PDB Chemical Component 485

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 485

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O1	C2	1.340	1.359
O1	H1	0.951	0.967
C2	C3	1.398	1.386
C2	C7	1.404	1.387
C3	C4	1.432	1.381
C3	H3	1.103	1.080
C4	C5	1.408	1.382
C4	H4	1.102	1.080
C5	C6	1.430	1.382
C5	C8	1.506	1.508
C6	C7	1.387	1.382
C6	H6	1.103	1.080
C7	H7	1.103	1.080
C8	C9	1.517	1.529
C8	H81	1.115	1.090
C8	H82	1.116	1.091
C9	N10	1.509	1.469
C9	C11	1.539	1.508
C9	H9	1.114	1.089
N10	H101	1.019	1.009
N10	H102	1.020	1.009
C11	O12	1.194	1.213
C11	N13	1.341	1.347
N13	C14	1.521	1.466
N13	H13	1.019	0.968
C14	C15	1.591	1.506
C14	C18	1.521	1.530
C14	H14	1.115	1.089
C15	O16	1.397	1.342
C15	O17	1.274	1.209
O16	H16	0.950	0.967
C18	C19	1.527	1.530
C18	O23	1.510	1.425
C18	H18	1.115	1.090
C19	C20	1.551	1.533
C19	O24	1.406	1.428
C19	H19	1.115	1.090
C20	C21	1.544	1.531
C20	O25	1.398	1.429
C20	H20	1.114	1.090
C21	C22	1.592	1.531
C21	O26	1.440	1.429
C21	H21	1.114	1.090
C22	O23	1.485	1.425
C22	C27	1.550	1.530
C22	H2	1.115	1.090
O24	H24	0.949	0.967
O25	H25	0.949	0.966
O26	H26	0.950	0.968
C27	H271	1.115	1.090
C27	H272	1.114	1.090
C27	H273	1.116	1.091

Bond Angles for 485

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	O1	H1	119.8	106.8
O1	C2	C3	119.8	120.1
O1	C2	C7	119.1	120.0
C3	C2	C7	121.0	119.9
C2	C3	C4	119.2	120.0
C2	C3	H3	119.2	120.0
C2	C7	C6	120.6	120.0
C2	C7	H7	120.3	120.0
C4	C3	H3	121.6	120.1
C3	C4	C5	119.5	120.0
C3	C4	H4	121.1	120.0
C5	C4	H4	119.5	120.0
C4	C5	C6	120.1	120.1
C4	C5	C8	120.4	119.9
C6	C5	C8	119.5	119.9
C5	C6	C7	119.6	120.0
C5	C6	H6	121.8	120.0
C5	C8	C9	114.5	109.5
C5	C8	H81	110.4	109.5
C5	C8	H82	110.3	109.4
C7	C6	H6	118.7	120.0
C6	C7	H7	119.1	120.0
C9	C8	H81	110.4	109.5
C9	C8	H82	110.4	109.5
C8	C9	N10	112.4	109.4
C8	C9	C11	109.6	109.5
C8	C9	H9	108.4	109.5
H81	C8	H82	99.9	109.5
N10	C9	C11	112.4	109.4
N10	C9	H9	105.3	109.5
C9	N10	H101	112.5	106.7
C9	N10	H102	111.1	106.7
C11	C9	H9	108.5	109.5
C9	C11	O12	120.4	120.0
C9	C11	N13	116.8	119.9
H101	N10	H102	111.1	106.7
O12	C11	N13	122.8	120.0
C11	N13	C14	126.8	119.9
C11	N13	H13	109.4	120.1
C14	N13	H13	123.8	120.0
N13	C14	C15	112.7	109.5
N13	C14	C18	109.1	109.4
N13	C14	H14	109.0	109.5
C15	C14	C18	113.6	109.5
C15	C14	H14	104.1	109.5
C14	C15	O16	113.4	120.0
C14	C15	O17	122.8	120.0
C18	C14	H14	108.1	109.5
C14	C18	C19	111.8	109.3
C14	C18	O23	111.0	109.5
C14	C18	H18	106.1	109.4
O16	C15	O17	123.9	120.0
C15	O16	H16	113.4	120.0
C19	C18	O23	107.0	109.8
C19	C18	H18	110.2	109.3
C18	C19	C20	110.1	109.0
C18	C19	O24	109.6	109.6
C18	C19	H19	108.9	109.5
O23	C18	H18	111.0	109.5
C18	O23	C22	115.9	107.6
C20	C19	O24	109.1	109.6
C20	C19	H19	109.4	109.5
C19	C20	C21	112.0	108.6
C19	C20	O25	106.9	109.6
C19	C20	H20	109.6	109.6
O24	C19	H19	109.8	109.5
C19	O24	H24	109.6	106.9
C21	C20	O25	109.8	109.7
C21	C20	H20	106.7	109.7
C20	C21	C22	109.5	109.0
C20	C21	O26	106.6	109.6
C20	C21	H21	111.6	109.6
O25	C20	H20	111.9	109.6
C20	O25	H25	106.9	106.8
C22	C21	O26	110.4	109.7
C22	C21	H21	107.9	109.5
C21	C22	O23	106.2	109.7
C21	C22	C27	115.9	109.4
C21	C22	H2	106.6	109.4
O26	C21	H21	110.8	109.5
C21	O26	H26	106.6	106.9
O23	C22	C27	106.9	109.4
O23	C22	H2	115.6	109.4
C27	C22	H2	106.0	109.4
C22	C27	H271	115.9	109.5
C22	C27	H272	109.9	109.5
C22	C27	H273	109.9	109.5
H271	C27	H272	109.9	109.5
H271	C27	H273	109.8	109.5
H272	C27	H273	100.3	109.5

Torsion Angles for 485

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C3	C2	O1	C7	180.2	180.0
O1	C2	C3	C4	180.0	180.0
O1	C2	C3	H3	0.0	0.1
O1	C2	C7	C6	180.0	179.7
O1	C2	C7	H7	360.0	0.0
H1	O1	C2	C3	180.0	90.0
H1	O1	C2	C7	359.8	270.0
C3	C2	O1	H1	180.0	90.0
O1	C2	C3	C7	179.8	180.0
C3	C2	C7	C6	359.8	359.7
C3	C2	C7	H7	179.8	180.0
C4	C3	C2	H3	180.0	179.9
C2	C3	C4	C5	0.0	359.9
C2	C3	C4	H4	180.0	180.0
C7	C2	O1	H1	359.8	270.0
O1	C2	C7	C3	180.2	180.0
C7	C2	C3	C4	0.2	0.0
C7	C2	C3	H3	180.2	180.1
C5	C6	C7	C2	360.0	0.6
C2	C7	C6	H6	180.0	180.1
C6	C7	C2	H7	180.0	179.7
C4	C3	C2	C7	0.2	0.0
C2	C3	C4	H3	180.0	180.1
C5	C4	C3	H4	180.0	179.9
C3	C4	C5	C6	359.8	0.3
C3	C4	C5	C8	179.4	180.0
H3	C3	C2	C7	180.2	180.1
C2	C3	H3	C4	180.0	179.9
H3	C3	C4	C5	180.0	179.9
H3	C3	C4	H4	0.0	360.0
C5	C4	C3	H3	180.0	179.9
C3	C4	C5	H4	180.0	180.1
C6	C5	C4	C8	180.3	180.3
C4	C5	C6	C7	0.2	359.4
C4	C5	C6	H6	180.2	179.9
C4	C5	C8	C9	291.9	90.1
C4	C5	C8	H81	57.2	330.0
C4	C5	C8	H82	166.7	210.0
H4	C4	C3	H3	0.0	360.0
C3	C4	H4	C5	180.0	179.9
H4	C4	C5	C6	179.8	180.3
H4	C4	C5	C8	359.4	360.0
C2	C7	C6	C5	360.0	0.6
C6	C5	C4	H4	179.8	180.3
C4	C5	C6	C8	179.7	179.7
C6	C5	C8	C9	111.6	269.8
C6	C5	C8	H81	236.9	149.7
C6	C5	C8	H82	346.3	29.7
C7	C6	C5	H6	180.0	179.5
C5	C6	C7	H7	180.0	180.3
C8	C5	C4	H4	359.4	360.0
C4	C5	C8	C6	180.3	180.3
C8	C5	C6	C7	180.6	179.7
C8	C5	C6	H6	0.5	0.2
C9	C8	C5	H81	234.7	120.0
C9	C8	C5	H82	125.2	240.0
C5	C8	C9	N10	310.4	299.9
C5	C8	C9	C11	184.7	180.0
C5	C8	C9	H9	66.5	60.0
H81	C8	C5	H82	250.5	120.0
C2	C7	C6	H7	180.0	180.3
C7	C6	C5	C8	180.6	179.7
C5	C6	C7	H6	180.0	180.5
H6	C6	C5	C8	0.5	0.2
C5	C6	H6	C7	180.0	179.5
H6	C6	C7	H7	360.0	359.8
C2	C7	H7	C6	180.0	179.7
H7	C7	C6	H6	360.0	359.8
C5	C8	C9	H81	125.3	240.0
C5	C8	C9	H82	234.8	119.9
H81	C8	C9	H82	109.5	240.0
N10	C9	C8	C11	125.8	119.9
N10	C9	C8	H9	244.0	239.9
C8	C9	N10	H101	180.0	300.0
C8	C9	N10	H102	54.7	53.8
C11	C9	C8	H9	118.2	120.0
C8	C9	C11	O12	99.3	89.9
C8	C9	C11	N13	279.5	270.0
C5	C8	H81	C9	232.4	120.0
C5	C8	H81	H82	116.2	240.0
C9	C8	H81	H82	243.8	120.0
H81	C8	C9	N10	185.2	60.0
H81	C8	C9	C11	59.4	300.0
H81	C8	C9	H9	301.2	180.0
C5	C8	H82	C9	127.6	240.0
C5	C8	H82	H81	243.8	120.0
C9	C8	H82	H81	116.2	239.9
H82	C8	C9	N10	75.7	180.0
H82	C8	C9	C11	309.9	60.1
H82	C8	C9	H9	191.7	300.1
N10	C9	C8	H81	185.2	60.0
N10	C9	C8	H82	75.7	180.0
C8	C9	N10	C11	235.7	240.0
C8	C9	N10	H9	117.8	120.1
C11	C9	N10	H9	242.1	240.0
N10	C9	C11	O12	333.5	330.0
N10	C9	C11	N13	153.6	150.1
H101	N10	C9	H102	125.3	246.2
C11	C9	C8	H81	59.4	300.0
C11	C9	C8	H82	309.9	60.1
C8	C9	C11	N10	125.8	119.9
C8	C9	C11	H9	241.8	240.0
N10	C9	C11	H9	116.0	120.0
C11	C9	N10	H101	304.2	60.0
C11	C9	N10	H102	179.0	173.8
O12	C11	C9	N13	179.8	179.9
C9	C11	N13	C14	180.7	180.0
C9	C11	N13	H13	0.7	359.9
H9	C9	C8	H81	301.2	180.0
H9	C9	C8	H82	191.7	300.1
C8	C9	H9	N10	239.5	240.0
C8	C9	H9	C11	118.9	120.0
N10	C9	H9	C11	239.5	240.0
H9	C9	N10	H101	62.2	180.0
H9	C9	N10	H102	296.9	293.8
H9	C9	C11	O12	217.4	209.9
H9	C9	C11	N13	37.6	30.0
H101	N10	C9	C11	304.2	60.0
H101	N10	C9	H9	62.2	180.0
C9	N10	H101	H102	234.7	113.8
H102	N10	C9	C11	179.0	173.8
H102	N10	C9	H9	296.9	293.8
C9	N10	H102	H101	126.1	246.2
O12	C11	C9	H9	217.4	209.9
C9	C11	O12	N13	180.2	180.1
O12	C11	N13	C14	0.9	0.1
O12	C11	N13	H13	180.9	180.0
N13	C11	C9	H9	37.6	30.0
C9	C11	N13	O12	179.8	179.9
C14	N13	C11	H13	180.0	180.1
C11	N13	C14	C15	284.1	269.9
C11	N13	C14	C18	156.9	150.0
C11	N13	C14	H14	39.1	30.0
C11	N13	C14	H13	180.0	179.9
C15	C14	N13	C18	127.2	119.9
C15	C14	N13	H14	245.0	240.0
N13	C14	C15	O16	351.5	330.1
N13	C14	C15	O17	170.5	150.0
C18	C14	N13	H14	117.8	120.0
N13	C14	C18	C19	293.5	299.6
N13	C14	C18	O23	52.8	60.0
N13	C14	C18	H18	173.5	179.9
C11	N13	H13	C14	180.0	180.1
H13	N13	C14	C15	104.1	90.0
H13	N13	C14	C18	336.9	330.1
H13	N13	C14	H14	219.1	210.1
C15	C14	N13	H13	104.1	90.0
N13	C14	C15	C18	235.3	240.1
N13	C14	C15	H14	118.0	120.0
C18	C14	C15	H14	242.7	240.0
C15	C14	C18	C19	166.9	179.7
C15	C14	C18	O23	286.2	300.0
C15	C14	C18	H18	46.8	60.0
O16	C15	C14	O17	181.0	180.1
C14	C15	O16	H16	180.0	180.0
C18	C14	N13	H13	336.9	330.1
N13	C14	C18	C15	126.6	119.9
N13	C14	C18	H14	241.6	240.0
C15	C14	C18	H14	114.9	120.1
C18	C14	C15	O16	116.2	90.0
C18	C14	C15	O17	295.2	269.9
C19	C18	C14	O23	240.7	239.6
C19	C18	C14	H18	120.1	119.7
C14	C18	C19	C20	178.3	181.4
C14	C18	C19	O24	298.2	301.3
C14	C18	C19	H19	58.4	61.5
O23	C18	C14	H18	239.4	240.1
C14	C18	O23	C22	174.4	172.4
H14	C14	N13	H13	219.1	210.1
N13	C14	H14	C15	239.5	240.0
N13	C14	H14	C18	118.5	120.0
C15	C14	H14	C18	238.9	240.0
H14	C14	C15	O16	233.5	210.1
H14	C14	C15	O17	52.5	30.0
H14	C14	C18	C19	52.0	59.6
H14	C14	C18	O23	171.3	180.0
H14	C14	C18	H18	291.9	299.9
O16	C15	C14	C18	116.2	90.0
O16	C15	C14	H14	233.5	210.1
C14	C15	O16	O17	179.0	179.9
O17	C15	C14	C18	295.2	269.9
O17	C15	C14	H14	52.5	30.0
C14	C15	O17	O16	181.1	180.1
O17	C15	O16	H16	1.0	0.1
H16	O16	C15	O17	1.0	0.1
C19	C18	C14	H14	52.0	59.6
C14	C18	C19	O23	121.6	120.1
C14	C18	C19	H18	242.3	240.3
O23	C18	C19	H18	120.7	120.1
C19	C18	O23	C22	296.5	292.4
C20	C19	C18	O24	240.0	240.0
C20	C19	C18	H19	119.9	119.8
C18	C19	C20	C21	302.8	306.3
C18	C19	C20	O25	182.4	186.4
C18	C19	C20	H20	61.0	66.1
O24	C19	C18	H19	239.9	239.8
C18	C19	O24	H24	180.0	180.0
O23	C18	C14	H14	171.3	180.0
C14	C18	O23	C19	237.9	239.9
C14	C18	O23	H18	117.7	119.9
C19	C18	O23	H18	239.8	240.0
O23	C18	C19	C20	56.7	61.2
O23	C18	C19	O24	176.6	181.2
O23	C18	C19	H19	296.8	301.4
C21	C22	O23	C18	62.0	67.6
C18	O23	C22	C27	186.3	187.7
C18	O23	C22	H2	304.0	307.6
H18	C18	C14	H14	291.9	299.9
C14	C18	H18	C19	121.1	119.7
C14	C18	H18	O23	239.4	240.1
C19	C18	H18	O23	118.3	120.4
H18	C18	C19	C20	295.9	301.1
H18	C18	C19	O24	55.9	61.0
H18	C18	C19	H19	176.1	181.3
H18	C18	O23	C22	56.7	52.5
C20	C19	C18	O23	56.7	61.2
C20	C19	C18	H18	295.9	301.1
C18	C19	C20	O24	120.2	119.9
C18	C19	C20	H19	240.4	240.2
O24	C19	C20	H19	120.2	120.2
C20	C19	O24	H24	300.5	299.6
C21	C20	C19	O25	120.3	119.9
C21	C20	C19	H20	241.8	240.1
C19	C20	C21	C22	55.8	53.8
C19	C20	C21	O26	296.4	293.8
C19	C20	C21	H21	175.3	173.6
O25	C20	C19	H20	121.4	120.3
C19	C20	O25	H25	180.0	180.0
O24	C19	C18	O23	176.6	181.2
O24	C19	C18	H18	55.9	61.0
C18	C19	O24	C20	239.4	240.4
C18	C19	O24	H19	119.5	120.2
C20	C19	O24	H19	240.1	239.8
O24	C19	C20	C21	182.5	186.3
O24	C19	C20	O25	62.2	66.4
O24	C19	C20	H20	300.8	306.2
H19	C19	C18	O23	296.8	301.4
H19	C19	C18	H18	176.1	181.3
C18	C19	H19	C20	120.3	119.5
C18	C19	H19	O24	240.0	239.8
C20	C19	H19	O24	119.7	120.3
H19	C19	C20	C21	62.3	66.1
H19	C19	C20	O25	302.0	306.2
H19	C19	C20	H20	180.6	185.9
H19	C19	O24	H24	60.4	59.8
C21	C20	C19	O24	182.5	186.3
C21	C20	C19	H19	62.3	66.1
C19	C20	C21	O25	241.3	240.2
C19	C20	C21	H20	119.9	119.8
O25	C20	C21	H20	238.6	239.6
C21	C20	O25	H25	58.2	60.8
C22	C21	C20	O26	119.4	120.0
C22	C21	C20	H21	240.5	240.2
C20	C21	C22	O23	304.7	298.7
C20	C21	C22	C27	186.2	178.6
C20	C21	C22	H2	68.6	58.7
O26	C21	C20	H21	121.1	120.2
C20	C21	O26	H26	180.0	180.0
O25	C20	C19	O24	62.2	66.4
O25	C20	C19	H19	302.0	306.2
C19	C20	O25	C21	121.7	119.2
C19	C20	O25	H20	240.1	239.7
C21	C20	O25	H20	118.3	120.5
O25	C20	C21	C22	174.5	173.6
O25	C20	C21	O26	55.1	53.6
O25	C20	C21	H21	294.0	293.4
H20	C20	C19	O24	300.8	306.2
H20	C20	C19	H19	180.6	185.9
C19	C20	H20	C21	238.5	240.8
C19	C20	H20	O25	118.4	120.3
C21	C20	H20	O25	239.9	239.4
H20	C20	C21	C22	295.9	294.0
H20	C20	C21	O26	176.5	174.0
H20	C20	C21	H21	55.4	53.8
H20	C20	O25	H25	299.9	300.3
C18	O23	C22	C21	62.0	67.6
C22	C21	C20	O25	174.5	173.6
C22	C21	C20	H20	295.9	294.0
C20	C21	C22	O26	242.9	240.0
C20	C21	C22	H21	121.7	119.8
O26	C21	C22	H21	238.8	239.8
C22	C21	O26	H26	61.1	60.3
O23	C22	C21	C27	118.5	120.1
O23	C22	C21	H2	236.1	239.9
C27	C22	C21	H2	117.7	119.8
C21	C22	C27	H271	180.0	180.2
C21	C22	C27	H272	305.3	300.2
C21	C22	C27	H273	54.8	60.2
O26	C21	C20	O25	55.1	53.6
O26	C21	C20	H20	176.5	174.0
C20	C21	O26	C22	118.9	119.6
C20	C21	O26	H21	238.3	239.8
C22	C21	O26	H21	119.5	120.2
O26	C21	C22	O23	61.8	58.6
O26	C21	C22	C27	303.3	298.5
O26	C21	C22	H2	185.7	178.7
H21	C21	C20	O25	294.0	293.4
H21	C21	C20	H20	55.4	53.8
C20	C21	H21	C22	239.6	240.5
C20	C21	H21	O26	118.6	120.2
C22	C21	H21	O26	239.1	239.7
H21	C21	C22	O23	183.0	178.8
H21	C21	C22	C27	64.5	58.7
H21	C21	C22	H2	306.8	298.9
H21	C21	O26	H26	301.6	300.2
C22	O23	C18	H18	56.7	52.5
O23	C22	C21	O26	61.8	58.6
O23	C22	C21	H21	183.0	178.8
C21	C22	O23	C27	235.7	239.9
C21	C22	O23	H2	118.1	120.0
C27	C22	O23	H2	242.3	240.1
O23	C22	C27	H271	61.9	59.9
O23	C22	C27	H272	187.2	179.9
O23	C22	C27	H273	296.7	299.9
C27	C22	C21	O26	303.3	298.5
C27	C22	C21	H21	64.5	58.7
C21	C22	C27	O23	118.1	120.3
C21	C22	C27	H2	242.0	240.2
O23	C22	C27	H2	123.9	119.9
H271	C27	C22	H272	234.7	240.0
H271	C27	C22	H273	125.2	120.0
H272	C27	C22	H273	250.5	240.0
H2	C22	C21	O26	185.7	178.7
H2	C22	C21	H21	306.8	298.9
C21	C22	H2	O23	242.2	239.8
C21	C22	H2	C27	124.0	119.8
O23	C22	H2	C27	241.8	240.1
H2	C22	C27	H271	298.0	300.0
H2	C22	C27	H272	63.3	60.0
H2	C22	C27	H273	172.8	180.0
H24	O24	C19	H19	60.4	59.8
H25	O25	C20	H20	299.9	300.3
H26	O26	C21	H21	301.6	300.2
H271	C27	C22	H2	298.0	300.0
C22	C27	H271	H272	125.3	120.0
C22	C27	H271	H273	234.8	240.0
H272	C27	H271	H273	109.5	120.0
H272	C27	C22	H2	63.3	60.0
C22	C27	H272	H271	231.4	240.0
C22	C27	H272	H273	115.7	120.0
H271	C27	H272	H273	244.3	240.0
H273	C27	C22	H2	172.8	180.0
C22	C27	H273	H271	128.6	120.0
C22	C27	H273	H272	244.3	240.0
H271	C27	H273	H272	115.7	120.0