PDB Chemical Component 4CY
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 4CY
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C |
CA |
1.524 |
1.507 |
| N |
H |
1.000 |
1.009 |
| O |
C |
1.188 |
1.208 |
| CA |
N |
1.448 |
1.469 |
| CA |
CB |
1.522 |
1.529 |
| CB |
CG |
1.528 |
1.530 |
| CB |
HB |
1.100 |
1.090 |
| CB |
HBA |
1.099 |
1.091 |
| CCS |
NSC |
1.135 |
1.136 |
| SD |
CCS |
1.820 |
1.810 |
| CG |
SD |
1.805 |
1.811 |
| CG |
HG |
1.100 |
1.089 |
| CG |
HGA |
1.100 |
1.090 |
| OXT |
C |
1.326 |
1.343 |
| OXT |
HXT |
0.949 |
0.967 |
| N |
H2 |
1.000 |
1.010 |
| CA |
HA |
1.100 |
1.089 |
Bond Angles for 4CY
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O |
C |
CA |
119.4 |
120.0 |
| C |
CA |
N |
118.2 |
109.5 |
| C |
CA |
CB |
111.8 |
109.4 |
| C |
CA |
HA |
104.2 |
109.5 |
| CA |
N |
H |
109.5 |
111.0 |
| H |
N |
H2 |
109.4 |
111.0 |
| CA |
N |
H2 |
109.5 |
111.0 |
| CA |
CB |
CG |
116.6 |
109.5 |
| CA |
CB |
HB |
107.2 |
109.5 |
| CA |
CB |
HBA |
107.2 |
109.5 |
| CB |
CA |
HA |
105.9 |
109.5 |
| CG |
CB |
HB |
107.1 |
109.5 |
| CG |
CB |
HBA |
107.2 |
109.4 |
| CB |
CG |
SD |
113.8 |
109.4 |
| CB |
CG |
HG |
108.1 |
109.5 |
| CB |
CG |
HGA |
108.0 |
109.4 |
| HB |
CB |
HBA |
111.7 |
109.5 |
| SD |
CCS |
NSC |
177.4 |
180.0 |
| HG |
CG |
HGA |
110.8 |
109.5 |
Torsion Angles for 4CY
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C |
CA |
N |
H |
180.0 |
296.0 |
| C |
CA |
N |
H2 |
300.0 |
60.0 |
| C |
CA |
CB |
CG |
57.2 |
175.0 |
| C |
CA |
CB |
HB |
177.2 |
295.1 |
| C |
CA |
CB |
HBA |
297.2 |
55.1 |
| CB |
CA |
C |
HA |
246.1 |
239.9 |
| CA |
N |
H |
H2 |
120.0 |
123.9 |
| O |
C |
CA |
N |
287.4 |
340.0 |
| O |
C |
CA |
CB |
67.8 |
100.0 |
| O |
C |
CA |
HA |
181.7 |
220.1 |
| C |
CA |
N |
CB |
138.4 |
120.0 |
| C |
CA |
N |
HA |
250.0 |
240.0 |
| H |
N |
CA |
H2 |
240.0 |
236.1 |
| C |
CA |
CB |
N |
219.1 |
240.0 |
| C |
CA |
CB |
HA |
112.9 |
120.0 |
| CB |
CA |
N |
H |
41.6 |
176.1 |
| CB |
CA |
N |
H2 |
161.6 |
300.0 |
| CG |
CB |
CA |
HB |
240.0 |
239.9 |
| CG |
CB |
CA |
HBA |
120.0 |
119.9 |
| CA |
CB |
CG |
SD |
84.0 |
180.0 |
| CA |
CB |
CG |
HG |
204.0 |
300.0 |
| CA |
CB |
CG |
HGA |
324.0 |
60.1 |
| HB |
CB |
CA |
HBA |
240.0 |
240.0 |
| CA |
CB |
CG |
HB |
120.0 |
120.1 |
| CA |
CB |
CG |
HBA |
240.0 |
240.1 |
| CG |
CB |
CA |
HA |
304.3 |
55.0 |
| HB |
CB |
CG |
HBA |
120.0 |
120.0 |
| HG |
CG |
CB |
HGA |
240.0 |
239.9 |
| CA |
CB |
HB |
CG |
234.1 |
240.0 |
| CA |
CB |
HB |
HBA |
117.1 |
120.0 |
| HB |
CB |
CA |
HA |
64.3 |
175.0 |
| CG |
CB |
HB |
HBA |
243.0 |
240.0 |
| HB |
CB |
CG |
SD |
324.0 |
59.9 |
| HB |
CB |
CG |
HG |
84.0 |
179.9 |
| HB |
CB |
CG |
HGA |
204.0 |
300.0 |
| CA |
CB |
HBA |
CG |
125.9 |
119.9 |
| CA |
CB |
HBA |
HB |
242.9 |
240.0 |
| HBA |
CB |
CA |
HA |
184.3 |
295.0 |
| CG |
CB |
HBA |
HB |
117.0 |
120.0 |
| HBA |
CB |
CG |
SD |
204.0 |
300.0 |
| HBA |
CB |
CG |
HG |
324.0 |
60.0 |
| HBA |
CB |
CG |
HGA |
84.0 |
180.0 |
| CB |
CG |
SD |
CCS |
52.0 |
180.0 |
| SD |
CG |
CB |
HB |
324.0 |
59.9 |
| SD |
CG |
CB |
HBA |
204.0 |
300.0 |
| CB |
CG |
SD |
HG |
120.0 |
120.0 |
| CB |
CG |
SD |
HGA |
240.0 |
240.1 |
| CG |
SD |
CCS |
NSC |
356.9 |
52.3 |
| HG |
CG |
CB |
HB |
84.0 |
179.9 |
| HG |
CG |
CB |
HBA |
324.0 |
60.0 |
| CB |
CG |
HG |
SD |
236.4 |
240.0 |
| CB |
CG |
HG |
HGA |
118.2 |
120.0 |
| HGA |
CG |
CB |
HB |
204.0 |
300.0 |
| HGA |
CG |
CB |
HBA |
84.0 |
180.0 |
| CB |
CG |
HGA |
SD |
123.6 |
119.9 |
| CB |
CG |
HGA |
HG |
241.8 |
240.0 |
| OXT |
C |
CA |
HA |
2.7 |
40.2 |
| CA |
N |
H2 |
H |
240.0 |
236.0 |
| C |
CA |
HA |
N |
121.3 |
120.0 |
| C |
CA |
HA |
CB |
241.9 |
240.0 |
| HA |
CA |
N |
H |
290.0 |
56.0 |
| HA |
CA |
N |
H2 |
50.0 |
180.0 |
| HA |
CA |
CB |
CG |
304.3 |
55.0 |
| HA |
CA |
CB |
HB |
64.3 |
175.0 |
| HA |
CA |
CB |
HBA |
184.3 |
295.0 |