PDB Chemical Component 4HT
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 4HT
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N |
CA |
1.436 |
1.441 |
N |
H |
1.020 |
1.006 |
N |
H2 |
1.019 |
1.006 |
CA |
C |
1.496 |
1.521 |
CA |
CB |
1.575 |
1.548 |
CA |
HA |
1.116 |
1.096 |
C |
O |
1.216 |
1.227 |
C |
OXT |
|
1.355 |
CB |
CG |
1.547 |
1.477 |
CB |
HB2 |
1.115 |
1.108 |
CB |
HB3 |
1.116 |
1.111 |
CG |
CD1 |
1.418 |
1.376 |
CG |
CD2 |
1.386 |
1.424 |
CD1 |
NE1 |
1.425 |
1.369 |
CD1 |
HD1 |
1.103 |
1.081 |
NE1 |
CE2 |
1.385 |
1.377 |
NE1 |
HE1 |
1.020 |
1.010 |
CE2 |
CD2 |
1.443 |
1.396 |
CE2 |
CZ2 |
1.450 |
1.400 |
CD2 |
CE3 |
1.446 |
1.409 |
CE3 |
OE3 |
1.422 |
1.370 |
CE3 |
CZ3 |
1.421 |
1.400 |
OE3 |
HE3 |
0.950 |
0.967 |
CZ3 |
CH2 |
1.424 |
1.394 |
CZ3 |
HZ3 |
1.102 |
1.087 |
CH2 |
CZ2 |
1.425 |
1.397 |
CH2 |
HH2 |
1.102 |
1.087 |
CZ2 |
HZ2 |
1.103 |
1.085 |
OXT |
HXT |
|
0.981 |
Bond Angles for 4HT
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
CA |
N |
H |
110.4 |
119.1 |
CA |
N |
H2 |
111.8 |
119.0 |
N |
CA |
C |
110.4 |
111.1 |
N |
CA |
CB |
107.5 |
110.7 |
N |
CA |
HA |
111.9 |
106.2 |
H |
N |
H2 |
112.0 |
120.5 |
C |
CA |
CB |
114.1 |
111.1 |
C |
CA |
HA |
105.0 |
106.9 |
CA |
C |
O |
121.3 |
123.0 |
CA |
C |
OXT |
|
114.8 |
CB |
CA |
HA |
108.1 |
110.6 |
CA |
CB |
CG |
116.4 |
114.1 |
CA |
CB |
HB2 |
109.7 |
108.9 |
CA |
CB |
HB3 |
109.7 |
108.6 |
O |
C |
OXT |
|
122.2 |
C |
OXT |
HXT |
|
114.9 |
CG |
CB |
HB2 |
109.8 |
109.7 |
CG |
CB |
HB3 |
109.7 |
111.3 |
CB |
CG |
CD1 |
127.0 |
125.5 |
CB |
CG |
CD2 |
127.5 |
126.7 |
HB2 |
CB |
HB3 |
100.5 |
103.8 |
CD1 |
CG |
CD2 |
105.5 |
107.7 |
CG |
CD1 |
NE1 |
111.9 |
107.9 |
CG |
CD1 |
HD1 |
123.8 |
131.6 |
CG |
CD2 |
CE2 |
108.3 |
107.0 |
CG |
CD2 |
CE3 |
131.6 |
134.2 |
NE1 |
CD1 |
HD1 |
124.3 |
120.5 |
CD1 |
NE1 |
CE2 |
104.1 |
110.1 |
CD1 |
NE1 |
HE1 |
128.9 |
125.0 |
CE2 |
NE1 |
HE1 |
126.9 |
124.9 |
NE1 |
CE2 |
CD2 |
110.2 |
107.2 |
NE1 |
CE2 |
CZ2 |
129.6 |
130.2 |
CD2 |
CE2 |
CZ2 |
120.2 |
122.7 |
CE2 |
CD2 |
CE3 |
120.0 |
118.8 |
CE2 |
CZ2 |
CH2 |
118.6 |
117.5 |
CE2 |
CZ2 |
HZ2 |
121.5 |
121.4 |
CD2 |
CE3 |
OE3 |
121.2 |
121.7 |
CD2 |
CE3 |
CZ3 |
118.8 |
119.2 |
OE3 |
CE3 |
CZ3 |
119.9 |
119.1 |
CE3 |
OE3 |
HE3 |
121.2 |
109.8 |
CE3 |
CZ3 |
CH2 |
121.3 |
120.8 |
CE3 |
CZ3 |
HZ3 |
119.2 |
119.9 |
CH2 |
CZ3 |
HZ3 |
119.5 |
119.3 |
CZ3 |
CH2 |
CZ2 |
121.0 |
121.0 |
CZ3 |
CH2 |
HH2 |
119.5 |
119.6 |
CZ2 |
CH2 |
HH2 |
119.6 |
119.4 |
CH2 |
CZ2 |
HZ2 |
119.9 |
121.0 |
Torsion Angles for 4HT
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
H |
N |
CA |
H2 |
125.4 |
166.5 |
C |
CA |
N |
CB |
125.0 |
123.9 |
C |
CA |
N |
HA |
243.5 |
244.1 |
N |
CA |
C |
O |
356.2 |
325.5 |
N |
CA |
C |
OXT |
|
145.1 |
CB |
CA |
N |
HA |
118.5 |
120.1 |
N |
CA |
CB |
CG |
305.2 |
202.5 |
N |
CA |
CB |
HB2 |
70.5 |
325.4 |
N |
CA |
CB |
HB3 |
180.0 |
77.8 |
CA |
N |
H |
H2 |
234.7 |
193.7 |
H |
N |
CA |
C |
180.1 |
12.6 |
H |
N |
CA |
CB |
55.1 |
248.7 |
H |
N |
CA |
HA |
296.6 |
128.6 |
CA |
N |
H2 |
H |
124.5 |
166.3 |
H2 |
N |
CA |
C |
54.7 |
206.1 |
H2 |
N |
CA |
CB |
289.7 |
82.2 |
H2 |
N |
CA |
HA |
171.2 |
322.0 |
C |
CA |
N |
H |
180.1 |
12.6 |
C |
CA |
N |
H2 |
54.7 |
206.1 |
N |
CA |
C |
CB |
238.9 |
236.3 |
N |
CA |
C |
HA |
120.7 |
115.5 |
CB |
CA |
C |
HA |
241.9 |
239.2 |
C |
CA |
CB |
CG |
182.4 |
78.5 |
C |
CA |
CB |
HB2 |
307.7 |
201.5 |
C |
CA |
CB |
HB3 |
57.2 |
313.8 |
O |
C |
CA |
OXT |
|
180.4 |
CA |
C |
OXT |
HXT |
|
180.4 |
CB |
CA |
N |
H |
55.1 |
248.7 |
CB |
CA |
N |
H2 |
289.7 |
82.2 |
N |
CA |
CB |
C |
122.8 |
124.0 |
N |
CA |
CB |
HA |
239.1 |
242.5 |
C |
CA |
CB |
HA |
116.3 |
118.6 |
CB |
CA |
C |
O |
117.3 |
89.2 |
CB |
CA |
C |
OXT |
|
268.8 |
CG |
CB |
CA |
HB2 |
234.7 |
237.1 |
CG |
CB |
CA |
HB3 |
125.2 |
124.7 |
CA |
CB |
CG |
CD1 |
254.8 |
270.1 |
CA |
CB |
CG |
CD2 |
75.7 |
90.0 |
HB2 |
CB |
CA |
HB3 |
250.6 |
247.7 |
HA |
CA |
N |
H |
296.6 |
128.6 |
HA |
CA |
N |
H2 |
171.2 |
322.0 |
N |
CA |
HA |
C |
240.2 |
241.2 |
N |
CA |
HA |
CB |
118.1 |
120.2 |
C |
CA |
HA |
CB |
237.9 |
238.9 |
HA |
CA |
C |
O |
235.5 |
210.0 |
HA |
CA |
C |
OXT |
|
29.6 |
HA |
CA |
CB |
CG |
66.1 |
320.0 |
HA |
CA |
CB |
HB2 |
191.4 |
82.9 |
HA |
CA |
CB |
HB3 |
300.9 |
195.2 |
O |
C |
CA |
CB |
117.3 |
89.2 |
O |
C |
CA |
HA |
235.5 |
210.0 |
CA |
C |
O |
OXT |
|
179.6 |
O |
C |
OXT |
HXT |
|
0.0 |
OXT |
C |
CA |
CB |
|
268.8 |
OXT |
C |
CA |
HA |
|
29.6 |
CA |
C |
OXT |
O |
|
180.4 |
CG |
CB |
CA |
HA |
66.1 |
320.0 |
CA |
CB |
CG |
HB2 |
125.3 |
122.5 |
CA |
CB |
CG |
HB3 |
234.8 |
236.7 |
HB2 |
CB |
CG |
HB3 |
109.5 |
114.2 |
CD1 |
CG |
CB |
CD2 |
179.1 |
180.1 |
CB |
CG |
CD1 |
NE1 |
179.7 |
180.0 |
CB |
CG |
CD1 |
HD1 |
359.7 |
359.8 |
CB |
CG |
CD2 |
CE2 |
181.5 |
180.0 |
CB |
CG |
CD2 |
CE3 |
357.7 |
0.0 |
HB2 |
CB |
CA |
HA |
191.4 |
82.9 |
CA |
CB |
HB2 |
CG |
231.0 |
234.5 |
CA |
CB |
HB2 |
HB3 |
115.4 |
115.5 |
CG |
CB |
HB2 |
HB3 |
244.5 |
241.0 |
HB2 |
CB |
CG |
CD1 |
129.5 |
147.6 |
HB2 |
CB |
CG |
CD2 |
310.4 |
327.5 |
HB3 |
CB |
CA |
HA |
300.9 |
195.2 |
CA |
CB |
HB3 |
CG |
129.0 |
126.4 |
CA |
CB |
HB3 |
HB2 |
244.5 |
244.3 |
CG |
CB |
HB3 |
HB2 |
115.6 |
117.9 |
HB3 |
CB |
CG |
CD1 |
20.0 |
33.4 |
HB3 |
CB |
CG |
CD2 |
200.9 |
213.3 |
CD1 |
CG |
CB |
HB2 |
129.5 |
147.6 |
CD1 |
CG |
CB |
HB3 |
20.0 |
33.4 |
CB |
CG |
CD1 |
CD2 |
180.8 |
179.9 |
CD1 |
CG |
CD2 |
CE2 |
2.3 |
359.9 |
CD1 |
CG |
CD2 |
CE3 |
178.5 |
180.0 |
NE1 |
CD1 |
CG |
HD1 |
180.0 |
180.2 |
CG |
CD1 |
NE1 |
CE2 |
359.3 |
359.9 |
CG |
CD1 |
NE1 |
HE1 |
179.4 |
179.9 |
CD2 |
CG |
CB |
HB2 |
310.4 |
327.5 |
CD2 |
CG |
CB |
HB3 |
200.9 |
213.3 |
CB |
CG |
CD2 |
CD1 |
179.2 |
180.1 |
CD2 |
CG |
CD1 |
NE1 |
359.0 |
0.1 |
CD2 |
CG |
CD1 |
HD1 |
179.0 |
179.9 |
NE1 |
CE2 |
CD2 |
CG |
357.2 |
0.0 |
CG |
CD2 |
CE2 |
CZ2 |
180.2 |
180.0 |
CE2 |
CD2 |
CG |
CE3 |
183.8 |
180.0 |
CG |
CD2 |
CE3 |
OE3 |
3.8 |
360.0 |
CG |
CD2 |
CE3 |
CZ3 |
181.2 |
180.0 |
NE1 |
CD1 |
CG |
CD2 |
359.0 |
0.1 |
CG |
CD1 |
NE1 |
HD1 |
180.0 |
179.9 |
CE2 |
NE1 |
CD1 |
HE1 |
180.0 |
180.0 |
CD1 |
NE1 |
CE2 |
CD2 |
2.1 |
0.0 |
CD1 |
NE1 |
CE2 |
CZ2 |
178.7 |
180.0 |
HD1 |
CD1 |
CG |
CD2 |
179.0 |
179.9 |
CG |
CD1 |
HD1 |
NE1 |
180.0 |
180.2 |
HD1 |
CD1 |
NE1 |
CE2 |
179.3 |
180.1 |
HD1 |
CD1 |
NE1 |
HE1 |
359.4 |
0.1 |
CG |
CD2 |
CE2 |
NE1 |
357.2 |
0.0 |
CE2 |
NE1 |
CD1 |
HD1 |
179.3 |
180.1 |
CD1 |
NE1 |
CE2 |
HE1 |
180.0 |
180.0 |
CD2 |
CE2 |
NE1 |
CZ2 |
183.4 |
180.0 |
NE1 |
CE2 |
CD2 |
CE3 |
180.4 |
180.0 |
NE1 |
CE2 |
CZ2 |
CH2 |
180.5 |
180.0 |
NE1 |
CE2 |
CZ2 |
HZ2 |
0.5 |
0.0 |
HE1 |
NE1 |
CD1 |
HD1 |
359.4 |
0.1 |
CD1 |
NE1 |
HE1 |
CE2 |
179.9 |
180.0 |
HE1 |
NE1 |
CE2 |
CD2 |
182.0 |
180.0 |
HE1 |
NE1 |
CE2 |
CZ2 |
358.6 |
0.0 |
CG |
CD2 |
CE2 |
CE3 |
176.7 |
180.0 |
CD2 |
CE2 |
NE1 |
HE1 |
182.0 |
180.0 |
NE1 |
CE2 |
CD2 |
CZ2 |
177.0 |
180.0 |
CD2 |
CE2 |
CZ2 |
CH2 |
356.8 |
0.0 |
CD2 |
CE2 |
CZ2 |
HZ2 |
176.8 |
180.0 |
CE2 |
CD2 |
CE3 |
OE3 |
179.7 |
180.0 |
CE2 |
CD2 |
CE3 |
CZ3 |
357.0 |
0.0 |
CZ2 |
CE2 |
NE1 |
HE1 |
358.6 |
0.0 |
NE1 |
CE2 |
CZ2 |
CD2 |
183.7 |
180.0 |
CZ2 |
CE2 |
CD2 |
CE3 |
3.5 |
360.0 |
CZ3 |
CH2 |
CZ2 |
CE2 |
2.6 |
360.0 |
CE2 |
CZ2 |
CH2 |
HH2 |
182.6 |
180.0 |
CH2 |
CZ2 |
CE2 |
HZ2 |
180.0 |
180.0 |
CG |
CD2 |
CE3 |
CE2 |
184.1 |
180.0 |
CE3 |
CD2 |
CE2 |
CZ2 |
3.5 |
360.0 |
OE3 |
CE3 |
CD2 |
CZ3 |
182.6 |
180.0 |
CD2 |
CE3 |
OE3 |
HE3 |
180.0 |
337.1 |
CD2 |
CE3 |
CZ3 |
CH2 |
2.3 |
360.0 |
CD2 |
CE3 |
CZ3 |
HZ3 |
182.3 |
180.0 |
CD2 |
CE3 |
OE3 |
CZ3 |
177.3 |
180.0 |
OE3 |
CE3 |
CZ3 |
CH2 |
179.7 |
180.0 |
OE3 |
CE3 |
CZ3 |
HZ3 |
359.7 |
0.0 |
CD2 |
CE3 |
CZ3 |
OE3 |
182.6 |
180.0 |
CZ3 |
CE3 |
OE3 |
HE3 |
2.7 |
157.1 |
CH2 |
CZ3 |
CE3 |
HZ3 |
180.0 |
179.9 |
CE3 |
CZ3 |
CH2 |
CZ2 |
357.8 |
0.0 |
CE3 |
CZ3 |
CH2 |
HH2 |
177.8 |
180.0 |
HE3 |
OE3 |
CE3 |
CZ3 |
2.7 |
157.1 |
CE2 |
CZ2 |
CH2 |
CZ3 |
2.6 |
360.0 |
CE3 |
CZ3 |
CH2 |
HZ3 |
180.0 |
180.1 |
CZ2 |
CH2 |
CZ3 |
HH2 |
180.0 |
180.1 |
CZ3 |
CH2 |
CZ2 |
HZ2 |
182.6 |
179.9 |
CE3 |
CZ3 |
HZ3 |
CH2 |
180.0 |
179.9 |
HZ3 |
CZ3 |
CH2 |
CZ2 |
177.9 |
180.0 |
HZ3 |
CZ3 |
CH2 |
HH2 |
357.9 |
359.9 |
CE2 |
CZ2 |
CH2 |
HZ2 |
180.0 |
180.0 |
CZ2 |
CH2 |
CZ3 |
HZ3 |
177.9 |
180.0 |
CZ3 |
CH2 |
CZ2 |
HH2 |
180.0 |
179.9 |
HH2 |
CH2 |
CZ3 |
HZ3 |
357.9 |
359.9 |
CZ3 |
CH2 |
HH2 |
CZ2 |
180.0 |
180.1 |
HH2 |
CH2 |
CZ2 |
HZ2 |
2.6 |
0.0 |
CE2 |
CZ2 |
HZ2 |
CH2 |
180.0 |
180.0 |
HZ2 |
CZ2 |
CH2 |
HH2 |
2.6 |
0.0 |