PDB Chemical Component 4CT

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 4CT

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N1 C2 1.387 1.321
N1 C6 1.349 1.328
CL1 C11 1.816 1.736
C2 N3 1.354 1.315
N3 C4 1.357 1.336
C4 C5 1.409 1.407
C4 C9 1.405 1.459
C5 C6 1.396 1.399
C5 N7 1.390 1.375
C6 N6 1.390 1.386
N7 C8 1.399 1.364
C8 C9 1.438 1.346
C9 C10 1.571 1.506
C1' N1' 1.495 1.485
C1' C4' 1.583 1.544
N1' C10 1.465 1.470
N1' C2' 1.464 1.486
C11 C13 1.393 1.384
C11 C9' 1.400 1.383
C13 C14 1.426 1.380
C14 C7' 1.441 1.390
C2' C3' 1.549 1.544
C3' O3' 1.467 1.429
C3' C4' 1.519 1.543
C4' C5' 1.554 1.529
C5' S6' 1.813 1.814
S6' C7' 1.714 1.762
C7' C8' 1.402 1.389
C8' C9' 1.401 1.381
C2 H2 1.081 1.080
N6 HN6 1.000 0.970
N6 HN6A 1.000 0.970
N7 HN7 1.000 0.970
C8 H8 1.080 1.081
C1' H1' 1.100 1.090
C1' H1'A 1.100 1.090
C10 H10 1.100 1.090
C10 H10A 1.100 1.090
C13 H13 1.080 1.080
C14 H14 1.080 1.081
C2' H2' 1.100 1.089
C2' H2'A 1.100 1.091
C3' H3' 1.100 1.091
O3' HO3' 0.950 0.967
C4' H4' 1.100 1.091
C5' H5' 1.100 1.090
C5' H5'A 1.100 1.090
C8' H8' 1.080 1.080
C9' H9' 1.080 1.080

Bond Angles for 4CT

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 N1 C6 118.4 121.4
N1 C2 N3 122.2 122.4
N1 C2 H2 118.9 118.8
N1 C6 C5 120.5 118.6
N1 C6 N6 119.4 120.7
CL1 C11 C13 116.7 119.9
CL1 C11 C9' 121.3 119.9
C2 N3 C4 120.4 120.4
N3 C2 H2 118.9 118.8
N3 C4 C5 118.6 119.1
N3 C4 C9 130.1 134.9
C5 C4 C9 111.3 106.0
C4 C5 C6 119.8 118.1
C4 C5 N7 107.6 107.3
C4 C9 C8 103.1 107.0
C4 C9 C10 133.1 126.5
C6 C5 N7 132.6 134.6
C5 C6 N6 120.2 120.6
C5 N7 C8 107.1 109.8
C5 N7 HN7 126.4 125.1
C6 N6 HN6 109.5 119.9
C6 N6 HN6A 109.5 120.1
N7 C8 C9 110.9 109.9
C8 N7 HN7 126.4 125.1
N7 C8 H8 124.5 125.1
C8 C9 C10 123.8 126.5
C9 C8 H8 124.5 125.0
C9 C10 N1' 109.7 109.5
C9 C10 H10 109.4 109.5
C9 C10 H10A 109.4 109.5
N1' C1' C4' 99.4 104.6
C1' N1' C10 121.5 111.0
C1' N1' C2' 117.8 104.2
N1' C1' H1' 113.0 110.4
N1' C1' H1'A 113.0 110.4
C1' C4' C3' 104.4 105.0
C1' C4' C5' 111.0 110.4
C4' C1' H1' 113.0 110.4
C4' C1' H1'A 113.0 110.4
C1' C4' H4' 113.8 110.3
C10 N1' C2' 117.6 111.0
N1' C10 H10 109.4 109.5
N1' C10 H10A 109.4 109.4
N1' C2' C3' 99.8 104.6
N1' C2' H2' 112.8 110.4
N1' C2' H2'A 112.8 110.4
C13 C11 C9' 121.9 120.2
C11 C13 C14 116.8 120.0
C11 C13 H13 121.6 120.0
C11 C9' C8' 121.0 120.1
C11 C9' H9' 119.5 120.0
C13 C14 C7' 122.1 120.0
C14 C13 H13 121.6 120.0
C13 C14 H14 119.0 120.0
C14 C7' S6' 115.7 120.1
C14 C7' C8' 118.1 119.8
C7' C14 H14 119.0 120.0
C2' C3' O3' 102.8 110.3
C2' C3' C4' 106.5 105.1
C3' C2' H2' 112.8 110.4
C3' C2' H2'A 112.8 110.4
C2' C3' H3' 115.8 110.4
O3' C3' C4' 110.6 110.3
O3' C3' H3' 112.1 110.2
C3' O3' HO3' 109.5 114.0
C3' C4' C5' 114.8 110.3
C4' C3' H3' 108.8 110.4
C3' C4' H4' 110.0 110.3
C4' C5' S6' 110.9 109.5
C5' C4' H4' 103.3 110.4
C4' C5' H5' 109.0 109.5
C4' C5' H5'A 109.0 109.5
C5' S6' C7' 102.9 103.0
S6' C5' H5' 109.0 109.5
S6' C5' H5'A 109.0 109.5
S6' C7' C8' 126.1 120.1
C7' C8' C9' 119.7 119.9
C7' C8' H8' 120.2 120.0
C9' C8' H8' 120.1 120.0
C8' C9' H9' 119.5 119.9
HN6 N6 HN6A 109.5 120.0
H1' C1' H1'A 105.7 110.5
H10 C10 H10A 109.6 109.5
H2' C2' H2'A 105.9 110.5
H5' C5' H5'A 109.9 109.5

Torsion Angles for 4CT

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 N1 C6 C5 356.7 359.9
C2 N1 C6 N6 177.5 180.0
N1 C2 N3 C4 358.8 360.0
N3 C2 N1 H2 180.0 180.0
C6 N1 C2 N3 3.5 0.1
C6 N1 C2 H2 183.5 180.0
C4 C5 C6 N1 1.0 0.0
N1 C6 C5 N7 179.3 180.0
C5 C6 N1 N6 179.2 180.0
N1 C6 N6 HN6 360.0 360.0
N1 C6 N6 HN6A 120.0 180.0
C13 C11 CL1 C9' 179.5 180.3
CL1 C11 C13 C14 178.4 180.0
CL1 C11 C13 H13 358.4 360.0
CL1 C11 C9' C8' 175.1 179.7
CL1 C11 C9' H9' 355.2 360.0
N3 C2 N1 C6 3.5 0.1
N1 C2 N3 H2 180.0 180.0
C2 N3 C4 C5 358.9 360.0
C2 N3 C4 C9 181.1 180.0
C4 N3 C2 H2 178.8 180.0
C5 C4 N3 C9 177.8 180.0
N3 C4 C5 C6 1.2 0.0
N3 C4 C5 N7 182.6 180.0
N3 C4 C9 C8 177.4 180.0
N3 C4 C9 C10 354.5 360.0
N1 C6 C5 C4 1.0 0.0
N3 C4 C5 C9 181.8 180.0
C5 C4 C9 C8 359.5 360.0
C5 C4 C9 C10 176.6 180.0
C6 C5 C4 N7 178.7 180.0
C4 C5 C6 N6 180.3 180.0
C4 C5 N7 C8 359.4 360.0
C4 C5 N7 HN7 179.4 180.0
N3 C4 C9 C5 177.9 180.0
C9 C4 C5 C6 179.4 180.0
C9 C4 C5 N7 0.7 0.0
N7 C8 C9 C4 0.1 0.0
C8 C9 C4 C10 182.9 180.0
C4 C9 C8 H8 180.1 180.0
C4 C9 C10 N1' 72.2 80.0
C4 C9 C10 H10 192.2 200.0
C4 C9 C10 H10A 312.3 320.0
N1 C6 C5 N6 180.8 180.0
C6 C5 C4 C9 179.4 180.0
C4 C5 C6 N7 181.7 180.0
C6 C5 N7 C8 181.0 180.0
C6 C5 N7 HN7 0.9 360.0
C5 C6 N6 HN6 180.7 180.0
C5 C6 N6 HN6A 300.7 360.0
N7 C5 C4 C9 0.7 0.0
C4 C5 N7 C6 178.4 180.0
N7 C5 C6 N6 358.5 0.0
C5 N7 C8 C9 0.3 0.0
C8 N7 C5 HN7 180.0 180.0
C5 N7 C8 H8 180.3 180.0
N1 C6 N6 C5 179.2 180.0
N6 C6 C5 N7 358.5 0.0
HN6 N6 C6 HN6A 240.0 180.0
C4 C9 C8 N7 0.1 0.0
C5 N7 C8 HN7 180.0 180.0
N7 C8 C9 C10 182.7 180.0
C9 C8 N7 H8 180.0 180.0
C4 C9 C8 C10 177.4 180.0
C9 C8 N7 HN7 180.3 180.0
N7 C8 C9 H8 180.0 180.0
C8 C9 C10 N1' 248.8 259.9
C8 C9 C10 H10 8.8 20.0
C8 C9 C10 H10A 128.9 140.0
C4 C9 C10 C8 183.4 180.0
C10 C9 C8 H8 2.7 360.0
C1' N1' C10 C9 72.8 190.0
C9 C10 N1' C2' 273.2 74.6
N1' C10 C9 H10 240.0 240.0
N1' C10 C9 H10A 120.0 120.0
H10 C10 C9 H10A 240.0 240.0
C9 C10 N1' C1' 72.8 190.0
N1' C1' C4' C3' 333.6 23.9
N1' C1' C4' C5' 97.8 142.8
C4' C1' N1' H1' 240.0 241.2
C4' C1' N1' H1'A 120.0 118.7
N1' C1' C4' H4' 213.7 265.0
C10 N1' C1' C2' 200.4 240.5
C1' N1' C10 H10 312.8 70.0
C1' N1' C10 H10A 192.8 310.0
C1' N1' C2' C3' 12.2 39.5
C1' N1' C2' H2' 132.2 158.3
C1' N1' C2' H2'A 252.2 280.8
H1' C1' N1' H1'A 240.0 237.5
C4' C1' N1' C10 209.1 201.0
C4' C1' N1' C2' 8.7 320.5
N1' C1' C4' H1' 120.0 118.8
N1' C1' C4' H1'A 240.0 241.3
C2' C3' C4' C1' 36.1 360.0
O3' C3' C4' C1' 285.0 241.1
C3' C4' C1' C5' 235.8 241.1
C1' C4' C3' H3' 161.5 119.0
C3' C4' C1' H4' 119.9 118.8
C1' C4' C5' S6' 175.6 66.5
C5' C4' C1' H4' 244.1 237.7
C1' C4' C5' H5' 295.6 186.5
C1' C4' C5' H5'A 55.6 306.5
H1' C1' C4' H1'A 120.0 122.5
C9 C10 N1' H10 120.0 120.0
C9 C10 N1' H10A 240.0 240.0
C10 N1' C1' C4' 209.1 201.0
C1' N1' C10 C2' 159.6 115.4
C10 N1' C1' H1' 329.1 319.7
C10 N1' C1' H1'A 89.1 82.3
C10 N1' C2' C3' 172.6 159.0
C10 N1' C2' H2' 292.6 277.8
C10 N1' C2' H2'A 52.6 40.3
H10 C10 N1' H10A 120.0 120.0
C2' N1' C1' C4' 8.7 320.5
C1' N1' C2' C10 199.6 240.5
C2' N1' C1' H1' 128.7 79.3
C2' N1' C1' H1'A 248.7 201.8
C2' N1' C10 H10 153.2 314.6
C2' N1' C10 H10A 33.2 194.6
N1' C2' C3' O3' 87.1 95.1
N1' C2' C3' C4' 330.8 336.2
C3' C2' N1' H2' 240.0 241.2
C3' C2' N1' H2'A 120.0 118.7
N1' C2' C3' H3' 209.7 217.1
H2' C2' N1' H2'A 240.0 237.5
CL1 C11 C13 C9' 180.5 179.7
C13 C11 C9' C8' 355.7 359.4
C13 C11 C9' H9' 175.7 179.7
C11 C13 C14 C7' 5.0 360.0
C14 C13 C11 H13 180.0 180.1
C11 C13 C14 H14 185.0 180.0
CL1 C11 C9' C13 179.4 180.3
C9' C11 C13 C14 357.8 0.3
C9' C11 C13 H13 177.8 180.2
C7' C8' C9' C11 8.0 0.6
C11 C9' C8' H8' 188.0 180.3
C8' C9' C11 H9' 180.0 179.7
C14 C13 C11 C9' 357.8 0.3
C11 C13 C14 H13 180.0 179.9
C13 C14 C7' S6' 175.4 180.0
C13 C14 C7' C8' 358.6 0.1
C7' C14 C13 H14 180.0 180.0
C7' C14 C13 H13 185.0 180.0
C13 C14 C7' H14 180.0 180.0
C5' S6' C7' C14 91.4 180.0
S6' C7' C14 C8' 176.9 180.0
C14 C7' C8' C9' 354.9 359.7
C14 C7' C8' H8' 174.9 180.0
C1' C4' C3' C2' 36.1 360.0
N1' C2' C3' H2' 120.0 118.8
N1' C2' C3' H2'A 240.0 241.3
O3' C3' C2' C4' 116.3 118.9
O3' C3' C2' H3' 237.4 237.9
C2' C3' O3' HO3' 180.0 61.4
C2' C3' C4' C5' 274.3 241.1
C4' C3' C2' H3' 121.1 119.0
C2' C3' C4' H4' 158.5 118.8
H2' C2' C3' H2'A 120.0 122.5
C1' C4' C3' O3' 285.0 241.1
C2' C3' O3' C4' 246.6 244.3
O3' C3' C2' H2' 327.1 336.3
O3' C3' C2' H2'A 207.1 213.8
C2' C3' O3' H3' 125.0 122.1
O3' C3' C4' C5' 163.3 122.2
C4' C3' O3' H3' 238.5 237.8
O3' C3' C4' H4' 47.5 359.9
C1' C4' C3' C5' 121.7 118.9
C3' C4' C1' H1' 213.6 265.1
C3' C4' C1' H1'A 93.6 142.6
C1' C4' C3' H4' 237.6 241.1
C2' C3' C4' O3' 111.0 118.9
C4' C3' C2' H2' 210.8 217.3
C4' C3' C2' H2'A 90.8 94.9
C2' C3' C4' H3' 234.5 241.0
O3' C3' C4' H3' 123.5 122.1
C4' C3' O3' HO3' 293.4 177.1
C3' C4' C5' S6' 293.7 182.1
C5' C4' C3' H4' 115.8 122.2
C3' C4' C5' H5' 53.7 302.1
C3' C4' C5' H5'A 173.7 62.1
C1' C4' C5' C3' 241.9 244.4
C5' C4' C1' H1' 337.7 24.0
C5' C4' C1' H1'A 217.8 261.5
C1' C4' C5' H4' 122.3 122.2
C5' C4' C3' H3' 39.8 0.1
C3' C4' C5' H4' 240.3 237.8
C4' C5' S6' C7' 286.2 180.0
S6' C5' C4' H5' 240.0 240.0
S6' C5' C4' H5'A 120.0 120.0
H5' C5' C4' H5'A 240.0 240.0
C14 C7' S6' C5' 91.4 180.0
S6' C5' C4' H4' 53.3 304.2
C4' C5' S6' H5' 120.0 120.0
C4' C5' S6' H5'A 240.0 240.0
C5' S6' C7' C8' 268.0 0.0
H5' C5' S6' H5'A 120.0 120.0
C14 C7' S6' C8' 183.4 180.0
S6' C7' C14 H14 355.5 0.0
C7' S6' C5' H5' 166.2 60.0
C7' S6' C5' H5'A 46.2 300.0
S6' C7' C8' C9' 178.4 179.7
S6' C7' C8' H8' 358.4 0.0
C11 C9' C8' C7' 8.0 0.6
C14 C7' C8' S6' 176.5 180.0
C8' C7' C14 H14 178.6 180.0
C9' C8' C7' H8' 180.0 179.7
C7' C8' C9' H9' 188.0 180.3
C11 C9' C8' H9' 180.0 180.3
C7' C8' C9' H8' 180.0 180.3
H2 C2 N1 C6 183.5 180.0
N1 C2 H2 N3 180.0 180.0
H2 C2 N3 C4 178.8 180.0
C6 N6 HN6 HN6A 120.0 180.0
C6 N6 HN6A HN6 240.0 180.0
C5 N7 HN7 C8 180.0 180.0
HN7 N7 C8 C9 180.3 180.0
HN7 N7 C8 H8 0.3 0.0
N7 C8 H8 C9 180.0 180.0
H8 C8 N7 HN7 0.3 0.0
H8 C8 C9 C10 2.7 360.0
N1' C1' H1' C4' 248.2 244.8
H1' C1' N1' C10 329.1 319.7
H1' C1' N1' C2' 128.7 79.3
N1' C1' H1' H1'A 124.1 122.4
H1' C1' C4' C3' 213.6 265.1
H1' C1' C4' C5' 337.7 24.0
C4' C1' H1' H1'A 235.9 237.6
H1' C1' C4' H4' 93.7 146.2
N1' C1' H1'A C4' 111.9 115.1
H1'A C1' N1' C10 89.1 82.3
H1'A C1' N1' C2' 248.7 201.8
N1' C1' H1'A H1' 235.9 237.5
H1'A C1' C4' C3' 93.6 142.6
H1'A C1' C4' C5' 217.8 261.5
C4' C1' H1'A H1' 124.1 122.4
H1'A C1' C4' H4' 333.7 23.7
C9 C10 H10 N1' 239.8 240.0
C9 C10 H10 H10A 119.9 120.0
H10 C10 N1' C2' 153.2 314.6
N1' C10 H10 H10A 240.1 240.1
C9 C10 H10A N1' 120.1 120.0
C9 C10 H10A H10 240.1 240.0
H10A C10 N1' C2' 33.2 194.6
N1' C10 H10A H10 119.9 120.0
H13 C13 C11 C9' 177.8 180.2
C11 C13 H13 C14 180.0 180.1
H13 C13 C14 C7' 185.0 180.0
H13 C13 C14 H14 5.0 0.0
C13 C14 H14 C7' 180.0 180.0
H14 C14 C13 H13 5.0 0.0
H14 C14 C7' S6' 355.5 0.0
H14 C14 C7' C8' 178.6 180.0
N1' C2' H2' C3' 247.8 244.8
N1' C2' H2' H2'A 123.9 122.4
H2' C2' C3' O3' 327.1 336.3
H2' C2' C3' C4' 210.8 217.3
C3' C2' H2' H2'A 236.1 237.6
H2' C2' C3' H3' 89.7 98.3
N1' C2' H2'A C3' 112.2 115.1
N1' C2' H2'A H2' 236.1 237.5
H2'A C2' C3' O3' 207.1 213.8
H2'A C2' C3' C4' 90.8 94.9
C3' C2' H2'A H2' 123.9 122.4
H2'A C2' C3' H3' 329.7 335.9
C2' C3' H3' O3' 242.5 237.9
C2' C3' H3' C4' 119.9 115.7
H3' C3' C2' H2' 89.7 98.3
H3' C3' C2' H2'A 329.7 335.9
O3' C3' H3' C4' 237.4 237.8
H3' C3' O3' HO3' 55.0 299.3
H3' C3' C4' C5' 39.8 0.1
H3' C3' C4' H4' 284.0 237.8
HO3' O3' C3' C4' 293.4 177.1
HO3' O3' C3' H3' 55.0 299.3
C1' C4' H4' C3' 116.7 115.6
C1' C4' H4' C5' 239.6 237.8
H4' C4' C1' H1' 93.7 146.2
H4' C4' C1' H1'A 333.7 23.7
C3' C4' H4' C5' 122.9 122.2
H4' C4' C3' H3' 284.0 237.8
H4' C4' C5' S6' 53.3 304.2
H4' C4' C5' H5' 173.3 64.3
H4' C4' C5' H5'A 293.3 184.3
C4' C5' H5' S6' 238.8 240.0
H5' C5' C4' H4' 173.3 64.3
C4' C5' H5' H5'A 119.4 120.0
H5' C5' S6' C7' 166.2 60.0
S6' C5' H5' H5'A 240.6 240.0
C4' C5' H5'A S6' 121.2 120.0
H5'A C5' C4' H4' 293.3 184.3
C4' C5' H5'A H5' 240.6 240.0
H5'A C5' S6' C7' 46.2 300.0
S6' C5' H5'A H5' 119.4 120.0
C7' C8' H8' C9' 180.0 179.7
H8' C8' C9' H9' 8.0 0.0
C11 C9' H9' C8' 180.0 179.7
H9' C9' C8' H8' 8.0 0.0