Atom Nomenclature for 4EW

The atom nomenclature in PDB data files was revised with the release of data in the PDB Format Version 3.0. These changes make the PDB atom names used by PDB compliant with existing IUPAC nomenclature for standard amino acid and nucleotides (Pure & Appl. Chem., 70, 117-142, 1998) with the exception of the well established convention for C-terminal atoms OXT and HXT. A small number of additional changes were introduced in Version 3 to make atom labeling more conventional. The following chemical diagrams and tables provide the correspondences between atom names used in Version 3 and Version 2 PDB formats.

Labeled Chemical Diagrams

Chemical diagram with format V3 atom labels (heavy atoms)
Chemical diagram with format V3 atom labels (all atoms)
Chemical diagram with format V2 atom labels (heavy atoms)
Chemical diagram with format V2 atom labels (all atoms)

Atom Name Correspondences for 4EW

Atom Name (V3) Atom Name (V2)
C23 C1
C24 C2
C25 C3
C26 C4
C27 C5
C28 C6
C1 C7
C2 C8
C3 C9
N4 N1
C5 C10
C6 C11
C7 C12
C8 C13
N9 N2
C11 C14
N12 N3
C13 C15
C14 C16
C15 C17
N16 N4
N17 N5
C18 C18
C20 C19
C22 C20
N29 N6
N31 N7
N32 N8
N33 N9
F34 F1
CL3 CL1
H1 H1
H2 H2
H3 H3
H4 H4
H5 H5
H6 H6
H7 H7
H8 H8
H9 H9
H10 H10
H11 H11
H12 H12
H13 H13
H14 H14
H15 H15
H16 H16
H17 H17
H18 H18
H19 H19