PDB Chemical Component 4GW

Ideal Model

Chemical Description

Name 5-(5-formylthiophen-2-yl)uridine 5'-(trihydrogen diphosphate)
Formula C14 H16 N2 O13 P2 S
Formal charge 0
Molecular weight 514.295 g/mol
Component type NON-POLYMER

Chemical features

Atom count 48
Chiral atom count 4
Chiral atoms C1' C2' C3' C4'
Bond count 50
Aromatic bond count 5

Chemical Identifiers

Systematic name (ACDLabs) 5-(5-formylthiophen-2-yl)uridine 5'-(trihydrogen diphosphate)
Systematic name (OpenEye OEToolkits) [(2R,3S,4R,5R)-5-[5-(5-methanoylthiophen-2-yl)-2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl phosphono hydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) O[C@H]1[C@@H](O)[C@@H](O[C@@H]1CO[P](O)(=O)O[P](O)(O)=O)N2C=C(C(=O)NC2=O)c3sc(C=O)cc3
SMILES (CACTVS) O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(=O)O[P](O)(O)=O)N2C=C(C(=O)NC2=O)c3sc(C=O)cc3
Stereo SMILES (OpenEye) c1cc(sc1C=O)C2=CN(C(=O)NC2=O)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)OP(=O)(O)O)O)O
InChI descriptor InChI=1S/C14H16N2O13P2S/c17-4-6-1-2-9(32-6)7-3-16(14(21)15-12(7)20)13-11(19)10(18)8(28-13)5-27-31(25,26)29-30(22,23)24/h1-4,8,10-11,13,18-19H,5H2,(H,25,26)(H,15,20,21)(H2,22,23,24)/t8-,10-,11-,13-/m1/s1
InChIKey descriptor JAVHWQPALRUGBE-UORFTKCHSA-N

Status Information

Last modified 2013-01-18
Created 2012-01-13
Release status REL
Model PDB code 3V0N
Processing site RCSB