PDB Chemical Component 4AB
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 4AB
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N1 |
C2 |
1.333 |
1.324 |
| N1 |
C8A |
1.332 |
1.330 |
| C2 |
N2 |
1.319 |
1.386 |
| C2 |
N3 |
1.325 |
1.323 |
| N2 |
H22 |
1.020 |
0.970 |
| N2 |
H21 |
1.020 |
0.970 |
| N3 |
C4 |
1.327 |
1.330 |
| C4 |
NH4 |
1.313 |
1.389 |
| C4 |
C4A |
1.396 |
1.400 |
| NH4 |
HH41 |
1.020 |
0.970 |
| NH4 |
HH42 |
1.020 |
0.969 |
| C4A |
C8A |
1.397 |
1.388 |
| C4A |
N5 |
1.336 |
1.400 |
| C8A |
N8 |
1.335 |
1.394 |
| N5 |
C6 |
1.456 |
1.462 |
| N5 |
H5 |
1.020 |
1.008 |
| N8 |
C7 |
1.414 |
1.473 |
| N8 |
H8 |
1.020 |
0.971 |
| C6 |
C7 |
1.449 |
1.534 |
| C6 |
C9 |
1.517 |
1.529 |
| C6 |
H6 |
1.115 |
1.090 |
| C7 |
H71 |
1.114 |
1.090 |
| C7 |
H72 |
1.115 |
1.090 |
| C9 |
O9 |
1.436 |
1.429 |
| C9 |
C10 |
1.538 |
1.530 |
| C9 |
H9 |
1.116 |
1.089 |
| O9 |
H9O1 |
0.951 |
0.966 |
| C10 |
C11 |
1.527 |
1.530 |
| C10 |
O10 |
1.432 |
1.429 |
| C10 |
H10 |
1.114 |
1.090 |
| C11 |
H113 |
1.115 |
1.089 |
| C11 |
H112 |
1.116 |
1.090 |
| C11 |
H111 |
1.115 |
1.089 |
| O10 |
H1O1 |
0.949 |
0.966 |
Bond Angles for 4AB
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
N1 |
C8A |
120.8 |
120.7 |
| N1 |
C2 |
N2 |
118.7 |
119.2 |
| N1 |
C2 |
N3 |
121.9 |
121.6 |
| N1 |
C8A |
C4A |
119.4 |
119.7 |
| N1 |
C8A |
N8 |
120.3 |
119.8 |
| N2 |
C2 |
N3 |
119.4 |
119.2 |
| C2 |
N2 |
H22 |
118.7 |
120.0 |
| C2 |
N2 |
H21 |
108.9 |
120.0 |
| C2 |
N3 |
C4 |
119.9 |
121.0 |
| H22 |
N2 |
H21 |
108.9 |
120.0 |
| N3 |
C4 |
NH4 |
119.2 |
120.5 |
| N3 |
C4 |
C4A |
120.7 |
119.1 |
| NH4 |
C4 |
C4A |
120.1 |
120.4 |
| C4 |
NH4 |
HH41 |
119.2 |
119.9 |
| C4 |
NH4 |
HH42 |
108.8 |
120.0 |
| C4 |
C4A |
C8A |
117.3 |
117.9 |
| C4 |
C4A |
N5 |
120.8 |
119.0 |
| HH41 |
NH4 |
HH42 |
108.7 |
120.0 |
| C8A |
C4A |
N5 |
121.9 |
123.1 |
| C4A |
C8A |
N8 |
120.4 |
120.5 |
| C4A |
N5 |
C6 |
118.4 |
109.7 |
| C4A |
N5 |
H5 |
109.0 |
106.7 |
| C8A |
N8 |
C7 |
121.1 |
117.1 |
| C8A |
N8 |
H8 |
108.1 |
121.4 |
| C6 |
N5 |
H5 |
109.0 |
106.8 |
| N5 |
C6 |
C7 |
115.9 |
109.5 |
| N5 |
C6 |
C9 |
113.3 |
109.5 |
| N5 |
C6 |
H6 |
113.1 |
109.5 |
| C7 |
N8 |
H8 |
108.1 |
121.5 |
| N8 |
C7 |
C6 |
115.2 |
106.9 |
| N8 |
C7 |
H71 |
110.1 |
110.0 |
| N8 |
C7 |
H72 |
110.1 |
109.9 |
| C7 |
C6 |
C9 |
125.2 |
109.5 |
| C7 |
C6 |
H6 |
88.3 |
109.5 |
| C6 |
C7 |
H71 |
110.1 |
110.0 |
| C6 |
C7 |
H72 |
110.1 |
109.9 |
| C9 |
C6 |
H6 |
93.8 |
109.4 |
| C6 |
C9 |
O9 |
110.0 |
109.5 |
| C6 |
C9 |
C10 |
111.5 |
109.5 |
| C6 |
C9 |
H9 |
107.8 |
109.5 |
| H71 |
C7 |
H72 |
100.2 |
110.0 |
| O9 |
C9 |
C10 |
109.7 |
109.4 |
| O9 |
C9 |
H9 |
109.6 |
109.5 |
| C9 |
O9 |
H9O1 |
110.0 |
106.8 |
| C10 |
C9 |
H9 |
108.1 |
109.5 |
| C9 |
C10 |
C11 |
111.5 |
109.5 |
| C9 |
C10 |
O10 |
109.5 |
109.4 |
| C9 |
C10 |
H10 |
108.2 |
109.5 |
| C11 |
C10 |
O10 |
110.0 |
109.5 |
| C11 |
C10 |
H10 |
107.7 |
109.5 |
| C10 |
C11 |
H113 |
111.6 |
109.5 |
| C10 |
C11 |
H112 |
111.4 |
109.4 |
| C10 |
C11 |
H111 |
111.4 |
109.5 |
| O10 |
C10 |
H10 |
109.8 |
109.5 |
| C10 |
O10 |
H1O1 |
109.5 |
106.9 |
| H113 |
C11 |
H112 |
111.4 |
109.5 |
| H113 |
C11 |
H111 |
111.5 |
109.5 |
| H112 |
C11 |
H111 |
98.9 |
109.5 |
Torsion Angles for 4AB
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
N1 |
C8A |
C4A |
356.6 |
0.3 |
| C2 |
N1 |
C8A |
N8 |
177.0 |
180.3 |
| N2 |
C2 |
N1 |
N3 |
178.9 |
180.0 |
| N1 |
C2 |
N2 |
H22 |
180.0 |
180.1 |
| N1 |
C2 |
N2 |
H21 |
54.7 |
360.0 |
| N1 |
C2 |
N3 |
C4 |
360.0 |
359.8 |
| C8A |
N1 |
C2 |
N2 |
180.8 |
180.0 |
| C8A |
N1 |
C2 |
N3 |
1.9 |
0.1 |
| C4 |
C4A |
C8A |
N1 |
3.2 |
359.5 |
| N1 |
C8A |
C4A |
N5 |
183.3 |
179.0 |
| C4A |
C8A |
N1 |
N8 |
179.5 |
180.0 |
| N1 |
C8A |
N8 |
C7 |
186.0 |
189.2 |
| N1 |
C8A |
N8 |
H8 |
60.8 |
9.3 |
| N2 |
C2 |
N1 |
C8A |
180.8 |
180.0 |
| N1 |
C2 |
N2 |
N3 |
181.0 |
180.0 |
| N2 |
C2 |
N3 |
C4 |
181.0 |
179.8 |
| H22 |
N2 |
C2 |
H21 |
125.3 |
180.1 |
| N3 |
C2 |
N1 |
C8A |
1.9 |
0.1 |
| N1 |
C2 |
N3 |
N2 |
178.9 |
180.0 |
| N3 |
C2 |
N2 |
H22 |
359.0 |
0.1 |
| N3 |
C2 |
N2 |
H21 |
233.7 |
179.9 |
| C2 |
N3 |
C4 |
NH4 |
179.5 |
180.0 |
| C2 |
N3 |
C4 |
C4A |
359.9 |
0.0 |
| H22 |
N2 |
C2 |
N3 |
359.0 |
0.1 |
| C2 |
N2 |
H22 |
H21 |
234.7 |
179.9 |
| H21 |
N2 |
C2 |
N3 |
233.7 |
179.9 |
| C2 |
N2 |
H21 |
H22 |
130.8 |
180.1 |
| NH4 |
C4 |
N3 |
C4A |
179.6 |
180.0 |
| N3 |
C4 |
NH4 |
HH41 |
180.0 |
360.0 |
| N3 |
C4 |
NH4 |
HH42 |
54.7 |
180.0 |
| N3 |
C4 |
C4A |
C8A |
358.6 |
0.3 |
| N3 |
C4 |
C4A |
N5 |
178.4 |
180.8 |
| N3 |
C4 |
NH4 |
C4A |
180.4 |
180.0 |
| NH4 |
C4 |
C4A |
C8A |
179.0 |
180.3 |
| NH4 |
C4 |
C4A |
N5 |
358.8 |
0.8 |
| HH41 |
NH4 |
C4 |
HH42 |
125.4 |
180.0 |
| N1 |
C8A |
C4A |
C4 |
3.2 |
359.5 |
| N3 |
C4 |
C4A |
NH4 |
179.6 |
180.0 |
| C4A |
C4 |
NH4 |
HH41 |
359.7 |
180.0 |
| C4A |
C4 |
NH4 |
HH42 |
234.3 |
0.0 |
| C8A |
C4A |
C4 |
N5 |
180.2 |
179.5 |
| C4 |
C4A |
C8A |
N8 |
182.7 |
179.5 |
| C4 |
C4A |
N5 |
C6 |
186.5 |
205.3 |
| C4 |
C4A |
N5 |
H5 |
61.2 |
320.6 |
| HH41 |
NH4 |
C4 |
C4A |
359.7 |
180.0 |
| C4 |
NH4 |
HH41 |
HH42 |
234.6 |
180.0 |
| HH42 |
NH4 |
C4 |
C4A |
234.3 |
0.0 |
| C4 |
NH4 |
HH42 |
HH41 |
131.3 |
180.0 |
| N1 |
C8A |
C4A |
N8 |
180.5 |
180.0 |
| C4 |
C4A |
C8A |
N5 |
179.8 |
180.5 |
| C8A |
C4A |
N5 |
C6 |
6.3 |
25.8 |
| C8A |
C4A |
N5 |
H5 |
241.0 |
141.2 |
| C4A |
C8A |
N8 |
C7 |
6.5 |
9.2 |
| C4A |
C8A |
N8 |
H8 |
241.3 |
189.3 |
| C4 |
C4A |
N5 |
C8A |
180.2 |
179.5 |
| N5 |
C4A |
C8A |
N8 |
2.9 |
359.0 |
| C6 |
N5 |
C4A |
H5 |
125.3 |
244.7 |
| C4A |
N5 |
C6 |
C7 |
336.3 |
303.0 |
| C4A |
N5 |
C6 |
C9 |
181.4 |
183.0 |
| C4A |
N5 |
C6 |
H6 |
76.2 |
63.0 |
| N1 |
C8A |
N8 |
C4A |
179.5 |
180.0 |
| N8 |
C8A |
C4A |
N5 |
2.9 |
359.0 |
| C7 |
N8 |
C8A |
H8 |
125.2 |
179.9 |
| C8A |
N8 |
C7 |
C6 |
336.1 |
320.8 |
| C8A |
N8 |
C7 |
H71 |
101.3 |
201.4 |
| C8A |
N8 |
C7 |
H72 |
210.9 |
80.1 |
| C4A |
N5 |
C6 |
H5 |
234.7 |
115.3 |
| N8 |
C7 |
C6 |
N5 |
31.7 |
64.1 |
| C7 |
C6 |
N5 |
C9 |
155.0 |
120.0 |
| C7 |
C6 |
N5 |
H6 |
260.1 |
240.0 |
| N5 |
C6 |
C7 |
H71 |
266.4 |
183.4 |
| N5 |
C6 |
C7 |
H72 |
156.9 |
304.8 |
| C9 |
C6 |
N5 |
H6 |
105.2 |
120.0 |
| N5 |
C6 |
C9 |
O9 |
71.9 |
65.2 |
| N5 |
C6 |
C9 |
C10 |
193.9 |
185.2 |
| N5 |
C6 |
C9 |
H9 |
312.4 |
305.2 |
| C4A |
N5 |
H5 |
C6 |
130.6 |
242.7 |
| H5 |
N5 |
C6 |
C7 |
101.6 |
187.7 |
| H5 |
N5 |
C6 |
C9 |
306.7 |
67.7 |
| H5 |
N5 |
C6 |
H6 |
201.5 |
307.7 |
| C8A |
N8 |
C7 |
H8 |
234.8 |
180.1 |
| N5 |
C6 |
C7 |
N8 |
31.7 |
64.1 |
| N8 |
C7 |
C6 |
C9 |
183.2 |
184.1 |
| N8 |
C7 |
C6 |
H6 |
276.7 |
304.1 |
| C6 |
C7 |
N8 |
H71 |
234.8 |
119.4 |
| C6 |
C7 |
N8 |
H72 |
125.2 |
240.7 |
| H71 |
C7 |
N8 |
H72 |
250.5 |
121.3 |
| C8A |
N8 |
H8 |
C7 |
132.6 |
179.9 |
| H8 |
N8 |
C7 |
C6 |
101.3 |
140.7 |
| H8 |
N8 |
C7 |
H71 |
226.6 |
21.3 |
| H8 |
N8 |
C7 |
H72 |
336.1 |
260.0 |
| C7 |
C6 |
N5 |
H5 |
101.6 |
187.7 |
| N5 |
C6 |
C7 |
C9 |
208.4 |
239.9 |
| N5 |
C6 |
C7 |
H6 |
115.0 |
120.0 |
| C6 |
C7 |
N8 |
H8 |
101.3 |
140.7 |
| N8 |
C7 |
C6 |
H71 |
125.2 |
240.7 |
| N8 |
C7 |
C6 |
H72 |
234.8 |
119.3 |
| C9 |
C6 |
C7 |
H6 |
266.5 |
240.1 |
| C7 |
C6 |
C9 |
O9 |
279.7 |
305.2 |
| C7 |
C6 |
C9 |
C10 |
41.6 |
65.2 |
| C7 |
C6 |
C9 |
H9 |
160.2 |
185.2 |
| H71 |
C7 |
C6 |
H72 |
109.5 |
238.6 |
| C9 |
C6 |
N5 |
H5 |
306.7 |
67.7 |
| N5 |
C6 |
C9 |
C7 |
152.2 |
120.0 |
| N5 |
C6 |
C9 |
H6 |
242.8 |
240.0 |
| C7 |
C6 |
C9 |
H6 |
90.6 |
120.0 |
| C9 |
C6 |
C7 |
H71 |
58.0 |
303.5 |
| C9 |
C6 |
C7 |
H72 |
308.5 |
64.8 |
| O9 |
C9 |
C6 |
C10 |
238.0 |
240.0 |
| O9 |
C9 |
C6 |
H9 |
119.5 |
120.0 |
| C6 |
C9 |
O9 |
H9O1 |
180.0 |
60.0 |
| C10 |
C9 |
C6 |
H9 |
241.5 |
240.0 |
| C6 |
C9 |
C10 |
C11 |
182.8 |
175.2 |
| C6 |
C9 |
C10 |
O10 |
60.8 |
55.2 |
| C6 |
C9 |
C10 |
H10 |
301.1 |
295.2 |
| H6 |
C6 |
N5 |
H5 |
201.5 |
307.7 |
| N5 |
C6 |
H6 |
C7 |
242.5 |
240.0 |
| N5 |
C6 |
H6 |
C9 |
117.3 |
120.1 |
| C7 |
C6 |
H6 |
C9 |
234.8 |
240.0 |
| H6 |
C6 |
C7 |
H71 |
151.5 |
63.4 |
| H6 |
C6 |
C7 |
H72 |
41.9 |
184.8 |
| H6 |
C6 |
C9 |
O9 |
189.1 |
185.2 |
| H6 |
C6 |
C9 |
C10 |
311.0 |
305.2 |
| H6 |
C6 |
C9 |
H9 |
69.6 |
65.3 |
| H71 |
C7 |
N8 |
H8 |
226.6 |
21.3 |
| N8 |
C7 |
H71 |
C6 |
231.9 |
117.4 |
| N8 |
C7 |
H71 |
H72 |
115.9 |
238.8 |
| H71 |
C7 |
C6 |
C9 |
58.0 |
303.5 |
| H71 |
C7 |
C6 |
H6 |
151.5 |
63.4 |
| C6 |
C7 |
H71 |
H72 |
244.1 |
121.3 |
| H72 |
C7 |
N8 |
H8 |
336.1 |
260.0 |
| N8 |
C7 |
H72 |
C6 |
128.1 |
242.6 |
| N8 |
C7 |
H72 |
H71 |
244.1 |
121.3 |
| H72 |
C7 |
C6 |
C9 |
308.5 |
64.8 |
| H72 |
C7 |
C6 |
H6 |
41.9 |
184.8 |
| C6 |
C7 |
H72 |
H71 |
115.9 |
238.6 |
| O9 |
C9 |
C6 |
H6 |
189.1 |
185.2 |
| C6 |
C9 |
O9 |
C10 |
123.0 |
120.1 |
| C6 |
C9 |
O9 |
H9 |
241.6 |
240.0 |
| C10 |
C9 |
O9 |
H9 |
118.6 |
120.0 |
| O9 |
C9 |
C10 |
C11 |
304.9 |
295.2 |
| O9 |
C9 |
C10 |
O10 |
182.9 |
175.2 |
| O9 |
C9 |
C10 |
H10 |
63.2 |
55.2 |
| C10 |
C9 |
C6 |
H6 |
311.0 |
305.2 |
| C6 |
C9 |
C10 |
O9 |
237.9 |
240.0 |
| C6 |
C9 |
C10 |
H9 |
118.3 |
120.0 |
| O9 |
C9 |
C10 |
H9 |
240.5 |
240.0 |
| C10 |
C9 |
O9 |
H9O1 |
57.1 |
299.9 |
| C11 |
C10 |
C9 |
O10 |
122.0 |
120.0 |
| C11 |
C10 |
C9 |
H10 |
241.7 |
239.9 |
| C9 |
C10 |
C11 |
H113 |
180.0 |
180.0 |
| C9 |
C10 |
C11 |
H112 |
305.3 |
300.0 |
| C9 |
C10 |
C11 |
H111 |
54.7 |
60.0 |
| O10 |
C10 |
C9 |
H10 |
119.7 |
120.0 |
| C9 |
C10 |
O10 |
H1O1 |
180.0 |
60.0 |
| H9 |
C9 |
C6 |
H6 |
69.6 |
65.3 |
| C6 |
C9 |
H9 |
O9 |
119.8 |
120.0 |
| C6 |
C9 |
H9 |
C10 |
239.3 |
239.9 |
| O9 |
C9 |
H9 |
C10 |
119.6 |
119.9 |
| H9 |
C9 |
O9 |
H9O1 |
298.5 |
180.0 |
| H9 |
C9 |
C10 |
C11 |
64.5 |
55.1 |
| H9 |
C9 |
C10 |
O10 |
302.4 |
295.2 |
| H9 |
C9 |
C10 |
H10 |
182.8 |
175.2 |
| H9O1 |
O9 |
C9 |
C10 |
57.1 |
299.9 |
| H9O1 |
O9 |
C9 |
H9 |
298.5 |
180.0 |
| C11 |
C10 |
C9 |
H9 |
64.5 |
55.1 |
| C9 |
C10 |
C11 |
O10 |
238.3 |
240.0 |
| C9 |
C10 |
C11 |
H10 |
118.6 |
120.0 |
| O10 |
C10 |
C11 |
H10 |
240.3 |
240.0 |
| C11 |
C10 |
O10 |
H1O1 |
57.1 |
300.0 |
| H113 |
C11 |
C10 |
H112 |
234.7 |
240.0 |
| H113 |
C11 |
C10 |
H111 |
125.4 |
120.0 |
| H112 |
C11 |
C10 |
H111 |
250.6 |
240.1 |
| O10 |
C10 |
C9 |
H9 |
302.4 |
295.2 |
| C9 |
C10 |
O10 |
C11 |
122.9 |
120.0 |
| C9 |
C10 |
O10 |
H10 |
241.3 |
240.0 |
| C11 |
C10 |
O10 |
H10 |
118.4 |
120.0 |
| O10 |
C10 |
C11 |
H113 |
301.7 |
300.0 |
| O10 |
C10 |
C11 |
H112 |
67.0 |
60.0 |
| O10 |
C10 |
C11 |
H111 |
176.4 |
180.0 |
| H10 |
C10 |
C9 |
H9 |
182.8 |
175.2 |
| C9 |
C10 |
H10 |
C11 |
239.3 |
239.9 |
| C9 |
C10 |
H10 |
O10 |
119.5 |
119.9 |
| C11 |
C10 |
H10 |
O10 |
240.2 |
240.0 |
| H10 |
C10 |
C11 |
H113 |
61.4 |
60.0 |
| H10 |
C10 |
C11 |
H112 |
186.7 |
180.0 |
| H10 |
C10 |
C11 |
H111 |
296.0 |
300.0 |
| H10 |
C10 |
O10 |
H1O1 |
298.7 |
180.0 |
| H113 |
C11 |
C10 |
O10 |
301.7 |
300.0 |
| H113 |
C11 |
C10 |
H10 |
61.4 |
60.0 |
| C10 |
C11 |
H113 |
H112 |
125.3 |
120.0 |
| C10 |
C11 |
H113 |
H111 |
234.7 |
240.0 |
| H112 |
C11 |
H113 |
H111 |
109.4 |
120.0 |
| H112 |
C11 |
C10 |
O10 |
67.0 |
60.0 |
| H112 |
C11 |
C10 |
H10 |
186.7 |
180.0 |
| C10 |
C11 |
H112 |
H113 |
234.7 |
240.0 |
| C10 |
C11 |
H112 |
H111 |
117.3 |
119.9 |
| H113 |
C11 |
H112 |
H111 |
242.6 |
240.0 |
| H111 |
C11 |
C10 |
O10 |
176.4 |
180.0 |
| H111 |
C11 |
C10 |
H10 |
296.0 |
300.0 |
| C10 |
C11 |
H111 |
H113 |
125.4 |
120.0 |
| C10 |
C11 |
H111 |
H112 |
242.7 |
240.1 |
| H113 |
C11 |
H111 |
H112 |
117.3 |
120.0 |
| H1O1 |
O10 |
C10 |
H10 |
298.7 |
180.0 |