PDB Chemical Component 4AC

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 4AC

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
OP3 P   1.617
OP3 HOP3   0.980
P OP1 1.488 1.501
P OP2 1.500 1.618
P O5' 1.588 1.619
OP2 HOP2 0.949 0.980
O5' C5' 1.449 1.416
C5' C4' 1.513 1.523
C5' H5' 1.100 1.092
C5' H5'' 1.100 1.091
C4' O4' 1.412 1.444
C4' C3' 1.523 1.523
C4' H4' 1.100 1.095
O4' C1' 1.444 1.437
C3' O3' 1.430 1.427
C3' C2' 1.527 1.514
C3' H3' 1.100 1.093
O3' HO3' 0.950 0.969
C2' O2' 1.421 1.413
C2' C1' 1.520 1.519
C2' H2' 1.100 1.097
O2' HO2' 0.950 0.973
C1' N1 1.479 1.435
C1' H1' 1.100 1.094
N1 C2 1.386 1.418
N1 C6 1.364 1.387
C2 O2 1.228 1.233
C2 N3 1.367 1.385
N3 C4 1.365 1.307
C4 N4 1.331 1.364
C4 C5 1.422 1.485
N4 C7 1.339 1.386
N4 H4 1.000 1.017
C5 C6 1.341 1.332
C5 H5 1.080 1.082
C6 H6 1.080 1.084
C7 O7 1.255 1.230
C7 CM7 1.516 1.505
CM7 HM71 1.100 1.093
CM7 HM72 1.100 1.094
CM7 HM73 1.100 1.094

Bond Angles for 4AC

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
P OP3 HOP3   119.0
OP3 P OP1   115.3
OP3 P OP2   103.3
OP3 P O5'   103.8
OP1 P OP2 111.8 114.9
OP1 P O5' 114.7 115.0
OP2 P O5' 111.5 102.9
P OP2 HOP2 109.5 119.0
P O5' C5' 121.5 118.5
O5' C5' C4' 107.2 108.6
O5' C5' H5' 110.7 109.2
O5' C5' H5'' 110.2 109.3
C4' C5' H5' 110.8 110.1
C4' C5' H5'' 110.2 110.1
C5' C4' O4' 110.4 108.2
C5' C4' C3' 115.1 113.3
C5' C4' H4' 103.6 109.3
H5' C5' H5'' 107.7 109.6
O4' C4' C3' 105.1 105.9
O4' C4' H4' 113.9 107.7
C4' O4' C1' 110.1 109.2
C3' C4' H4' 109.0 112.2
C4' C3' O3' 113.6 107.9
C4' C3' C2' 101.6 102.1
C4' C3' H3' 113.1 114.5
O4' C1' C2' 106.5 106.5
O4' C1' N1 110.0 109.0
O4' C1' H1' 110.7 108.9
O3' C3' C2' 112.7 110.3
O3' C3' H3' 102.2 107.8
C3' O3' HO3' 109.5 106.4
C2' C3' H3' 114.1 114.0
C3' C2' O2' 107.2 112.3
C3' C2' C1' 102.2 102.0
C3' C2' H2' 116.1 110.1
O2' C2' C1' 111.3 112.6
O2' C2' H2' 107.7 108.6
C2' O2' HO2' 109.5 107.1
C1' C2' H2' 112.3 111.1
C2' C1' N1 108.2 112.5
C2' C1' H1' 112.4 112.6
N1 C1' H1' 109.0 107.3
C1' N1 C2 117.2 122.0
C1' N1 C6 122.0 118.7
C2 N1 C6 120.8 119.3
N1 C2 O2 120.2 120.9
N1 C2 N3 117.8 118.9
N1 C6 C5 122.3 122.7
N1 C6 H6 118.9 116.1
O2 C2 N3 122.0 120.2
C2 N3 C4 121.9 121.0
N3 C4 N4 118.7 122.3
N3 C4 C5 119.6 121.7
N4 C4 C5 121.8 116.0
C4 N4 C7 126.1 123.7
C4 N4 H4 116.9 118.2
C4 C5 C6 117.8 116.4
C4 C5 H5 121.1 120.7
C7 N4 H4 116.9 118.1
N4 C7 O7 123.8 126.0
N4 C7 CM7 118.5 112.4
C6 C5 H5 121.1 122.9
C5 C6 H6 118.9 121.2
O7 C7 CM7 117.7 121.5
C7 CM7 HM71 109.5 109.5
C7 CM7 HM72 109.5 109.2
C7 CM7 HM73 109.5 111.1
HM71 CM7 HM72 109.4 109.4
HM71 CM7 HM73 109.5 108.3
HM72 CM7 HM73 109.5 109.3

Torsion Angles for 4AC

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
OP1 P OP3 OP2   126.2
OP1 P OP3 O5'   233.4
OP2 P OP3 O5'   107.1
OP3 P OP2 HOP2   78.5
OP3 P O5' C5'   53.2
HOP3 OP3 P OP1   48.7
HOP3 OP3 P OP2   282.5
HOP3 OP3 P O5'   175.4
OP1 P OP3 HOP3   48.7
OP3 P OP1 OP2   240.0
OP3 P OP1 O5'   120.7
OP2 P OP1 O5' 128.2 240.7
OP1 P OP2 HOP2 204.0 312.0
OP1 P O5' C5' 112.2 180.1
OP2 P OP3 HOP3   282.5
OP3 P OP2 OP1   126.5
OP3 P OP2 O5'   252.3
OP1 P OP2 O5' 230.1 125.8
OP2 P O5' C5' 343.9 305.8
O5' P OP3 HOP3   175.4
OP3 P O5' OP1   233.1
OP3 P O5' OP2   107.4
OP1 P O5' OP2 128.3 234.2
O5' P OP2 HOP2 333.9 186.2
P O5' C5' C4' 235.2 180.0
P O5' C5' H5' 114.3 300.1
P O5' C5' H5'' 355.2 59.9
HOP2 OP2 P O5' 333.9 186.2
C4' C5' O5' H5' 120.9 239.9
C4' C5' O5' H5'' 240.0 120.1
O5' C5' C4' O4' 324.5 62.4
O5' C5' C4' C3' 83.3 179.5
O5' C5' C4' H4' 202.3 305.4
H5' C5' O5' H5'' 119.1 240.2
O5' C5' C4' H5' 239.1 119.5
O5' C5' C4' H5'' 120.0 240.4
H5' C5' C4' H5'' 240.9 120.9
O4' C4' C5' C3' 241.2 242.9
O4' C4' C5' H4' 122.3 117.0
C5' C4' O4' C1' 146.9 109.0
C3' C4' C5' H4' 241.0 234.1
C5' C4' C3' O3' 80.8 156.8
C5' C4' C3' C2' 202.1 273.1
C5' C4' C3' H3' 324.9 36.8
O5' C5' H5' C4' 118.8 240.8
O5' C5' H5' H5'' 239.4 119.6
C4' C5' H5' H5'' 120.6 238.8
H5' C5' C4' O4' 85.4 302.9
H5' C5' C4' C3' 204.2 60.0
H5' C5' C4' H4' 323.2 185.9
O5' C5' H5'' C4' 241.9 119.2
O5' C5' H5'' H5' 120.9 240.4
C4' C5' H5'' H5' 239.0 121.2
H5'' C5' C4' O4' 204.6 182.0
H5'' C5' C4' C3' 323.3 299.1
H5'' C5' C4' H4' 82.3 65.0
O4' C4' C5' H5' 85.4 302.9
O4' C4' C5' H5'' 204.6 182.0
C5' C4' O4' C3' 124.7 121.7
C5' C4' O4' H4' 244.0 241.9
C3' C4' O4' H4' 119.3 120.2
O4' C4' C3' O3' 202.5 275.3
O4' C4' C3' C2' 323.8 31.5
O4' C4' C3' H3' 86.6 155.2
C4' O4' C1' C2' 1.3 348.7
C4' O4' C1' N1 244.2 227.1
C4' O4' C1' H1' 123.7 110.3
C3' C4' C5' H5' 204.2 60.0
C3' C4' C5' H5'' 323.3 299.1
C5' C4' C3' O4' 238.3 241.6
C5' C4' C3' H4' 115.9 124.4
O4' C4' C3' H4' 237.6 242.8
C3' C4' O4' C1' 22.1 347.2
O3' C3' C4' C2' 238.7 243.7
O3' C3' C4' H3' 115.9 120.1
C4' C3' O3' HO3' 33.3 15.2
C2' C3' C4' H3' 237.2 236.3
C4' C3' C2' O2' 278.7 202.0
C4' C3' C2' C1' 35.8 322.9
C4' C3' C2' H2' 158.3 80.9
H4' C4' C5' H5' 323.2 185.9
H4' C4' C5' H5'' 82.3 65.0
C5' C4' H4' O4' 119.9 117.3
C5' C4' H4' C3' 236.9 233.5
O4' C4' H4' C3' 117.0 116.2
H4' C4' O4' C1' 262.9 227.0
H4' C4' C3' O3' 324.9 32.5
H4' C4' C3' C2' 86.3 148.7
H4' C4' C3' H3' 209.0 272.4
C1' O4' C4' C3' 22.1 347.2
C1' O4' C4' H4' 262.9 227.0
C3' C2' C1' O4' 336.2 30.7
O2' C2' C1' O4' 90.3 151.3
O4' C1' C2' H2' 211.1 273.4
C2' C1' O4' N1 117.1 121.6
C2' C1' O4' H1' 237.6 238.4
N1 C1' O4' H1' 120.5 116.8
O4' C1' N1 C2 199.7 212.2
O4' C1' N1 C6 21.6 32.3
O3' C3' C4' H4' 324.9 32.5
C4' C3' O3' C2' 114.9 110.7
C4' C3' O3' H3' 237.8 235.8
C2' C3' O3' H3' 122.9 125.1
O3' C3' C2' O2' 40.6 316.5
O3' C3' C2' C1' 157.8 77.4
O3' C3' C2' H2' 280.3 195.4
C2' C3' C4' H4' 86.3 148.7
C4' C3' C2' O3' 238.0 245.5
C4' C3' C2' H3' 122.1 124.0
O4' C1' C2' C3' 336.2 30.7
O3' C3' C2' H3' 244.1 238.5
C2' C3' O3' HO3' 278.4 264.4
O2' C2' C3' C1' 242.9 239.2
O2' C2' C3' H2' 120.4 121.1
C3' C2' O2' HO2' 120.7 168.8
C1' C2' C3' H2' 237.5 242.0
C3' C2' C1' N1 94.4 150.0
C3' C2' C1' H1' 214.8 271.5
H3' C3' C4' H4' 209.0 272.4
C4' C3' H3' O3' 122.5 120.1
C4' C3' H3' C2' 244.5 243.0
O3' C3' H3' C2' 121.9 122.8
H3' C3' O3' HO3' 155.5 139.4
H3' C3' C2' O2' 156.5 78.0
H3' C3' C2' C1' 273.7 198.9
H3' C3' C2' H2' 36.2 316.9
HO3' O3' C3' C2' 278.4 264.4
HO3' O3' C3' H3' 155.5 139.4
O4' C1' C2' O2' 90.3 151.3
O2' C2' C3' H3' 156.5 78.0
C3' C2' O2' C1' 111.0 114.5
C3' C2' O2' H2' 234.4 238.0
C1' C2' O2' H2' 123.4 123.5
O2' C2' C1' N1 208.6 270.6
O2' C2' C1' H1' 329.0 32.1
O4' C1' C2' N1 241.7 240.7
O4' C1' C2' H1' 121.3 119.3
C1' C2' C3' H3' 273.7 198.9
C3' C2' C1' O2' 245.9 239.4
C3' C2' C1' H2' 125.1 117.3
O2' C2' C1' H2' 239.2 237.9
C1' C2' O2' HO2' 9.8 54.3
N1 C1' C2' H1' 239.6 238.6
C2' C1' N1 C2 83.8 94.4
C2' C1' N1 C6 265.7 274.4
H2' C2' C3' H3' 36.2 316.9
C3' C2' H2' O2' 120.1 123.3
C3' C2' H2' C1' 243.0 247.7
O2' C2' H2' C1' 122.9 124.4
H2' C2' O2' HO2' 246.3 290.8
H2' C2' C1' N1 329.4 32.7
H2' C2' C1' H1' 89.8 154.2
HO2' O2' C2' C1' 9.8 54.3
HO2' O2' C2' H2' 246.3 290.8
O4' C1' N1 C2' 116.0 117.9
O4' C1' N1 H1' 238.5 242.3
N1 C1' C2' H2' 329.4 32.7
C2' C1' N1 H1' 122.5 124.4
C2 N1 C1' C6 178.1 180.0
C1' N1 C2 O2 1.4 0.0
C1' N1 C2 N3 180.9 180.0
C1' N1 C6 C5 179.1 180.0
C1' N1 C6 H6 359.1 360.0
O4' C1' H1' C2' 241.1 242.1
O4' C1' H1' N1 121.1 117.8
H1' C1' C2' H2' 89.8 154.2
C2' C1' H1' N1 240.0 235.7
H1' C1' N1 C2 321.2 330.0
H1' C1' N1 C6 143.1 150.0
C2 N1 C1' H1' 321.2 330.0
C1' N1 C2 C6 181.9 180.0
C2 N1 C6 C5 1.1 0.0
C2 N1 C6 H6 181.1 180.0
O2 C2 N1 N3 180.6 180.0
N1 C2 N3 C4 0.6 0.0
C6 N1 C1' H1' 143.1 150.0
C1' N1 C6 C2 178.0 180.0
C6 N1 C2 O2 179.6 180.0
C6 N1 C2 N3 359.0 360.0
C4 C5 C6 N1 359.3 0.0
N1 C6 C5 H5 179.4 180.0
C5 C6 N1 H6 180.0 180.0
O2 C2 N1 C6 179.6 180.0
N1 C2 O2 N3 179.4 180.0
O2 C2 N3 C4 180.0 180.0
N3 C2 N1 C6 359.0 360.0
N1 C2 N3 O2 180.6 180.0
C2 N3 C4 N4 180.7 180.0
C2 N3 C4 C5 359.8 0.0
N4 C4 N3 C5 180.9 180.0
N3 C4 N4 C7 181.1 359.9
N3 C4 N4 H4 1.1 180.0
N3 C4 C5 C6 0.2 360.0
N3 C4 C5 H5 180.2 180.0
N3 C4 N4 C5 179.1 180.0
N4 C4 C5 C6 179.3 180.0
N4 C4 C5 H5 359.3 0.0
C7 N4 C4 H4 180.0 179.9
C4 N4 C7 O7 357.5 0.1
C4 N4 C7 CM7 176.6 181.5
N1 C6 C5 C4 359.3 0.0
N3 C4 C5 N4 180.9 180.0
C5 C4 N4 C7 2.0 179.9
C5 C4 N4 H4 182.0 0.0
C6 C5 C4 H5 180.0 180.0
C4 C5 C6 H6 179.4 180.0
C7 N4 C4 C5 2.0 179.9
C4 N4 C7 H4 180.0 180.1
O7 C7 N4 CM7 180.9 178.6
N4 C7 CM7 HM71 137.3 205.0
N4 C7 CM7 HM72 17.3 85.3
N4 C7 CM7 HM73 257.3 324.6
H4 N4 C4 C5 182.0 0.0
C4 N4 H4 C7 180.0 179.9
H4 N4 C7 O7 177.6 180.0
H4 N4 C7 CM7 356.7 1.4
N1 C6 C5 H6 180.0 180.0
C4 C5 C6 H5 180.0 180.0
C4 C5 H5 C6 180.0 180.0
H5 C5 C6 H6 359.4 360.0
N1 C6 H6 C5 180.0 180.0
H6 C6 C5 H5 359.4 360.0
O7 C7 N4 H4 177.6 180.0
N4 C7 O7 CM7 179.1 181.5
O7 C7 CM7 HM71 316.4 26.3
O7 C7 CM7 HM72 196.5 266.6
O7 C7 CM7 HM73 76.5 145.9
CM7 C7 N4 H4 356.7 1.4
N4 C7 CM7 O7 180.8 178.7
HM71 CM7 C7 HM72 119.9 119.7
HM71 CM7 C7 HM73 240.0 240.4
HM72 CM7 C7 HM73 120.0 120.6
C7 CM7 HM71 HM72 240.0 240.4
C7 CM7 HM71 HM73 120.1 121.3
HM72 CM7 HM71 HM73 240.0 241.0
C7 CM7 HM72 HM71 120.0 119.8
C7 CM7 HM72 HM73 239.9 238.3
HM71 CM7 HM72 HM73 120.0 118.4
C7 CM7 HM73 HM71 240.0 239.7
C7 CM7 HM73 HM72 120.0 120.6
HM71 CM7 HM73 HM72 240.1 240.9