PDB Chemical Component 4GI
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 4GI
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C14 |
C13 |
1.524 |
1.530 |
C13 |
C12 |
1.524 |
1.530 |
C12 |
O3 |
1.416 |
1.452 |
O3 |
C11 |
1.439 |
1.342 |
O2 |
C11 |
1.218 |
1.208 |
C6 |
C7 |
1.528 |
1.532 |
C6 |
N |
1.458 |
1.469 |
C11 |
C10 |
1.514 |
1.507 |
C2 |
C1 |
1.392 |
1.383 |
C2 |
C3 |
1.389 |
1.383 |
C7 |
C8 |
1.525 |
1.531 |
C1 |
C |
1.389 |
1.383 |
C3 |
C4 |
1.393 |
1.383 |
C8 |
C9 |
1.525 |
1.531 |
N |
C10 |
1.474 |
1.469 |
N |
S |
1.543 |
1.657 |
C10 |
C9 |
1.517 |
1.532 |
C |
C5 |
1.389 |
1.382 |
C4 |
C5 |
1.395 |
1.383 |
C4 |
S |
1.599 |
1.761 |
S |
O |
1.431 |
1.420 |
S |
O1 |
1.412 |
1.421 |
C |
H1 |
1.080 |
1.080 |
C1 |
H2 |
1.080 |
1.080 |
C3 |
H4 |
1.080 |
1.080 |
C5 |
H5 |
1.080 |
1.080 |
C6 |
H6 |
1.100 |
1.090 |
C6 |
H7 |
1.100 |
1.090 |
C7 |
H8 |
1.100 |
1.090 |
C7 |
H9 |
1.100 |
1.089 |
C8 |
H10 |
1.099 |
1.090 |
C8 |
H11 |
1.100 |
1.090 |
C9 |
H12 |
1.100 |
1.089 |
C9 |
H13 |
1.100 |
1.090 |
C10 |
H14 |
1.100 |
1.089 |
C12 |
H15 |
1.100 |
1.090 |
C12 |
H16 |
1.101 |
1.090 |
C13 |
H17 |
1.100 |
1.090 |
C13 |
H18 |
1.099 |
1.090 |
C14 |
H19 |
1.100 |
1.090 |
C14 |
H20 |
1.100 |
1.090 |
C14 |
C15 |
|
1.508 |
C15 |
C16 |
|
1.386 |
C16 |
C17 |
|
1.387 |
C17 |
C18 |
|
1.382 |
C18 |
N19 |
|
1.319 |
N19 |
C20 |
|
1.318 |
C20 |
C15 |
|
1.382 |
C16 |
H21 |
|
1.079 |
C17 |
H22 |
|
1.080 |
C18 |
H23 |
|
1.080 |
C20 |
H25 |
|
1.081 |
C2 |
N1 |
|
1.479 |
N1 |
O4 |
|
1.219 |
N1 |
O5 |
|
1.218 |
Bond Angles for 4GI
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C14 |
C13 |
H17 |
108.9 |
109.4 |
C14 |
C13 |
H18 |
109.0 |
109.5 |
C13 |
C12 |
H15 |
109.6 |
109.5 |
C13 |
C12 |
H16 |
109.6 |
109.5 |
O2 |
C11 |
O3 |
114.7 |
120.0 |
O3 |
C11 |
C10 |
123.7 |
120.0 |
O2 |
C11 |
C10 |
121.6 |
120.0 |
C6 |
C7 |
C8 |
114.9 |
109.3 |
C7 |
C6 |
H6 |
109.4 |
109.6 |
C7 |
C6 |
H7 |
109.5 |
109.6 |
C6 |
C7 |
H8 |
108.1 |
109.5 |
C6 |
C7 |
H9 |
108.1 |
109.5 |
C6 |
N |
C10 |
116.4 |
118.7 |
C11 |
C10 |
H14 |
109.8 |
109.7 |
C2 |
C1 |
H2 |
119.8 |
120.0 |
C2 |
C3 |
C4 |
120.7 |
120.0 |
C2 |
C3 |
H4 |
119.6 |
120.0 |
C3 |
C2 |
N1 |
|
120.0 |
C7 |
C8 |
C9 |
112.2 |
109.5 |
C8 |
C7 |
H8 |
108.1 |
109.5 |
C8 |
C7 |
H9 |
108.1 |
109.5 |
C7 |
C8 |
H10 |
108.8 |
109.5 |
C7 |
C8 |
H11 |
108.8 |
109.4 |
C1 |
C |
C5 |
119.7 |
120.0 |
C1 |
C |
H1 |
120.2 |
120.0 |
C3 |
C4 |
C5 |
119.2 |
120.0 |
C4 |
C3 |
H4 |
119.7 |
120.0 |
C9 |
C8 |
H10 |
108.8 |
109.5 |
C9 |
C8 |
H11 |
108.8 |
109.4 |
C8 |
C9 |
H12 |
109.5 |
109.5 |
C8 |
C9 |
H13 |
109.5 |
109.5 |
S |
N |
C10 |
124.0 |
120.6 |
N |
C10 |
C9 |
106.0 |
108.8 |
N |
C10 |
H14 |
110.4 |
109.6 |
N |
S |
O |
110.5 |
106.4 |
N |
S |
O1 |
111.4 |
106.4 |
C10 |
C9 |
H12 |
109.5 |
109.5 |
C10 |
C9 |
H13 |
109.5 |
109.6 |
C |
C5 |
C4 |
120.4 |
120.0 |
C5 |
C |
H1 |
120.1 |
120.0 |
C |
C5 |
H5 |
119.8 |
120.0 |
C4 |
C5 |
H5 |
119.8 |
120.0 |
H6 |
C6 |
H7 |
109.5 |
109.7 |
H8 |
C7 |
H9 |
109.5 |
109.6 |
H10 |
C8 |
H11 |
109.5 |
109.5 |
H12 |
C9 |
H13 |
109.5 |
109.5 |
H15 |
C12 |
H16 |
109.4 |
109.5 |
H17 |
C13 |
H18 |
109.5 |
109.5 |
H19 |
C14 |
H20 |
109.4 |
109.4 |
H19 |
C14 |
C15 |
|
109.5 |
H20 |
C14 |
C15 |
|
109.5 |
C14 |
C15 |
C16 |
|
120.4 |
C15 |
C16 |
C17 |
|
118.4 |
C15 |
C16 |
H21 |
|
120.8 |
C16 |
C17 |
C18 |
|
119.2 |
C17 |
C16 |
H21 |
|
120.8 |
C16 |
C17 |
H22 |
|
120.4 |
C17 |
C18 |
N19 |
|
120.8 |
C18 |
C17 |
H22 |
|
120.4 |
C17 |
C18 |
H23 |
|
119.6 |
C18 |
N19 |
C20 |
|
121.7 |
N19 |
C18 |
H23 |
|
119.6 |
N19 |
C20 |
H25 |
|
119.6 |
C2 |
N1 |
O4 |
|
120.0 |
C2 |
N1 |
O5 |
|
120.0 |
O4 |
N1 |
O5 |
|
120.0 |
Torsion Angles for 4GI
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C14 |
C13 |
C12 |
H15 |
358.5 |
60.0 |
C14 |
C13 |
C12 |
H16 |
118.6 |
300.0 |
H17 |
C13 |
C14 |
H18 |
240.6 |
120.0 |
H15 |
C12 |
C13 |
H16 |
239.9 |
120.0 |
O2 |
C11 |
O3 |
C10 |
180.3 |
180.0 |
O3 |
C11 |
C10 |
H14 |
307.2 |
357.0 |
O3 |
C11 |
O2 |
C10 |
179.7 |
180.0 |
O2 |
C11 |
C10 |
H14 |
126.9 |
177.0 |
C7 |
C6 |
N |
C10 |
54.7 |
306.3 |
C6 |
C7 |
C8 |
C9 |
45.0 |
298.6 |
C8 |
C7 |
C6 |
H8 |
239.2 |
240.1 |
C8 |
C7 |
C6 |
H9 |
120.8 |
119.9 |
C6 |
C7 |
C8 |
H10 |
165.4 |
58.7 |
C6 |
C7 |
C8 |
H11 |
284.6 |
178.6 |
H6 |
C6 |
C7 |
H7 |
240.0 |
120.4 |
H8 |
C7 |
C6 |
H9 |
241.6 |
239.8 |
S |
N |
C6 |
C10 |
194.3 |
179.8 |
C6 |
N |
C10 |
C9 |
294.9 |
53.7 |
C6 |
N |
C10 |
H14 |
176.1 |
293.6 |
O2 |
C11 |
C10 |
O3 |
179.7 |
180.0 |
N |
C10 |
C11 |
H14 |
126.0 |
120.4 |
C11 |
C10 |
C9 |
H12 |
178.6 |
65.8 |
C11 |
C10 |
C9 |
H13 |
58.5 |
305.6 |
C2 |
C1 |
C |
C5 |
0.5 |
0.0 |
C2 |
C1 |
C |
H1 |
180.5 |
179.8 |
C3 |
C2 |
C1 |
H2 |
179.6 |
180.0 |
C2 |
C3 |
C4 |
C5 |
359.8 |
0.1 |
C4 |
C3 |
C2 |
H4 |
180.0 |
180.0 |
C3 |
C2 |
N1 |
O4 |
|
179.9 |
C3 |
C2 |
N1 |
O5 |
|
359.9 |
C8 |
C7 |
C6 |
H6 |
77.4 |
294.9 |
C8 |
C7 |
C6 |
H7 |
197.4 |
174.5 |
C6 |
C7 |
C8 |
H8 |
120.8 |
119.9 |
C6 |
C7 |
C8 |
H9 |
239.2 |
240.0 |
C9 |
C8 |
C7 |
H10 |
239.6 |
240.0 |
C9 |
C8 |
C7 |
H11 |
120.4 |
120.0 |
C7 |
C8 |
C9 |
H12 |
65.5 |
181.3 |
C7 |
C8 |
C9 |
H13 |
185.5 |
301.4 |
H8 |
C7 |
C8 |
H9 |
118.4 |
120.1 |
H10 |
C8 |
C7 |
H11 |
240.8 |
240.0 |
C1 |
C |
C5 |
C4 |
359.6 |
360.0 |
C5 |
C |
C1 |
H1 |
180.0 |
180.2 |
C1 |
C |
C5 |
H5 |
179.6 |
179.8 |
C2 |
C3 |
C4 |
H4 |
180.0 |
180.0 |
C4 |
C3 |
C2 |
N1 |
|
180.0 |
C |
C5 |
C4 |
C3 |
0.2 |
360.0 |
C3 |
C4 |
C5 |
H5 |
180.3 |
180.2 |
C9 |
C8 |
C7 |
H8 |
284.2 |
178.7 |
C9 |
C8 |
C7 |
H9 |
165.8 |
58.6 |
C7 |
C8 |
C9 |
H10 |
120.4 |
120.0 |
C7 |
C8 |
C9 |
H11 |
239.6 |
240.0 |
N |
C10 |
C9 |
C8 |
61.7 |
305.3 |
C10 |
C9 |
C8 |
H12 |
240.0 |
240.1 |
C10 |
C9 |
C8 |
H13 |
120.0 |
120.0 |
H10 |
C8 |
C9 |
H11 |
119.2 |
120.0 |
H12 |
C9 |
C8 |
H13 |
240.0 |
239.9 |
O3 |
C11 |
C10 |
N |
73.3 |
117.4 |
O2 |
C11 |
C10 |
N |
252.9 |
297.3 |
C11 |
C10 |
N |
H14 |
234.2 |
239.6 |
C10 |
N |
S |
O |
225.6 |
206.4 |
C10 |
N |
S |
O1 |
347.8 |
339.4 |
N |
C10 |
C9 |
H12 |
301.7 |
185.4 |
N |
C10 |
C9 |
H13 |
181.7 |
65.2 |
C6 |
N |
S |
C10 |
164.5 |
180.2 |
S |
N |
C10 |
C9 |
99.7 |
233.9 |
S |
N |
C10 |
H14 |
340.8 |
113.8 |
O3 |
C11 |
C10 |
C9 |
189.6 |
236.5 |
O2 |
C11 |
C10 |
C9 |
9.2 |
56.5 |
C10 |
C9 |
C8 |
H10 |
185.1 |
301.3 |
C10 |
C9 |
C8 |
H11 |
65.9 |
181.4 |
C8 |
C9 |
C10 |
H12 |
120.0 |
119.9 |
C8 |
C9 |
C10 |
H13 |
240.0 |
240.1 |
N |
C10 |
C9 |
H14 |
240.8 |
240.0 |
H12 |
C9 |
C10 |
H13 |
120.0 |
120.2 |
C1 |
C |
C5 |
H1 |
180.0 |
179.8 |
C3 |
C4 |
C5 |
C |
0.2 |
360.0 |
C4 |
C5 |
C |
H5 |
180.0 |
180.2 |
C5 |
C4 |
C3 |
H4 |
179.8 |
180.1 |
C4 |
C5 |
C |
H1 |
179.6 |
180.2 |
C |
C5 |
C4 |
H5 |
180.0 |
179.8 |
C4 |
S |
N |
C10 |
105.2 |
92.9 |
C |
C5 |
C4 |
S |
179.0 |
180.0 |
O |
S |
N |
C10 |
225.6 |
206.4 |
N |
S |
O |
O1 |
123.2 |
122.9 |
O1 |
S |
N |
C10 |
347.8 |
339.4 |
N |
S |
O1 |
O |
237.4 |
237.1 |
C1 |
C |
H1 |
C5 |
180.0 |
180.2 |
H1 |
C |
C5 |
C4 |
179.6 |
180.2 |
H1 |
C |
C5 |
H5 |
359.6 |
360.0 |
H2 |
C1 |
C |
C5 |
180.5 |
180.0 |
H2 |
C1 |
C |
H1 |
0.5 |
359.8 |
C2 |
C3 |
H4 |
C4 |
180.0 |
180.0 |
H4 |
C3 |
C2 |
N1 |
|
0.0 |
H4 |
C3 |
C4 |
C5 |
179.8 |
180.1 |
C |
C5 |
H5 |
C4 |
180.0 |
180.2 |
H5 |
C5 |
C |
H1 |
359.6 |
360.0 |
H6 |
C6 |
C7 |
C8 |
77.4 |
294.9 |
C7 |
C6 |
H6 |
H7 |
120.0 |
239.6 |
H6 |
C6 |
C7 |
H8 |
198.2 |
54.8 |
H6 |
C6 |
C7 |
H9 |
316.6 |
174.9 |
H6 |
C6 |
N |
C10 |
294.7 |
66.1 |
H7 |
C6 |
C7 |
C8 |
197.4 |
174.5 |
C7 |
C6 |
H7 |
H6 |
240.0 |
120.4 |
H7 |
C6 |
C7 |
H8 |
318.2 |
294.3 |
H7 |
C6 |
C7 |
H9 |
76.6 |
54.5 |
H7 |
C6 |
N |
C10 |
174.7 |
186.5 |
C6 |
C7 |
H8 |
C8 |
235.1 |
240.2 |
H8 |
C7 |
C6 |
H6 |
198.2 |
54.8 |
H8 |
C7 |
C6 |
H7 |
318.2 |
294.3 |
C6 |
C7 |
H8 |
H9 |
117.5 |
120.1 |
H8 |
C7 |
C8 |
C9 |
284.2 |
178.7 |
C8 |
C7 |
H8 |
H9 |
242.4 |
239.9 |
H8 |
C7 |
C8 |
H10 |
44.6 |
298.8 |
H8 |
C7 |
C8 |
H11 |
163.8 |
58.8 |
C6 |
C7 |
H9 |
C8 |
124.9 |
119.8 |
H9 |
C7 |
C6 |
H6 |
316.6 |
174.9 |
H9 |
C7 |
C6 |
H7 |
76.6 |
54.5 |
C6 |
C7 |
H9 |
H8 |
242.5 |
239.9 |
H9 |
C7 |
C8 |
C9 |
165.8 |
58.6 |
C8 |
C7 |
H9 |
H8 |
117.6 |
120.1 |
H9 |
C7 |
C8 |
H10 |
286.2 |
178.6 |
H9 |
C7 |
C8 |
H11 |
45.3 |
298.6 |
C7 |
C8 |
H10 |
C9 |
237.5 |
239.9 |
H10 |
C8 |
C7 |
H8 |
44.6 |
298.8 |
H10 |
C8 |
C7 |
H9 |
286.2 |
178.6 |
C7 |
C8 |
H10 |
H11 |
118.7 |
120.0 |
C9 |
C8 |
H10 |
H11 |
241.2 |
240.0 |
H10 |
C8 |
C9 |
H12 |
305.1 |
61.3 |
H10 |
C8 |
C9 |
H13 |
65.1 |
181.4 |
C7 |
C8 |
H11 |
C9 |
122.5 |
120.0 |
H11 |
C8 |
C7 |
H8 |
163.8 |
58.8 |
H11 |
C8 |
C7 |
H9 |
45.3 |
298.6 |
C7 |
C8 |
H11 |
H10 |
241.3 |
240.0 |
C9 |
C8 |
H11 |
H10 |
118.8 |
120.0 |
H11 |
C8 |
C9 |
H12 |
185.9 |
301.3 |
H11 |
C8 |
C9 |
H13 |
305.9 |
61.4 |
H12 |
C9 |
C8 |
H10 |
305.1 |
61.3 |
H12 |
C9 |
C8 |
H11 |
185.9 |
301.3 |
C8 |
C9 |
H12 |
H13 |
120.0 |
120.0 |
C10 |
C9 |
H12 |
H13 |
240.0 |
239.8 |
H13 |
C9 |
C8 |
H10 |
65.1 |
181.4 |
H13 |
C9 |
C8 |
H11 |
305.9 |
61.4 |
C8 |
C9 |
H13 |
H12 |
240.0 |
240.0 |
C10 |
C9 |
H13 |
H12 |
120.0 |
120.2 |
N |
C10 |
H14 |
C9 |
116.5 |
119.4 |
H14 |
C10 |
C9 |
H12 |
60.9 |
305.4 |
H14 |
C10 |
C9 |
H13 |
300.9 |
185.2 |
C13 |
C12 |
H15 |
H16 |
120.2 |
240.0 |
C13 |
C12 |
H16 |
H15 |
239.8 |
120.1 |
C14 |
C13 |
H17 |
H18 |
119.1 |
240.0 |
H17 |
C13 |
C12 |
H15 |
238.2 |
180.0 |
H17 |
C13 |
C12 |
H16 |
358.3 |
60.0 |
C14 |
C13 |
H18 |
H17 |
241.0 |
120.0 |
H18 |
C13 |
C12 |
H15 |
118.8 |
300.0 |
H18 |
C13 |
C12 |
H16 |
238.9 |
180.0 |
H19 |
C14 |
C13 |
H17 |
99.0 |
180.0 |
H19 |
C14 |
C13 |
H18 |
218.4 |
60.0 |
H20 |
C14 |
H19 |
C15 |
|
120.0 |
H19 |
C14 |
C15 |
C16 |
|
330.0 |
H20 |
C14 |
C13 |
H17 |
217.5 |
300.0 |
H20 |
C14 |
C13 |
H18 |
336.8 |
180.0 |
H19 |
C14 |
H20 |
C15 |
|
240.0 |
H20 |
C14 |
C15 |
C16 |
|
210.0 |
C15 |
C14 |
C13 |
H17 |
|
60.0 |
C15 |
C14 |
C13 |
H18 |
|
300.0 |
H19 |
C14 |
C15 |
H20 |
|
120.0 |
C14 |
C15 |
C16 |
C17 |
|
180.0 |
C14 |
C15 |
C16 |
H21 |
|
0.0 |
C15 |
C16 |
C17 |
C18 |
|
0.0 |
C17 |
C16 |
C15 |
H21 |
|
180.0 |
C15 |
C16 |
C17 |
H22 |
|
180.0 |
C15 |
C16 |
C17 |
H21 |
|
180.0 |
C16 |
C17 |
C18 |
N19 |
|
360.0 |
C18 |
C17 |
C16 |
H22 |
|
180.0 |
C16 |
C17 |
C18 |
H23 |
|
180.0 |
C18 |
C17 |
C16 |
H21 |
|
180.0 |
C16 |
C17 |
C18 |
H22 |
|
180.0 |
C17 |
C18 |
N19 |
C20 |
|
359.8 |
N19 |
C18 |
C17 |
H23 |
|
180.0 |
N19 |
C18 |
C17 |
H22 |
|
180.0 |
C17 |
C18 |
N19 |
H23 |
|
180.0 |
C18 |
N19 |
C20 |
H25 |
|
180.0 |
C20 |
N19 |
C18 |
H23 |
|
179.7 |
C20 |
C15 |
C16 |
H21 |
|
180.3 |
C15 |
C16 |
H21 |
C17 |
|
180.0 |
H21 |
C16 |
C17 |
C18 |
|
180.0 |
H21 |
C16 |
C17 |
H22 |
|
360.0 |
C16 |
C17 |
H22 |
C18 |
|
180.0 |
H22 |
C17 |
C16 |
H21 |
|
360.0 |
H22 |
C17 |
C18 |
N19 |
|
180.0 |
H22 |
C17 |
C18 |
H23 |
|
0.0 |
C17 |
C18 |
H23 |
N19 |
|
180.0 |
H23 |
C18 |
C17 |
H22 |
|
0.0 |
H23 |
C18 |
N19 |
C20 |
|
179.7 |
N1 |
C2 |
C1 |
H2 |
|
360.0 |
N1 |
C2 |
C3 |
C4 |
|
180.0 |
N1 |
C2 |
C3 |
H4 |
|
0.0 |
O4 |
N1 |
C2 |
O5 |
|
180.0 |
C2 |
N1 |
O4 |
O5 |
|
180.0 |
C2 |
N1 |
O5 |
O4 |
|
180.0 |