |
| H3 |
C3 |
C4 |
CM4 |
359.4 |
0.1 |
| H3 |
C3 |
C4 |
C4A |
180.4 |
180.0 |
| HM4 |
CM4 |
C4 |
C4A |
26.9 |
180.0 |
| C4 |
CM4 |
HM4 |
HM4A |
120.0 |
120.1 |
| C4 |
CM4 |
HM4 |
HM4B |
240.0 |
240.0 |
| HM4A |
CM4 |
HM4 |
HM4B |
120.0 |
119.9 |
| HM4A |
CM4 |
C4 |
C4A |
146.9 |
300.1 |
| C4 |
CM4 |
HM4A |
HM4 |
240.0 |
239.9 |
| C4 |
CM4 |
HM4A |
HM4B |
120.0 |
120.0 |
| HM4 |
CM4 |
HM4A |
HM4B |
240.0 |
240.1 |
| HM4B |
CM4 |
C4 |
C4A |
266.9 |
60.1 |
| C4 |
CM4 |
HM4B |
HM4 |
120.0 |
120.0 |
| C4 |
CM4 |
HM4B |
HM4A |
240.0 |
240.0 |
| HM4 |
CM4 |
HM4B |
HM4A |
120.0 |
119.9 |
| H8 |
C8 |
C7 |
O1' |
357.5 |
360.0 |
| C7 |
C8 |
H8 |
C8A |
180.0 |
180.0 |