PDB Chemical Component 497

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 497

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C47 C45 1.521 1.530
C47 H471 1.114 1.090
C47 H472 1.116 1.090
C47 H473 1.114 1.090
C45 C39 1.519 1.530
C45 H451 1.115 1.090
C45 H452 1.115 1.091
C39 C38 1.535 1.529
C39 C27 1.510 1.508
C39 H39 1.114 1.091
C38 N37 1.469 1.469
C38 H381 1.115 1.090
C38 H382 1.116 1.089
N37 C36 1.472 1.464
N37 H37 1.021 1.009
C36 C26 1.519 1.506
C36 H361 1.115 1.090
C36 H362 1.116 1.089
C26 C27 1.426 1.380
C26 C25 1.408 1.387
C27 C28 1.411 1.384
C28 C22 1.414 1.387
C28 H28 1.103 1.080
C22 N21 1.370 1.399
C22 C24 1.401 1.389
N21 C20 1.337 1.347
N21 H21 1.021 0.970
C20 O23 1.209 1.216
C20 C11 1.495 1.476
C11 C12 1.423 1.405
C11 C10 1.423 1.385
C12 C13 1.406 1.358
C12 H12 1.102 1.080
C13 C4 1.416 1.408
C13 H13 1.102 1.080
C4 C5 1.410 1.403
C4 C3 1.424 1.418
C5 C6 1.413 1.384
C5 H5 1.102 1.080
C6 C1 1.415 1.404
C6 C17 1.479 1.481
C1 C2 1.407 1.358
C1 H1 1.103 1.080
C2 C3 1.415 1.407
C2 H2 1.103 1.080
C3 C10 1.425 1.403
C10 H10 1.104 1.079
C17 N18 1.320 1.377
C17 N19 1.309 1.303
N18 H181 1.020 0.970
N18 H182 1.020 0.970
N19 H19 1.020 0.970
C24 C25 1.394 1.380
C24 H24 1.103 1.080
C25 H25 1.103 1.080

Bond Angles for 497

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C45 C47 H471 110.2 109.4
C45 C47 H472 111.9 109.5
C45 C47 H473 111.9 109.5
C47 C45 C39 110.2 109.5
C47 C45 H451 112.0 109.5
C47 C45 H452 112.0 109.5
H471 C47 H472 111.9 109.5
H471 C47 H473 112.0 109.5
H472 C47 H473 98.5 109.5
C39 C45 H451 111.9 109.4
C39 C45 H452 111.9 109.5
C45 C39 C38 120.2 109.5
C45 C39 C27 120.8 109.5
C45 C39 H39 88.1 109.4
H451 C45 H452 98.5 109.4
C38 C39 C27 113.3 109.5
C38 C39 H39 103.8 109.5
C39 C38 N37 108.0 108.8
C39 C38 H381 112.8 109.6
C39 C38 H382 112.8 109.5
C27 C39 H39 102.6 109.5
C39 C27 C26 116.9 120.9
C39 C27 C28 123.8 119.0
N37 C38 H381 112.7 109.6
N37 C38 H382 112.7 109.6
C38 N37 C36 118.1 106.6
C38 N37 H37 109.1 106.7
H381 C38 H382 97.7 109.7
C36 N37 H37 109.1 106.7
N37 C36 C26 114.9 110.8
N37 C36 H361 110.3 109.2
N37 C36 H362 110.2 109.3
C26 C36 H361 110.2 109.2
C26 C36 H362 110.2 109.2
C36 C26 C27 121.4 121.4
C36 C26 C25 118.6 118.7
H361 C36 H362 100.0 109.1
C27 C26 C25 120.0 119.8
C26 C27 C28 119.3 120.1
C26 C25 C24 118.4 120.4
C26 C25 H25 121.3 119.8
C27 C28 C22 119.4 120.2
C27 C28 H28 120.2 119.9
C22 C28 H28 120.4 119.9
C28 C22 N21 124.5 120.2
C28 C22 C24 119.1 119.7
N21 C22 C24 116.4 120.1
C22 N21 C20 123.5 120.0
C22 N21 H21 119.5 120.0
C22 C24 C25 122.2 119.8
C22 C24 H24 119.2 120.1
C20 N21 H21 117.0 120.0
N21 C20 O23 118.2 120.0
N21 C20 C11 119.3 120.0
O23 C20 C11 122.5 120.0
C20 C11 C12 117.9 119.7
C20 C11 C10 123.9 119.7
C12 C11 C10 118.2 120.5
C11 C12 C13 121.5 120.8
C11 C12 H12 119.8 119.6
C11 C10 C3 120.7 119.5
C11 C10 H10 119.6 120.2
C13 C12 H12 118.7 119.6
C12 C13 C4 120.3 120.0
C12 C13 H13 119.6 120.0
C4 C13 H13 120.2 120.0
C13 C4 C5 120.9 120.9
C13 C4 C3 119.3 119.7
C5 C4 C3 119.3 119.4
C4 C5 C6 121.6 119.5
C4 C5 H5 119.1 120.3
C4 C3 C2 118.8 119.6
C4 C3 C10 120.0 119.4
C6 C5 H5 119.3 120.2
C5 C6 C1 118.7 120.5
C5 C6 C17 120.0 119.8
C1 C6 C17 121.3 119.7
C6 C1 C2 119.8 120.8
C6 C1 H1 120.4 119.6
C6 C17 N18 121.1 120.1
C6 C17 N19 122.3 120.0
C2 C1 H1 119.8 119.6
C1 C2 C3 121.4 120.0
C1 C2 H2 119.0 120.0
C3 C2 H2 119.6 120.0
C2 C3 C10 121.1 120.9
C3 C10 H10 119.7 120.3
N18 C17 N19 116.6 120.0
C17 N18 H181 121.1 120.1
C17 N18 H182 108.0 120.0
C17 N19 H19 120.0 120.0
H181 N18 H182 108.1 119.9
C25 C24 H24 118.6 120.1
C24 C25 H25 120.3 119.8

Torsion Angles for 497

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
H471 C47 C45 H472 234.8 240.0
H471 C47 C45 H473 125.3 120.0
H472 C47 C45 H473 250.5 240.0
C39 C45 C47 H451 234.8 240.0
C39 C45 C47 H452 125.3 120.0
C47 C45 C39 C38 53.4 60.0
C47 C45 C39 C27 204.9 180.0
C47 C45 C39 H39 308.4 300.0
H451 C45 C47 H452 250.5 240.0
C45 C47 H471 H472 125.2 120.0
C45 C47 H471 H473 234.7 240.0
H471 C47 C45 C39 180.0 180.0
H471 C47 C45 H451 305.2 300.0
H471 C47 C45 H452 54.8 60.0
H472 C47 H471 H473 109.5 120.0
C45 C47 H472 H471 235.7 240.0
C45 C47 H472 H473 117.8 120.0
H472 C47 C45 C39 305.3 300.0
H472 C47 C45 H451 70.5 60.0
H472 C47 C45 H452 180.0 180.0
H471 C47 H472 H473 242.1 240.0
C45 C47 H473 H471 124.3 120.0
C45 C47 H473 H472 242.2 240.0
H473 C47 C45 C39 54.7 60.1
H473 C47 C45 H451 179.9 180.0
H473 C47 C45 H452 289.4 300.0
H471 C47 H473 H472 117.9 120.0
C39 C45 C47 H471 180.0 180.0
C39 C45 C47 H472 305.3 300.0
C39 C45 C47 H473 54.7 60.1
C47 C45 C39 H451 125.3 120.0
C47 C45 C39 H452 234.7 239.9
H451 C45 C39 H452 109.4 119.9
C38 C39 C45 C27 208.4 240.0
C38 C39 C45 H39 104.9 120.0
C45 C39 C38 N37 209.2 171.9
C45 C39 C38 H381 334.5 291.7
C45 C39 C38 H382 83.9 52.1
C27 C39 C45 H39 256.5 240.0
C45 C39 C27 C26 168.3 224.6
C45 C39 C27 C28 349.7 44.6
H451 C45 C47 H471 305.2 300.0
H451 C45 C47 H472 70.5 60.0
H451 C45 C47 H473 179.9 180.0
C47 C45 H451 C39 235.7 240.0
C47 C45 H451 H452 117.9 120.1
C39 C45 H451 H452 242.2 240.1
H451 C45 C39 C38 288.1 299.9
H451 C45 C39 C27 79.7 60.0
H451 C45 C39 H39 183.2 179.9
H452 C45 C47 H471 54.8 60.0
H452 C45 C47 H472 180.0 180.0
H452 C45 C47 H473 289.4 300.0
C47 C45 H452 C39 124.3 120.0
C47 C45 H452 H451 242.1 239.9
C39 C45 H452 H451 117.8 119.9
H452 C45 C39 C38 178.7 180.0
H452 C45 C39 C27 330.2 300.1
H452 C45 C39 H39 73.7 60.0
C38 C39 C45 H451 288.1 299.9
C38 C39 C45 H452 178.7 180.0
C45 C39 C38 C27 153.6 120.0
C45 C39 C38 H39 264.0 240.0
C27 C39 C38 H39 110.5 120.0
C38 C39 C27 C26 321.6 344.6
C38 C39 C27 C28 143.1 164.7
N37 C38 C39 H381 234.7 240.2
N37 C38 C39 H382 125.2 119.8
C39 C38 N37 C36 306.0 285.4
C39 C38 N37 H37 180.8 171.6
H381 C38 C39 H382 250.5 239.6
C27 C39 C45 H451 79.7 60.0
C27 C39 C45 H452 330.2 300.1
C45 C39 C27 C38 206.6 239.9
C45 C39 C27 H39 95.4 119.9
C38 C39 C27 H39 248.7 240.0
C27 C39 C38 N37 55.6 51.9
C27 C39 C38 H381 180.9 171.7
C27 C39 C38 H382 290.4 292.1
C36 C26 C27 C39 15.9 0.1
C39 C27 C26 C25 195.6 180.1
C26 C27 C39 C28 178.5 180.0
C39 C27 C28 C22 167.8 180.0
C39 C27 C28 H28 347.7 360.0
H39 C39 C45 H451 183.2 179.9
H39 C39 C45 H452 73.7 60.0
C45 C39 H39 C38 120.6 120.0
C45 C39 H39 C27 238.8 240.0
C38 C39 H39 C27 118.2 120.0
H39 C39 C38 N37 305.1 291.9
H39 C39 C38 H381 70.4 51.7
H39 C39 C38 H382 179.9 172.1
H39 C39 C27 C26 72.9 104.6
H39 C39 C27 C28 254.4 284.7
N37 C38 C39 C27 55.6 51.9
N37 C38 C39 H39 305.1 291.9
C39 C38 N37 H381 125.3 119.8
C39 C38 N37 H382 234.7 240.3
H381 C38 N37 H382 109.4 120.5
C36 N37 C38 H37 125.2 113.8
C38 N37 C36 C26 32.5 56.4
C38 N37 C36 H361 157.8 176.7
C38 N37 C36 H362 267.3 296.0
H381 C38 C39 C27 180.9 171.7
H381 C38 C39 H39 70.4 51.7
C39 C38 H381 N37 237.3 240.7
C39 C38 H381 H382 118.7 120.3
N37 C38 H381 H382 241.4 239.6
H381 C38 N37 C36 180.8 165.6
H381 C38 N37 H37 55.5 51.9
H382 C38 C39 C27 290.4 292.1
H382 C38 C39 H39 179.9 172.1
C39 C38 H382 N37 122.6 119.3
C39 C38 H382 H381 241.3 239.7
N37 C38 H382 H381 118.7 120.4
H382 C38 N37 C36 71.3 45.2
H382 C38 N37 H37 306.1 291.4
C36 N37 C38 H381 180.8 165.6
C36 N37 C38 H382 71.3 45.2
C38 N37 C36 H37 234.8 246.2
C26 C36 N37 H361 234.7 239.7
C26 C36 N37 H362 125.2 120.4
N37 C36 C26 C27 348.2 339.3
N37 C36 C26 C25 168.5 159.4
H361 C36 N37 H362 250.6 240.7
H37 N37 C38 H381 55.5 51.9
H37 N37 C38 H382 306.1 291.4
C38 N37 H37 C36 130.3 113.7
H37 N37 C36 C26 157.7 170.2
H37 N37 C36 H361 283.0 290.5
H37 N37 C36 H362 32.5 49.8
C39 C27 C26 C36 15.9 0.1
C26 C36 N37 H37 157.7 170.2
N37 C36 C26 H361 125.3 120.4
N37 C36 C26 H362 234.8 239.6
H361 C36 C26 H362 109.4 119.2
C27 C26 C36 C25 179.7 180.0
C36 C26 C27 C28 194.5 180.0
C36 C26 C25 C24 173.4 179.9
C36 C26 C25 H25 353.5 359.9
H361 C36 N37 H37 283.0 290.5
N37 C36 H361 C26 232.1 238.7
N37 C36 H361 H362 116.0 119.4
C26 C36 H361 H362 244.0 240.7
H361 C36 C26 C27 222.9 219.0
H361 C36 C26 C25 43.2 39.0
H362 C36 N37 H37 32.5 49.8
N37 C36 H362 C26 127.9 121.4
N37 C36 H362 H361 243.9 240.6
C26 C36 H362 H361 116.1 119.3
H362 C36 C26 C27 113.5 99.8
H362 C36 C26 C25 293.8 279.8
C26 C27 C39 H39 72.9 104.6
C39 C27 C26 C28 181.4 180.0
C27 C26 C36 H361 222.9 219.0
C27 C26 C36 H362 113.5 99.8
C36 C26 C27 C25 180.3 180.0
C27 C26 C25 C24 353.7 360.0
C27 C26 C25 H25 173.7 179.9
C26 C27 C28 C22 349.3 0.0
C26 C27 C28 H28 169.2 180.0
C25 C26 C36 H361 43.2 39.0
C25 C26 C36 H362 293.8 279.8
C36 C26 C25 C27 179.7 180.0
C25 C26 C27 C28 14.2 0.0
C22 C24 C25 C26 354.9 0.0
C26 C25 C24 H24 175.0 180.0
C24 C25 C26 H25 180.0 180.0
C28 C27 C39 H39 254.4 284.7
C39 C27 C28 C26 178.5 180.0
C28 C27 C26 C25 14.2 0.0
C22 C28 C27 H28 180.1 180.0
C27 C28 C22 N21 178.7 180.0
C27 C28 C22 C24 359.6 359.9
C27 C28 C22 H28 179.9 180.0
N21 C22 C28 C24 179.1 180.0
C28 C22 N21 C20 62.6 213.3
C28 C22 N21 H21 242.6 33.2
C28 C22 C24 C25 8.5 0.0
C28 C22 C24 H24 188.5 180.0
C27 C28 H28 C22 180.1 180.0
H28 C28 C22 N21 358.8 360.0
H28 C28 C22 C24 179.7 180.0
N21 C22 C28 H28 358.8 360.0
C28 C22 N21 C24 180.9 180.0
N21 C22 C24 C25 189.3 180.0
N21 C22 C24 H24 9.3 0.0
C20 N21 C22 H21 180.0 180.1
C22 N21 C20 O23 335.7 5.5
C22 N21 C20 C11 154.9 185.4
C26 C25 C24 C22 354.9 0.0
C24 C22 C28 H28 179.7 180.0
C28 C22 C24 N21 179.2 180.0
C24 C22 N21 C20 241.7 33.3
C24 C22 N21 H21 61.8 213.2
C25 C24 C22 H24 180.0 180.0
C22 C24 C25 H25 174.9 180.0
C20 N21 C22 C24 241.7 33.3
C22 N21 C20 H21 180.0 179.9
O23 C20 N21 C11 180.7 180.1
N21 C20 C11 C12 200.6 0.1
N21 C20 C11 C10 20.7 179.7
H21 N21 C22 C24 61.8 213.2
C22 N21 H21 C20 180.0 180.1
H21 N21 C20 O23 155.6 185.6
H21 N21 C20 C11 334.9 5.4
O23 C20 N21 H21 155.6 185.6
N21 C20 O23 C11 179.2 179.9
O23 C20 C11 C12 19.9 180.0
O23 C20 C11 C10 199.9 359.6
C11 C20 N21 H21 334.9 5.4
N21 C20 C11 O23 180.8 180.1
C12 C11 C20 C10 179.9 180.4
C20 C11 C12 C13 182.2 180.0
C20 C11 C12 H12 2.2 359.9
C20 C11 C10 C3 179.4 179.8
C20 C11 C10 H10 359.4 0.1
C20 C11 C12 C10 180.1 179.5
C12 C11 C10 C3 359.5 359.3
C12 C11 C10 H10 179.5 179.7
C13 C12 C11 H12 180.0 180.1
C11 C12 C13 C4 358.2 359.9
C11 C12 C13 H13 178.1 180.0
C20 C11 C10 C12 179.9 180.5
C10 C11 C12 C13 2.1 0.4
C10 C11 C12 H12 182.1 180.3
C4 C3 C10 C11 358.7 0.6
C2 C3 C10 C11 174.9 180.4
C3 C10 C11 H10 180.0 179.7
C13 C12 C11 C10 2.1 0.4
C11 C12 C13 H12 180.0 179.9
C4 C13 C12 H13 180.0 179.9
C12 C13 C4 C5 187.8 180.0
C12 C13 C4 C3 359.9 0.0
H12 C12 C11 C10 182.1 180.3
C11 C12 H12 C13 180.0 180.1
H12 C12 C13 C4 178.1 180.0
H12 C12 C13 H13 358.1 0.0
C4 C13 C12 H12 178.1 180.0
C12 C13 C4 H13 180.0 180.1
C5 C4 C13 C3 187.9 180.0
C13 C4 C5 C6 178.1 180.0
C13 C4 C5 H5 358.1 0.0
C13 C4 C3 C2 185.2 180.0
C13 C4 C3 C10 1.6 359.7
H13 C13 C12 H12 358.1 0.0
C12 C13 H13 C4 180.0 179.9
H13 C13 C4 C5 7.8 359.9
H13 C13 C4 C3 180.0 180.0
C5 C4 C13 H13 7.8 359.9
C13 C4 C5 C3 172.1 180.0
C5 C4 C3 C2 357.5 360.0
C5 C4 C3 C10 173.9 179.8
C6 C5 C4 H5 180.0 179.9
C4 C5 C6 C1 353.0 0.1
C4 C5 C6 C17 170.6 180.0
C11 C10 C3 C4 358.7 0.6
C3 C4 C13 H13 180.0 180.0
C13 C4 C3 C5 187.7 180.0
C3 C4 C5 C6 5.9 359.9
C3 C4 C5 H5 185.9 180.0
C1 C2 C3 C4 0.3 0.0
C4 C3 C2 H2 180.3 180.0
C2 C3 C4 C10 183.6 180.2
C4 C3 C10 H10 178.7 180.2
C6 C5 C4 C3 5.9 359.9
C4 C5 C6 H5 180.0 180.1
C1 C6 C5 C17 182.4 180.2
C5 C6 C1 C2 4.7 359.9
C5 C6 C1 H1 184.7 180.0
C5 C6 C17 N18 29.3 180.0
C5 C6 C17 N19 210.1 0.1
H5 C5 C4 C3 185.9 180.0
C4 C5 H5 C6 180.0 179.9
H5 C5 C6 C1 173.0 180.1
H5 C5 C6 C17 350.6 359.9
C1 C6 C5 H5 173.0 180.1
C5 C6 C1 C17 177.6 179.8
C1 C6 C17 N18 206.9 359.8
C1 C6 C17 N19 27.6 179.9
C2 C1 C6 H1 180.0 179.9
C6 C1 C2 C3 358.5 0.0
C6 C1 C2 H2 178.5 180.0
C17 C6 C5 H5 350.6 359.9
C5 C6 C17 C1 182.4 180.2
C17 C6 C1 C2 187.1 180.1
C17 C6 C1 H1 7.1 0.2
N18 C17 C6 N19 179.2 179.9
C6 C17 N18 H181 180.0 180.1
C6 C17 N18 H182 54.7 0.1
C6 C17 N19 H19 199.0 180.0
C4 C3 C2 C1 0.3 0.0
C2 C1 C6 C17 187.1 180.1
C6 C1 C2 H1 180.0 180.1
C3 C2 C1 H2 180.0 180.0
C1 C2 C3 C10 184.0 180.3
H1 C1 C6 C17 7.1 0.2
C6 C1 H1 C2 180.0 179.9
H1 C1 C2 C3 178.5 179.9
H1 C1 C2 H2 358.5 359.9
C11 C10 C3 C2 174.9 180.4
C4 C3 C2 C10 176.3 179.8
C3 C2 C1 H1 178.5 179.9
C1 C2 C3 H2 180.0 180.0
C2 C3 C10 H10 354.9 0.0
H2 C2 C1 H1 358.5 359.9
C1 C2 H2 C3 180.0 180.0
H2 C2 C3 C10 4.0 0.3
C11 C10 C3 H10 180.0 180.3
C4 C3 C10 C2 183.7 180.2
C10 C3 C2 H2 4.0 0.3
C11 C10 H10 C3 180.0 179.7
C6 C17 N18 N19 180.7 180.1
N18 C17 N19 H19 19.7 0.1
H181 N18 C17 H182 125.2 179.9
C6 C17 N19 N18 179.3 179.9
N19 C17 N18 H181 359.2 360.0
N19 C17 N18 H182 234.0 180.0
H181 N18 C17 N19 359.2 360.0
C17 N18 H181 H182 234.8 180.1
H182 N18 C17 N19 234.0 180.0
C17 N18 H182 H181 132.6 179.9
C26 C25 C24 H25 180.0 180.0
C22 C24 C25 H24 180.0 180.0
C22 C24 H24 C25 180.0 180.0
H24 C24 C25 H25 354.9 0.0
C26 C25 H25 C24 180.0 180.0
H25 C25 C24 H24 354.9 0.0