PDB Chemical Component 454

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 454

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.392 1.382
C1 C6 1.391 1.383
N1 C8 1.293 1.284
N1 C9 1.479 1.469
C2 C3 1.398 1.382
N2 C8 1.369 1.383
N2 C11 1.450 1.471
N2 C12 1.370 1.366
C3 C4 1.413 1.382
N3 C7 1.532 1.474
N3 C12 1.311 1.300
C4 C5 1.405 1.383
C4 C7 1.539 1.507
N4 C12 1.361 1.375
C5 C6 1.397 1.382
C7 C8 1.556 1.506
C7 C13 1.538 1.507
C9 C10 1.539 1.530
C10 C11 1.524 1.536
C13 C14 1.405 1.382
C13 C18 1.399 1.382
C14 C15 1.395 1.382
C15 C16 1.390 1.383
C16 C17 1.391 1.382
C17 C18 1.396 1.382
C1 H1 1.080 1.080
C2 H2 1.080 1.079
C3 H3 1.080 1.080
N4 HN4 1.000 0.970
N4 HN4A 1.000 0.970
C5 H5 1.080 1.080
C6 H6 1.080 1.080
C9 H9 1.100 1.091
C9 H9A 1.100 1.089
C10 H10 1.100 1.090
C10 H10A 1.100 1.090
C11 H11 1.100 1.090
C11 H11A 1.100 1.091
C14 H14 1.080 1.080
C15 H15 1.080 1.081
C16 H16 1.080 1.079
C17 H17 1.080 1.081
C18 H18 1.080 1.080

Bond Angles for 454

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C6 119.5 120.0
C1 C2 C3 120.0 120.0
C2 C1 H1 120.3 120.0
C1 C2 H2 120.0 120.0
C1 C6 C5 120.7 120.0
C6 C1 H1 120.3 120.0
C1 C6 H6 119.6 120.0
C8 N1 C9 115.3 119.2
N1 C8 N2 128.4 124.6
N1 C8 C7 124.0 130.2
N1 C9 C10 113.0 110.3
N1 C9 H9 108.3 109.3
N1 C9 H9A 108.3 109.3
C2 C3 C4 121.3 120.0
C3 C2 H2 120.0 120.0
C2 C3 H3 119.3 120.0
C8 N2 C11 119.8 121.8
C8 N2 C12 111.0 109.9
N2 C8 C7 105.7 105.2
C11 N2 C12 128.7 128.3
N2 C11 C10 107.2 107.2
N2 C11 H11 110.2 110.0
N2 C11 H11A 110.2 110.0
N2 C12 N3 113.6 113.0
N2 C12 N4 121.0 123.5
C3 C4 C5 117.5 120.0
C3 C4 C7 119.1 120.0
C4 C3 H3 119.3 120.0
C7 N3 C12 107.4 108.1
N3 C7 C4 108.9 110.6
N3 C7 C8 101.6 103.8
N3 C7 C13 107.9 110.6
N3 C12 N4 125.5 123.5
C5 C4 C7 123.4 120.0
C4 C5 C6 121.0 120.0
C4 C5 H5 119.5 120.0
C4 C7 C8 113.2 110.5
C4 C7 C13 113.5 110.5
C12 N4 HN4 120.0 120.0
C12 N4 HN4A 120.0 120.0
C6 C5 H5 119.5 120.0
C5 C6 H6 119.7 120.0
C8 C7 C13 111.0 110.7
C7 C13 C14 119.9 119.9
C7 C13 C18 122.0 120.0
C9 C10 C11 109.1 109.7
C10 C9 H9 108.3 109.3
C10 C9 H9A 108.3 109.4
C9 C10 H10 109.6 109.4
C9 C10 H10A 109.6 109.4
C11 C10 H10 109.6 109.5
C11 C10 H10A 109.6 109.5
C10 C11 H11 110.3 109.9
C10 C11 H11A 110.2 109.9
C14 C13 C18 118.0 120.0
C13 C14 C15 121.4 120.0
C13 C14 H14 119.3 120.0
C13 C18 C17 120.7 120.0
C13 C18 H18 119.7 120.0
C14 C15 C16 119.6 120.0
C15 C14 H14 119.3 120.0
C14 C15 H15 120.2 120.0
C15 C16 C17 119.9 119.9
C16 C15 H15 120.2 120.0
C15 C16 H16 120.1 120.0
C16 C17 C18 120.3 120.1
C17 C16 H16 120.1 120.1
C16 C17 H17 119.8 120.0
C18 C17 H17 119.8 119.9
C17 C18 H18 119.6 120.0
HN4 N4 HN4A 120.0 120.1
H9 C9 H9A 110.6 109.2
H10 C10 H10A 109.3 109.4
H11 C11 H11A 108.7 109.9

Torsion Angles for 454

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C6 C5 359.9 0.0
C6 C1 C2 H1 180.0 180.3
C2 C1 C6 H6 179.9 180.0
C1 C2 C3 C4 359.9 359.9
C3 C2 C1 H2 180.0 180.1
C1 C2 C3 H3 179.9 179.9
C6 C1 C2 C3 0.1 0.1
C2 C1 C6 H1 180.0 179.7
C6 C1 C2 H2 180.1 180.0
C4 C5 C6 C1 0.1 359.9
C1 C6 C5 H5 180.1 180.1
C5 C6 C1 H6 180.0 180.0
C8 N1 C9 C10 338.6 329.0
C8 N1 C9 H9 98.6 89.3
C8 N1 C9 H9A 218.6 208.7
N1 C8 N2 C11 2.0 1.9
N1 C8 N2 C12 189.8 181.6
N2 C8 N1 C7 162.3 179.6
N3 C7 C8 N1 166.0 178.6
C4 C7 C8 N1 49.5 60.0
N1 C8 C7 C13 280.5 297.2
C9 N1 C8 N2 352.6 1.0
C9 N1 C8 C7 190.3 181.5
N1 C9 C10 C11 53.4 57.3
C10 C9 N1 H9 240.0 239.8
C10 C9 N1 H9A 120.0 120.3
N1 C9 C10 H10 173.4 177.4
N1 C9 C10 H10A 293.4 297.2
H9 C9 N1 H9A 240.0 240.6
C3 C2 C1 C6 0.1 0.1
C3 C2 C1 H1 180.1 179.8
C1 C2 C3 H2 180.0 179.9
C2 C3 C4 C5 0.1 0.0
C2 C3 C4 C7 179.6 180.0
C4 C3 C2 H3 180.0 180.0
N2 C8 N1 C9 352.6 1.0
N1 C8 N2 C7 195.2 180.3
C11 N2 C8 C12 172.2 180.3
C8 N2 C11 C10 31.0 25.0
C8 N2 C11 H11 151.0 144.4
C8 N2 C11 H11A 271.0 265.6
C8 N2 C12 N3 9.4 359.1
C8 N2 C12 N4 189.9 179.0
N3 C7 C8 N2 0.4 359.0
C4 C7 C8 N2 243.8 240.4
N2 C8 C7 C13 114.9 117.6
C8 N2 C11 C12 189.3 179.6
C11 N2 C8 C7 166.8 181.5
C11 N2 C12 N3 198.1 178.7
C11 N2 C12 N4 18.6 358.7
C9 C10 C11 N2 304.2 307.3
N2 C11 C10 H10 184.2 187.2
N2 C11 C10 H10A 64.3 67.4
C10 C11 N2 H11 240.0 240.6
C10 C11 N2 H11A 120.0 119.4
H11 C11 N2 H11A 240.0 238.8
C8 N2 C12 C11 171.3 180.3
C12 N2 C8 C7 354.6 1.2
C12 N2 C11 C10 201.6 205.4
C12 N2 C11 H11 321.6 324.8
C12 N2 C11 H11A 81.6 86.0
C7 N3 C12 N2 351.2 0.2
N3 C12 N2 N4 179.5 180.1
N2 C12 N4 HN4 179.4 0.0
N2 C12 N4 HN4A 359.5 180.0
C4 C3 C2 H2 179.9 180.0
C2 C3 C4 H3 180.0 180.0
N3 C7 C4 C3 148.4 31.5
C5 C4 C3 C7 180.5 180.0
C3 C4 C5 C6 359.9 0.1
C3 C4 C5 H5 179.9 179.9
C3 C4 C7 C8 260.6 145.9
C3 C4 C7 C13 28.2 268.7
N1 C8 C7 N3 166.0 178.6
N2 C8 C7 N3 0.4 359.0
N2 C12 N3 C7 351.2 0.2
C3 C4 C7 N3 148.4 31.5
C7 N3 C12 N4 170.7 180.3
C5 C4 C7 N3 327.9 211.4
C4 C7 N3 C8 119.6 118.6
C4 C7 N3 C13 236.4 237.3
C8 C7 N3 C13 116.8 118.7
N3 C7 C13 C14 301.5 328.6
N3 C7 C13 C18 121.3 148.2
N2 C12 N3 N4 180.5 179.9
C12 N3 C7 C4 124.5 119.1
C12 N3 C7 C8 4.9 0.5
C12 N3 C7 C13 248.1 241.8
N3 C12 N4 HN4 360.0 180.0
N3 C12 N4 HN4A 180.0 359.9
C1 C6 C5 C4 0.1 359.9
C3 C4 C5 C7 179.5 180.0
C5 C4 C3 H3 180.1 180.0
N3 C7 C4 C5 327.9 211.4
C5 C4 C7 C8 80.1 325.8
C5 C4 C7 C13 207.7 88.7
C6 C5 C4 H5 180.0 180.1
C4 C5 C6 H6 180.1 179.9
N1 C8 C7 C4 49.5 60.0
N2 C8 C7 C4 243.8 240.4
C3 C4 C7 C5 180.5 180.0
C7 C4 C3 H3 359.7 360.0
C4 C7 N3 C12 124.5 119.1
N3 C7 C4 C8 247.8 245.6
N3 C7 C4 C13 120.2 122.7
C7 C4 C5 C6 180.4 180.1
C7 C4 C5 H5 0.4 360.0
C8 C7 C4 C13 232.3 237.1
C4 C7 C13 C14 62.2 91.3
C4 C7 C13 C18 242.0 271.0
N2 C12 N4 N3 179.4 180.1
HN4 N4 C12 HN4A 180.0 180.1
C5 C6 C1 H1 179.9 180.3
C1 C6 C5 H6 180.0 180.0
C6 C5 C4 C7 180.4 180.1
C4 C5 C6 H5 180.0 179.9
C7 C8 N1 C9 190.3 181.5
N1 C8 C7 N2 165.7 179.6
C7 C8 N2 C11 166.8 181.5
C7 C8 N2 C12 354.6 1.2
C8 C7 N3 C12 4.9 0.5
N3 C7 C8 C4 116.5 118.6
N3 C7 C8 C13 245.5 241.3
C4 C7 C8 C13 129.0 122.8
C8 C7 C13 C14 191.0 214.1
C8 C7 C13 C18 10.8 33.8
C13 C7 N3 C12 248.1 241.8
N3 C7 C13 C4 239.3 237.3
N3 C7 C13 C8 110.5 114.5
C4 C7 C13 C8 231.2 237.2
C14 C13 C7 C18 180.2 180.4
C7 C13 C14 C15 179.7 180.0
C7 C13 C14 H14 359.7 359.9
C7 C13 C18 C17 180.3 179.8
C7 C13 C18 H18 0.3 0.1
N1 C9 C10 H9 120.0 120.2
N1 C9 C10 H9A 240.0 239.7
N2 C11 C10 C9 304.2 307.3
C11 C10 C9 H10 240.0 239.9
C11 C10 C9 H10A 120.0 120.1
C9 C10 C11 H11 184.2 187.8
C9 C10 C11 H11A 64.2 66.7
H9 C9 C10 H9A 120.0 119.5
H10 C10 C9 H10A 240.0 240.2
C10 C11 N2 C12 201.6 205.4
N2 C11 C10 H11 120.0 119.5
N2 C11 C10 H11A 240.0 240.6
C11 C10 C9 H9 293.4 297.1
C11 C10 C9 H9A 173.4 177.6
C9 C10 C11 H10 120.0 120.1
C9 C10 C11 H10A 240.0 239.9
H10 C10 C11 H10A 120.0 119.9
H11 C11 C10 H11A 120.0 121.1
C7 C13 C14 C18 179.8 179.6
C14 C13 C18 C17 0.1 359.4
C14 C13 C18 H18 180.2 179.7
C13 C14 C15 C16 0.4 359.9
C15 C14 C13 H14 180.0 180.1
C13 C14 C15 H15 180.4 180.0
C7 C13 C18 C14 180.2 180.4
C18 C13 C14 C15 359.9 0.4
C18 C13 C14 H14 179.9 180.3
C16 C17 C18 C13 359.6 0.5
C13 C18 C17 H17 179.6 180.3
C17 C18 C13 H18 180.0 179.7
C15 C14 C13 C18 359.9 0.4
C13 C14 C15 H14 180.0 179.9
C14 C15 C16 C17 359.4 360.0
C16 C15 C14 H15 180.0 180.0
C14 C15 C16 H16 179.4 180.0
C16 C15 C14 H14 180.4 180.0
C14 C15 C16 H15 180.0 180.0
C15 C16 C17 C18 0.7 359.8
C17 C16 C15 H16 180.0 179.9
C15 C16 C17 H17 180.7 180.0
C13 C18 C17 C16 359.6 0.5
C17 C16 C15 H15 179.4 179.9
C15 C16 C17 H16 180.0 180.1
C18 C17 C16 H17 180.0 179.8
C16 C17 C18 H18 179.6 180.2
C13 C18 C17 H18 180.0 180.3
C18 C17 C16 H16 180.6 179.8
C16 C17 C18 H17 180.0 180.2
C2 C1 H1 C6 180.0 180.3
H1 C1 C2 C3 180.1 179.8
H1 C1 C2 H2 0.1 359.7
H1 C1 C6 C5 179.9 180.3
H1 C1 C6 H6 359.9 0.3
H2 C2 C1 C6 180.1 180.0
C1 C2 H2 C3 180.0 180.1
H2 C2 C1 H1 0.1 359.7
H2 C2 C3 C4 179.9 180.0
H2 C2 C3 H3 359.9 0.0
C2 C3 H3 C4 180.0 180.0
H3 C3 C2 H2 359.9 0.0
H3 C3 C4 C5 180.1 180.0
H3 C3 C4 C7 359.7 360.0
C12 N4 HN4 HN4A 180.0 179.9
C12 N4 HN4A HN4 180.0 180.1
H5 C5 C4 C7 0.4 360.0
C4 C5 H5 C6 180.0 180.1
H5 C5 C6 H6 0.1 0.1
C1 C6 H6 C5 180.0 180.0
H6 C6 C1 H1 359.9 0.3
H6 C6 C5 H5 0.1 0.1
N1 C9 H9 C10 237.1 239.1
N1 C9 H9 H9A 118.6 119.6
H9 C9 C10 C11 293.4 297.1
C10 C9 H9 H9A 241.5 240.4
H9 C9 C10 H10 53.4 57.2
H9 C9 C10 H10A 173.4 177.0
N1 C9 H9A C10 122.9 120.9
N1 C9 H9A H9 241.4 240.5
H9A C9 C10 C11 173.4 177.6
C10 C9 H9A H9 118.5 119.6
H9A C9 C10 H10 293.4 297.7
H9A C9 C10 H10A 53.4 57.5
C9 C10 H10 C11 240.3 239.7
H10 C10 C9 H9 53.4 57.2
H10 C10 C9 H9A 293.4 297.7
C9 C10 H10 H10A 120.1 119.8
C11 C10 H10 H10A 239.9 240.1
H10 C10 C11 H11 64.2 67.7
H10 C10 C11 H11A 304.2 306.7
C9 C10 H10A C11 119.8 120.2
H10A C10 C9 H9 173.4 177.0
H10A C10 C9 H9A 53.4 57.5
C9 C10 H10A H10 239.9 240.2
C11 C10 H10A H10 120.1 119.9
H10A C10 C11 H11 304.3 307.9
H10A C10 C11 H11A 184.3 186.8
H11 C11 N2 C12 321.6 324.8
N2 C11 H11 C10 241.9 242.2
N2 C11 H11 H11A 120.9 121.2
H11 C11 C10 H10 64.2 67.7
H11 C11 C10 H10A 304.3 307.9
C10 C11 H11 H11A 239.0 239.0
H11A C11 N2 C12 81.6 86.0
N2 C11 H11A C10 118.1 117.7
N2 C11 H11A H11 239.1 238.8
H11A C11 C10 H10 304.2 306.7
H11A C11 C10 H10A 184.3 186.8
C10 C11 H11A H11 121.0 121.0
H14 C14 C13 C18 179.9 180.3
C13 C14 H14 C15 180.0 180.1
H14 C14 C15 C16 180.4 180.0
H14 C14 C15 H15 0.4 0.1
C14 C15 H15 C16 180.0 180.0
H15 C15 C14 H14 0.4 0.1
H15 C15 C16 C17 179.4 179.9
H15 C15 C16 H16 359.4 360.0
C15 C16 H16 C17 180.0 179.9
H16 C16 C15 H15 359.4 360.0
H16 C16 C17 C18 180.6 179.8
H16 C16 C17 H17 0.7 359.9
C16 C17 H17 C18 180.0 179.8
H17 C17 C16 H16 0.7 359.9
H17 C17 C18 H18 359.5 0.0
C13 C18 H18 C17 180.0 179.7
H18 C18 C17 H17 359.5 0.0