PDB Chemical Component 48U

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 48U

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C7	N3	1.471	1.465
O4	C28	1.221	1.216
C28	N3	1.336	1.349
C28	C27	1.493	1.476
N3	C8	1.472	1.465
C24	C27	1.387	1.397
C24	C21	1.380	1.377
C27	C26	1.395	1.397
C21	C15	1.388	1.391
C26	C22	1.386	1.378
C15	C22	1.387	1.393
C15	N2	1.431	1.396
C22	F1	1.343	1.351
N2	C50	1.357	1.344
N2	C14	1.456	1.468
O3	C50	1.222	1.213
C50	C12	1.524	1.513
C14	C13	1.525	1.547
C13	C12	1.532	1.546
N1	C12	1.445	1.466
N1	S1	1.615	1.656
O2	S1	1.436	1.421
S1	C6	1.738	1.763
S1	O1	1.430	1.421
C6	C5	1.333	1.329
S2	C4	1.731	1.759
S2	C1	1.719	1.759
C5	C4	1.468	1.471
C4	C3	1.390	1.351
CL1	C1	1.732	1.736
C1	C2	1.355	1.338
C3	C2	1.398	1.378
C8	H1	1.100	1.090
C8	H2	1.100	1.090
C8	H3	1.100	1.090
C5	H4	1.080	1.080
C6	H5	1.080	1.080
N1	H6	1.000	0.969
C2	H7	1.080	1.080
C7	H8	1.100	1.089
C7	H9	1.100	1.090
C7	H10	1.100	1.090
C26	H11	1.080	1.079
C21	H12	1.080	1.080
C24	H13	1.080	1.080
C12	H14	1.100	1.090
C13	H15	1.099	1.089
C13	H16	1.100	1.090
C14	H17	1.100	1.090
C14	H18	1.100	1.090
C3	H19	1.080	1.080

Bond Angles for 48U

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O4	C28	C27	117.8	120.1
C28	C27	C26	123.4	120.1
N3	C8	H1	109.5	109.4
N3	C8	H2	109.4	109.5
N3	C8	H3	109.5	109.5
C24	C21	H12	119.3	120.0
C27	C26	C22	118.1	119.9
C27	C26	H11	121.0	120.1
C21	C15	N2	121.3	119.9
C26	C22	F1	119.4	120.0
C22	C26	H11	120.9	120.0
C15	N2	C50	123.5	124.3
C15	N2	C14	122.5	124.4
C50	N2	C14	114.0	111.3
N2	C50	C12	108.0	110.1
N2	C14	C13	103.8	105.4
N2	C14	H17	110.9	110.2
N2	C14	H18	110.9	110.2
O3	C50	C12	125.4	124.9
N1	C12	C50	110.1	110.4
C50	C12	H14	109.2	110.5
C14	C13	H15	110.6	111.2
C14	C13	H16	110.6	110.8
C13	C12	H14	109.1	110.6
C12	N1	S1	119.5	120.0
C12	N1	H6	106.9	120.0
N1	C12	H14	110.3	110.4
N1	S1	O1	104.3	106.4
S1	N1	H6	106.9	120.0
O2	S1	O1	121.3	123.2
S1	C6	H5	121.3	120.0
C6	C5	C4	126.3	120.0
C6	C5	H4	116.8	120.0
S2	C4	C3	110.4	109.4
C5	C4	C3	124.1	125.3
C4	C5	H4	116.8	120.0
C4	C3	H19	123.0	122.6
C1	C2	H7	124.4	122.4
C3	C2	H7	124.4	122.5
H1	C8	H2	109.5	109.5
H1	C8	H3	109.5	109.5
H2	C8	H3	109.5	109.5
H8	C7	H9	109.5	109.4
H8	C7	H10	109.5	109.5
H9	C7	H10	109.5	109.5
H15	C13	H16	109.5	110.9
H17	C14	H18	109.5	110.3

Torsion Angles for 48U

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C7	N3	C8	H1	180.0	0.0
C7	N3	C8	H2	300.0	120.0
C7	N3	C8	H3	60.0	240.0
O4	C28	C27	C26	127.4	214.9
C28	N3	C8	H1	0.4	180.0
C28	N3	C8	H2	120.4	299.9
C28	N3	C8	H3	240.4	60.0
C28	C27	C26	C22	180.9	179.9
C28	C27	C26	H11	0.9	360.0
H1	C8	N3	H2	240.0	240.1
H1	C8	N3	H3	120.0	120.0
H2	C8	N3	H3	240.0	239.9
C24	C27	C26	H11	179.5	180.3
C24	C21	C15	N2	180.8	179.8
C27	C26	C22	F1	180.0	180.0
C22	C26	C27	H11	180.0	179.9
C21	C15	N2	C50	300.2	90.1
C21	C15	N2	C14	119.0	269.7
C27	C26	C22	H11	180.0	180.1
C15	C22	C26	H11	180.1	180.0
C50	N2	C15	C14	181.1	180.4
C15	N2	C50	C12	175.6	180.4
C15	N2	C14	C13	197.5	162.9
C15	N2	C14	H17	316.5	282.0
C15	N2	C14	H18	78.4	44.0
F1	C22	C26	H11	0.0	359.9
C15	N2	C50	C14	179.0	179.7
C50	N2	C14	C13	16.4	342.5
C50	N2	C14	H17	135.5	101.7
C50	N2	C14	H18	257.3	223.7
O3	C50	N2	C12	179.9	179.9
N1	C12	C50	N2	226.6	257.6
N2	C50	C12	H14	105.3	135.1
C15	N2	C14	C50	181.0	180.3
C14	N2	C50	C12	356.7	0.7
N2	C14	C13	H15	97.2	267.6
N2	C14	C13	H16	218.6	143.8
H17	C14	N2	H18	238.2	238.0
O3	C50	N2	C14	176.6	180.7
N2	C50	O3	C12	180.1	180.1
N1	C12	C50	O3	46.6	77.6
O3	C50	C12	H14	285.4	315.2
C12	C50	N2	C14	356.7	0.7
C13	C12	C50	H14	243.5	241.1
C50	C12	N1	S1	243.8	263.5
C50	C12	N1	H6	5.2	83.6
N1	C12	C50	H14	121.3	122.5
N2	C14	C13	H17	119.1	119.0
N2	C14	C13	H18	240.9	241.1
C14	C13	C12	H14	263.9	216.2
H15	C13	C14	H16	238.6	123.8
N2	C14	C13	C12	337.9	25.8
C50	C12	C13	H14	116.6	118.8
C13	C12	N1	S1	127.3	148.8
C13	C12	N1	H6	248.7	328.9
N1	C12	C13	H14	236.5	237.4
N2	C50	C12	N1	226.6	257.6
O3	C50	C12	N1	46.6	77.6
C50	C12	N1	H14	239.4	237.5
C13	C12	N1	H14	122.8	122.7
C12	N1	S1	O1	301.8	178.6
S1	N1	C12	H6	238.6	179.9
S1	N1	C12	C50	243.8	263.5
C12	N1	S1	H6	121.4	180.1
S1	N1	C12	H14	4.4	26.0
O2	S1	N1	O1	232.7	133.0
N1	S1	C6	H5	58.3	295.0
N1	S1	O2	O1	115.6	237.0
O2	S1	N1	H6	53.0	131.4
O2	S1	C6	H5	306.8	48.5
S1	C6	C5	H4	359.4	360.0
O1	S1	N1	H6	180.4	358.5
O1	S1	C6	H5	171.2	181.5
C6	C5	C4	C3	195.3	180.0
C4	C5	C6	H4	180.0	180.0
C5	C4	S2	C3	179.9	180.1
S2	C4	C5	H4	195.5	179.9
S2	C4	C3	H19	179.7	180.0
C1	S2	C4	C3	0.4	0.0
S2	C1	C2	H7	180.3	180.0
C6	C5	C4	H4	180.0	180.0
S2	C4	C5	C3	180.1	179.9
C5	C4	C3	H19	359.9	359.9
C3	C4	C5	H4	15.3	360.0
C4	C3	C2	H7	180.0	180.0
CL1	C1	C2	H7	0.2	359.9
C3	C2	C1	H7	180.0	180.3
C5	C4	C3	C2	179.8	180.0
C1	C2	C3	H7	180.0	179.7
N3	C8	H1	H2	120.0	119.9
N3	C8	H1	H3	240.0	240.0
H2	C8	H1	H3	120.0	120.1
N3	C8	H2	H1	240.0	240.1
N3	C8	H2	H3	120.0	120.1
H1	C8	H2	H3	240.0	239.9
N3	C8	H3	H1	120.0	119.9
N3	C8	H3	H2	240.0	240.0
H1	C8	H3	H2	120.0	120.0
C6	C5	H4	C4	180.0	180.0
H4	C5	C4	C3	15.3	360.0
H5	C6	C5	C4	359.4	360.0
H5	C6	C5	H4	179.4	180.0
H6	N1	C12	C50	5.2	83.6
C12	N1	H6	S1	230.9	179.9
H6	N1	C12	H14	125.8	206.1
H6	N1	S1	O1	180.4	358.5
H9	C7	H8	H10	120.0	120.0
H8	C7	H9	H10	240.0	240.0
H8	C7	H10	H9	120.0	120.0
C27	C26	H11	C22	180.0	179.9
H11	C26	C22	F1	0.0	359.9
H12	C21	C15	N2	0.8	359.9
H13	C24	C21	H12	0.0	0.1
N1	C12	H14	C50	238.8	237.5
H14	C12	N1	S1	4.4	26.0
H14	C12	N1	H6	125.8	206.1
C14	C13	H15	H16	122.1	236.3
H15	C13	C12	H14	144.6	334.6
C14	C13	H16	H15	237.9	123.9
H16	C13	C12	H14	23.2	98.3
N2	C14	H17	C13	245.3	244.0
N2	C14	H17	H18	122.7	121.9
H17	C14	C13	H15	338.1	148.6
H17	C14	C13	H16	99.5	24.8
N2	C14	H18	C13	114.7	115.8
N2	C14	H18	H17	237.3	238.0
H18	C14	C13	H15	216.3	26.4
H18	C14	C13	H16	337.7	262.7
H19	C3	C2	H7	360.0	0.2