PDB Chemical Component 4DX

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 4DX

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.549	1.530
C2	C3	1.508	1.530
C2	C7	1.511	1.530
C3	C4	1.504	1.530
C4	C5	1.506	1.530
C5	C6	1.508	1.530
C6	C7	1.502	1.530
C7	O8	1.402	1.430
C1	H1	1.100	1.091
C1	H1A	1.100	1.090
C1	H1B	1.100	1.090
C2	H2	1.100	1.090
C3	H3	1.100	1.090
C3	H3A	1.100	1.091
C4	H4	1.100	1.090
C4	H4A	1.100	1.091
C5	H5	1.101	1.091
C5	H5A	1.100	1.090
C6	H6	1.100	1.091
C6	H6A	1.100	1.090
C7	H7	1.100	1.090
O8	HO8	0.951	0.967

Bond Angles for 4DX

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C1	C2	C3	106.7	109.5
C1	C2	C7	106.4	109.4
C2	C1	H1	109.5	109.4
C2	C1	H1A	109.5	109.5
C2	C1	H1B	109.5	109.5
C1	C2	H2	114.5	109.5
C3	C2	C7	113.0	109.5
C2	C3	C4	115.2	109.5
C3	C2	H2	108.1	109.5
C2	C3	H3	107.6	109.5
C2	C3	H3A	107.6	109.5
C2	C7	C6	117.4	109.5
C2	C7	O8	112.1	109.5
C7	C2	H2	108.3	109.5
C2	C7	H7	104.4	109.5
C3	C4	C5	116.0	109.5
C4	C3	H3	107.6	109.5
C4	C3	H3A	107.6	109.4
C3	C4	H4	107.3	109.5
C3	C4	H4A	107.3	109.4
C4	C5	C6	109.9	109.4
C5	C4	H4	107.4	109.5
C5	C4	H4A	107.3	109.5
C4	C5	H5	109.3	109.5
C4	C5	H5A	109.3	109.5
C5	C6	C7	117.6	109.5
C6	C5	H5	109.3	109.5
C6	C5	H5A	109.3	109.5
C5	C6	H6	106.8	109.5
C5	C6	H6A	106.9	109.5
C6	C7	O8	116.5	109.5
C7	C6	H6	106.9	109.4
C7	C6	H6A	106.8	109.5
C6	C7	H7	98.2	109.4
O8	C7	H7	105.6	109.5
C7	O8	HO8	109.5	114.0
H1	C1	H1A	109.5	109.5
H1	C1	H1B	109.4	109.4
H1A	C1	H1B	109.5	109.5
H3	C3	H3A	111.2	109.5
H4	C4	H4A	111.5	109.4
H5	C5	H5A	109.6	109.5
H6	C6	H6A	111.9	109.5

Torsion Angles for 4DX

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C3	C2	C1	C7	239.1	240.0
C1	C2	C3	C4	113.2	179.9
C3	C2	C1	H2	119.5	120.0
C1	C2	C3	H3	233.2	300.0
C1	C2	C3	H3A	353.2	60.0
C1	C2	C7	C6	284.2	180.0
C1	C2	C7	O8	145.4	60.0
C7	C2	C1	H2	240.4	240.0
C1	C2	C7	H7	31.6	300.0
H1	C1	C2	H1A	240.0	240.0
H1	C1	C2	H1B	120.0	119.9
H1A	C1	C2	H1B	240.0	239.9
C1	C2	C3	C7	116.6	119.9
C3	C2	C1	H1	180.0	60.0
C3	C2	C1	H1A	300.0	180.0
C3	C2	C1	H1B	60.0	300.1
C1	C2	C3	H2	236.5	240.0
C3	C2	C7	C6	41.0	300.0
C3	C2	C7	O8	262.1	180.0
C7	C2	C3	H2	119.9	120.0
C3	C2	C7	H7	148.3	60.0
C2	C3	C4	C5	315.4	300.0
C4	C3	C2	H3	240.0	240.0
C4	C3	C2	H3A	120.0	120.0
C2	C3	C4	H4	75.4	60.0
C2	C3	C4	H4A	195.4	180.0
H3	C3	C2	H3A	240.0	240.0
C1	C2	C7	C3	243.3	240.0
C7	C2	C1	H1	300.9	180.0
C7	C2	C1	H1A	60.9	300.0
C7	C2	C1	H1B	180.9	60.1
C1	C2	C7	H2	123.5	120.0
C7	C2	C3	C4	356.6	60.0
C3	C2	C7	H2	240.3	240.0
C7	C2	C3	H3	116.7	180.0
C7	C2	C3	H3A	236.6	300.0
C5	C6	C7	C2	327.9	60.0
C6	C7	C2	O8	138.8	120.0
C2	C7	C6	H6	207.9	300.0
C2	C7	C6	H6A	87.9	180.0
C6	C7	C2	H7	252.6	240.0
O8	C7	C2	H7	113.8	120.0
C2	C7	O8	HO8	180.0	179.9
C4	C3	C2	C7	356.6	60.0
C4	C3	C2	H2	236.8	300.0
C2	C3	C4	H3	120.0	120.0
C2	C3	C4	H3A	240.0	240.0
C3	C4	C5	C6	52.9	60.0
C5	C4	C3	H4	240.0	239.9
C5	C4	C3	H4A	120.0	120.0
C3	C4	C5	H5	172.9	180.0
C3	C4	C5	H5A	292.9	300.0
H3	C3	C4	H3A	120.0	120.0
H4	C4	C3	H4A	240.0	240.1
C5	C4	C3	H3	195.4	180.0
C5	C4	C3	H3A	75.4	60.0
C3	C4	C5	H4	120.0	120.1
C3	C4	C5	H4A	240.0	240.0
C4	C5	C6	C7	345.8	300.0
C6	C5	C4	H5	240.0	240.0
C6	C5	C4	H5A	120.0	120.0
C4	C5	C6	H6	105.8	60.0
C4	C5	C6	H6A	225.8	180.0
H4	C4	C5	H4A	120.0	120.0
H5	C5	C4	H5A	240.0	240.0
C2	C7	C6	C5	327.9	60.0
C6	C5	C4	H4	292.9	300.0
C6	C5	C4	H4A	172.9	180.0
C4	C5	C6	H5	120.0	120.0
C4	C5	C6	H5A	240.0	240.0
C5	C6	C7	O8	105.0	180.0
C7	C6	C5	H6	240.0	240.0
C7	C6	C5	H6A	120.0	120.0
C5	C6	C7	H7	217.0	300.0
H5	C5	C6	H5A	120.0	120.0
H6	C6	C5	H6A	240.0	240.0
C2	C7	C6	O8	223.0	240.0
C6	C7	C2	H2	160.7	60.0
C2	C7	C6	H7	110.9	120.0
C7	C6	C5	H5	225.8	180.0
C7	C6	C5	H5A	105.8	60.0
C5	C6	C7	H6	120.0	120.0
C5	C6	C7	H6A	240.0	240.0
O8	C7	C6	H7	248.0	240.0
C6	C7	O8	HO8	40.8	59.9
H6	C6	C7	H6A	120.0	120.0
C2	C7	O8	C6	139.2	120.0
O8	C7	C2	H2	21.8	300.0
C2	C7	O8	H7	247.0	239.9
O8	C7	C6	H6	344.9	60.0
O8	C7	C6	H6A	225.0	300.0
C6	C7	O8	H7	107.8	119.9
H1	C1	C2	C3	180.0	60.0
H1	C1	C2	C7	300.9	180.0
C2	C1	H1	H1A	120.0	120.0
C2	C1	H1	H1B	240.0	240.0
H1	C1	C2	H2	60.5	300.0
H1A	C1	H1	H1B	120.0	120.0
H1A	C1	C2	C3	300.0	180.0
H1A	C1	C2	C7	60.9	300.0
C2	C1	H1A	H1	240.0	240.0
C2	C1	H1A	H1B	120.0	120.1
H1A	C1	C2	H2	180.5	60.0
H1	C1	H1A	H1B	240.0	240.0
H1B	C1	C2	C3	60.0	300.1
H1B	C1	C2	C7	180.9	60.1
C2	C1	H1B	H1	120.0	119.9
C2	C1	H1B	H1A	240.0	239.9
H1B	C1	C2	H2	300.5	180.0
H1	C1	H1B	H1A	120.0	120.0
C1	C2	H2	C3	118.7	120.0
C1	C2	H2	C7	241.5	240.1
H2	C2	C1	H1	60.5	300.0
H2	C2	C1	H1A	180.5	60.0
H2	C2	C1	H1B	300.5	180.0
C3	C2	H2	C7	122.8	120.0
H2	C2	C3	C4	236.8	300.0
H2	C2	C3	H3	356.8	60.0
H2	C2	C3	H3A	116.8	180.0
H2	C2	C7	C6	160.7	60.0
H2	C2	C7	O8	21.8	300.0
H2	C2	C7	H7	268.1	180.0
H3	C3	C2	C7	116.7	180.0
C2	C3	H3	C4	235.3	240.0
H3	C3	C2	H2	356.8	60.0
C2	C3	H3	H3A	117.7	120.0
H3	C3	C4	C5	195.4	180.0
C4	C3	H3	H3A	242.3	240.0
H3	C3	C4	H4	315.4	300.0
H3	C3	C4	H4A	75.4	60.0
H3A	C3	C2	C7	236.6	300.0
C2	C3	H3A	C4	124.7	120.0
H3A	C3	C2	H2	116.8	180.0
C2	C3	H3A	H3	242.3	240.0
H3A	C3	C4	C5	75.4	60.0
C4	C3	H3A	H3	117.7	120.0
H3A	C3	C4	H4	195.5	180.0
H3A	C3	C4	H4A	315.4	300.0
C3	C4	H4	C5	234.6	239.9
H4	C4	C3	H3	315.4	300.0
H4	C4	C3	H3A	195.5	180.0
C3	C4	H4	H4A	117.3	119.9
H4	C4	C5	C6	292.9	300.0
C5	C4	H4	H4A	242.7	240.0
H4	C4	C5	H5	52.9	59.9
H4	C4	C5	H5A	172.9	179.9
C3	C4	H4A	C5	125.4	120.0
H4A	C4	C3	H3	75.4	60.0
H4A	C4	C3	H3A	315.4	300.0
C3	C4	H4A	H4	242.7	240.0
H4A	C4	C5	C6	172.9	180.0
C5	C4	H4A	H4	117.3	120.0
H4A	C4	C5	H5	292.9	300.0
H4A	C4	C5	H5A	52.9	60.0
C4	C5	H5	C6	239.7	240.0
H5	C5	C4	H4	52.9	59.9
H5	C5	C4	H4A	292.9	300.0
C4	C5	H5	H5A	119.8	120.0
H5	C5	C6	C7	225.8	180.0
C6	C5	H5	H5A	240.2	240.0
H5	C5	C6	H6	345.8	300.0
H5	C5	C6	H6A	105.8	60.0
C4	C5	H5A	C6	120.3	120.0
H5A	C5	C4	H4	172.9	179.9
H5A	C5	C4	H4A	52.9	60.0
C4	C5	H5A	H5	240.2	240.0
H5A	C5	C6	C7	105.8	60.0
C6	C5	H5A	H5	119.9	120.0
H5A	C5	C6	H6	225.8	180.0
H5A	C5	C6	H6A	345.8	300.0
C5	C6	H6	C7	233.3	240.0
H6	C6	C5	H5	345.8	300.0
H6	C6	C5	H5A	225.8	180.0
C5	C6	H6	H6A	116.6	120.0
H6	C6	C7	O8	344.9	60.0
C7	C6	H6	H6A	243.4	240.0
H6	C6	C7	H7	97.0	180.0
C5	C6	H6A	C7	126.7	120.0
H6A	C6	C5	H5	105.8	60.0
H6A	C6	C5	H5A	345.8	300.0
C5	C6	H6A	H6	243.4	240.0
H6A	C6	C7	O8	225.0	300.0
C7	C6	H6A	H6	116.6	120.0
H6A	C6	C7	H7	337.0	60.0
C2	C7	H7	C6	238.9	240.0
C2	C7	H7	O8	118.4	120.1
H7	C7	C2	H2	268.1	180.0
C6	C7	H7	O8	239.4	240.0
H7	C7	C6	H6	97.0	180.0
H7	C7	C6	H6A	337.0	60.0
H7	C7	O8	HO8	293.0	300.0
HO8	O8	C7	H7	293.0	300.0