PDB Chemical Component 42U
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 42U
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C21 |
N20 |
1.476 |
1.469 |
| C21 |
C22 |
1.533 |
1.531 |
| N20 |
C19 |
1.466 |
1.470 |
| C19 |
C18 |
1.562 |
1.531 |
| C22 |
N17 |
1.510 |
1.469 |
| C18 |
N17 |
1.516 |
1.469 |
| N17 |
C16 |
1.517 |
1.469 |
| C16 |
C15 |
1.574 |
1.530 |
| C15 |
N14 |
1.499 |
1.465 |
| N14 |
C13 |
1.391 |
1.397 |
| C12 |
C13 |
1.429 |
1.389 |
| C12 |
C11 |
1.380 |
1.379 |
| C13 |
C23 |
1.434 |
1.391 |
| C11 |
C10 |
1.404 |
1.394 |
| F28 |
C25 |
1.317 |
1.399 |
| C23 |
C25 |
1.556 |
1.507 |
| C23 |
C24 |
1.402 |
1.378 |
| C10 |
C24 |
1.401 |
1.394 |
| C10 |
C09 |
1.523 |
1.483 |
| C25 |
F26 |
1.319 |
1.399 |
| C25 |
F27 |
1.320 |
1.399 |
| C29 |
C09 |
1.380 |
1.363 |
| C29 |
N30 |
1.352 |
1.349 |
| C09 |
C08 |
1.479 |
1.418 |
| N30 |
N31 |
1.344 |
1.400 |
| C08 |
N31 |
1.372 |
1.315 |
| C08 |
C05 |
1.504 |
1.483 |
| C06 |
C07 |
1.376 |
1.380 |
| C06 |
C05 |
1.398 |
1.394 |
| C07 |
C01 |
1.390 |
1.385 |
| C05 |
C04 |
1.395 |
1.394 |
| C01 |
F02 |
1.328 |
1.351 |
| C01 |
C03 |
1.399 |
1.385 |
| C04 |
C03 |
1.389 |
1.379 |
| C03 |
H1 |
1.080 |
1.081 |
| C04 |
H2 |
1.080 |
1.080 |
| C06 |
H3 |
1.080 |
1.080 |
| C07 |
H4 |
1.080 |
1.080 |
| C11 |
H5 |
1.080 |
1.080 |
| C12 |
H6 |
1.079 |
1.080 |
| N14 |
H7 |
1.000 |
0.971 |
| C15 |
H8 |
1.100 |
1.089 |
| C15 |
H9 |
1.100 |
1.090 |
| C16 |
H10 |
1.100 |
1.090 |
| C16 |
H11 |
1.100 |
1.090 |
| C18 |
H13 |
1.100 |
1.090 |
| C18 |
H14 |
1.100 |
1.090 |
| C19 |
H15 |
1.100 |
1.091 |
| C19 |
H16 |
1.100 |
1.089 |
| N20 |
H17 |
1.000 |
1.009 |
| C21 |
H19 |
1.100 |
1.090 |
| C21 |
H20 |
1.100 |
1.091 |
| C22 |
H21 |
1.100 |
1.089 |
| C22 |
H22 |
1.100 |
1.090 |
| C24 |
H23 |
1.080 |
1.080 |
| C29 |
H24 |
1.080 |
1.080 |
| N30 |
H25 |
1.000 |
0.970 |
Bond Angles for 42U
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C21 |
N20 |
H17 |
108.9 |
111.0 |
| C22 |
C21 |
H19 |
108.4 |
109.5 |
| C22 |
C21 |
H20 |
108.4 |
109.5 |
| C21 |
C22 |
H21 |
107.4 |
109.5 |
| C21 |
C22 |
H22 |
107.4 |
109.5 |
| N20 |
C19 |
H15 |
108.6 |
109.5 |
| N20 |
C19 |
H16 |
108.6 |
109.6 |
| C19 |
C18 |
H13 |
108.2 |
109.5 |
| C19 |
C18 |
H14 |
108.1 |
109.5 |
| N17 |
C16 |
H10 |
109.4 |
109.4 |
| N17 |
C16 |
H11 |
109.4 |
109.5 |
| C16 |
C15 |
H8 |
107.6 |
109.5 |
| C16 |
C15 |
H9 |
107.6 |
109.5 |
| C15 |
N14 |
H7 |
103.8 |
120.0 |
| N14 |
C13 |
C23 |
127.6 |
120.0 |
| C12 |
C13 |
C23 |
111.1 |
120.1 |
| C13 |
C12 |
H6 |
117.8 |
120.0 |
| C12 |
C11 |
H5 |
117.4 |
120.0 |
| C13 |
C23 |
C25 |
118.6 |
119.9 |
| C13 |
C23 |
C24 |
122.4 |
120.0 |
| C11 |
C10 |
C24 |
110.8 |
119.9 |
| C24 |
C23 |
C25 |
119.0 |
120.0 |
| C23 |
C25 |
F26 |
114.8 |
109.4 |
| C23 |
C25 |
F27 |
115.9 |
109.5 |
| C10 |
C24 |
C23 |
126.1 |
120.0 |
| C23 |
C24 |
H23 |
117.0 |
120.0 |
| C10 |
C24 |
H23 |
116.9 |
120.0 |
| F26 |
C25 |
F27 |
104.8 |
109.5 |
| C29 |
N30 |
N31 |
112.8 |
108.4 |
| N30 |
C29 |
H24 |
125.4 |
126.1 |
| C29 |
N30 |
H25 |
123.6 |
125.8 |
| C09 |
C08 |
N31 |
109.5 |
107.8 |
| C08 |
N31 |
N30 |
105.5 |
108.5 |
| N31 |
N30 |
H25 |
123.6 |
125.8 |
| C07 |
C06 |
H3 |
117.8 |
120.0 |
| C06 |
C07 |
H4 |
119.9 |
119.9 |
| C05 |
C04 |
H2 |
117.9 |
120.0 |
| F02 |
C01 |
C03 |
121.4 |
119.9 |
| C01 |
C03 |
H1 |
120.1 |
119.9 |
| C04 |
C03 |
H1 |
120.1 |
119.9 |
| H8 |
C15 |
H9 |
109.4 |
109.5 |
| H10 |
C16 |
H11 |
109.4 |
109.5 |
| H13 |
C18 |
H14 |
109.5 |
109.5 |
| H15 |
C19 |
H16 |
109.4 |
109.5 |
| H19 |
C21 |
H20 |
109.5 |
109.5 |
| H21 |
C22 |
H22 |
109.5 |
109.5 |
Torsion Angles for 42U
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C21 |
N20 |
C19 |
H15 |
58.9 |
180.7 |
| C21 |
N20 |
C19 |
H16 |
177.8 |
60.7 |
| C22 |
C21 |
N20 |
H17 |
152.3 |
183.2 |
| H19 |
C21 |
C22 |
H20 |
118.7 |
120.1 |
| H21 |
C22 |
C21 |
H22 |
242.3 |
120.1 |
| N20 |
C19 |
C18 |
H13 |
155.3 |
298.5 |
| N20 |
C19 |
C18 |
H14 |
273.8 |
178.4 |
| H15 |
C19 |
N20 |
H16 |
241.1 |
120.1 |
| H13 |
C18 |
C19 |
H14 |
241.5 |
120.1 |
| C22 |
N17 |
C16 |
H10 |
175.4 |
306.2 |
| C22 |
N17 |
C16 |
H11 |
295.3 |
186.1 |
| C18 |
N17 |
C16 |
H10 |
296.1 |
70.0 |
| C18 |
N17 |
C16 |
H11 |
56.0 |
310.0 |
| N17 |
C16 |
C15 |
H8 |
258.1 |
60.0 |
| N17 |
C16 |
C15 |
H9 |
16.0 |
300.0 |
| H10 |
C16 |
N17 |
H11 |
240.1 |
120.0 |
| C16 |
C15 |
N14 |
H7 |
60.0 |
359.9 |
| H8 |
C15 |
C16 |
H9 |
242.1 |
120.0 |
| C15 |
N14 |
C13 |
C23 |
167.1 |
180.0 |
| C12 |
C13 |
N14 |
C23 |
180.0 |
179.9 |
| N14 |
C13 |
C12 |
H6 |
359.8 |
0.1 |
| N14 |
C13 |
C23 |
C25 |
359.4 |
359.9 |
| N14 |
C13 |
C23 |
C24 |
180.3 |
179.9 |
| N14 |
C13 |
C12 |
C23 |
180.0 |
180.1 |
| C13 |
C12 |
C11 |
H5 |
180.2 |
180.1 |
| C12 |
C13 |
C23 |
C25 |
179.4 |
180.0 |
| C12 |
C13 |
C23 |
C24 |
0.3 |
0.1 |
| C12 |
C11 |
C10 |
C24 |
359.8 |
0.1 |
| C23 |
C13 |
C12 |
H6 |
179.8 |
180.0 |
| C24 |
C23 |
C13 |
C25 |
180.9 |
180.0 |
| C13 |
C23 |
C25 |
F26 |
105.1 |
180.0 |
| C13 |
C23 |
C25 |
F27 |
227.7 |
300.0 |
| C10 |
C24 |
C23 |
C13 |
359.6 |
360.0 |
| C13 |
C23 |
C24 |
H23 |
179.6 |
180.2 |
| C11 |
C10 |
C24 |
C23 |
0.3 |
359.9 |
| C11 |
C10 |
C24 |
H23 |
180.3 |
179.7 |
| C13 |
C23 |
C25 |
C24 |
180.9 |
180.0 |
| C10 |
C24 |
C23 |
C25 |
180.5 |
180.0 |
| C25 |
C23 |
C24 |
H23 |
0.5 |
0.2 |
| F26 |
C25 |
C23 |
F27 |
237.5 |
240.0 |
| C13 |
C23 |
C24 |
C25 |
179.1 |
180.0 |
| C24 |
C23 |
C25 |
F26 |
284.3 |
0.0 |
| C24 |
C23 |
C25 |
F27 |
46.8 |
120.0 |
| C10 |
C24 |
C23 |
H23 |
180.0 |
179.8 |
| C13 |
C23 |
C24 |
C10 |
359.6 |
360.0 |
| C23 |
C24 |
C10 |
H23 |
180.0 |
180.2 |
| C10 |
C09 |
C08 |
N31 |
180.1 |
180.0 |
| C23 |
C25 |
F26 |
F27 |
128.3 |
120.0 |
| C23 |
C25 |
F27 |
F26 |
232.4 |
240.0 |
| C29 |
C09 |
C08 |
N31 |
0.2 |
0.0 |
| C08 |
N31 |
N30 |
C29 |
0.3 |
360.0 |
| N31 |
N30 |
C29 |
H25 |
180.0 |
180.0 |
| C09 |
C08 |
N31 |
N30 |
359.7 |
360.0 |
| N31 |
N30 |
C29 |
H24 |
179.9 |
180.0 |
| C29 |
N30 |
N31 |
H25 |
180.0 |
180.0 |
| C29 |
N30 |
N31 |
C08 |
0.3 |
360.0 |
| C08 |
N31 |
N30 |
H25 |
180.3 |
180.0 |
| C08 |
C05 |
C04 |
H2 |
359.9 |
0.0 |
| C06 |
C05 |
C04 |
H2 |
179.9 |
180.0 |
| C07 |
C01 |
C03 |
H1 |
179.9 |
180.2 |
| C05 |
C04 |
C03 |
H1 |
180.1 |
180.1 |
| F02 |
C01 |
C03 |
H1 |
359.9 |
360.0 |
| C04 |
C03 |
C01 |
H1 |
180.0 |
180.0 |
| C01 |
C03 |
C04 |
H1 |
180.0 |
180.0 |
| H2 |
C04 |
C03 |
H1 |
0.1 |
360.0 |
| H3 |
C06 |
C07 |
H4 |
0.0 |
359.5 |
| H4 |
C07 |
C06 |
H3 |
0.0 |
359.5 |
| H5 |
C11 |
C10 |
C24 |
179.8 |
180.0 |
| H6 |
C12 |
C13 |
C23 |
179.8 |
180.0 |
| H6 |
C12 |
C11 |
H5 |
0.2 |
0.1 |
| H7 |
N14 |
C13 |
C23 |
44.4 |
0.1 |
| C16 |
C15 |
H8 |
H9 |
116.7 |
240.0 |
| H8 |
C15 |
N14 |
H7 |
298.9 |
119.9 |
| C16 |
C15 |
H9 |
H8 |
243.3 |
120.0 |
| H9 |
C15 |
N14 |
H7 |
181.0 |
239.9 |
| N17 |
C16 |
H10 |
H11 |
119.8 |
240.0 |
| H10 |
C16 |
C15 |
H8 |
138.0 |
180.0 |
| H10 |
C16 |
C15 |
H9 |
255.9 |
60.0 |
| N17 |
C16 |
H11 |
H10 |
240.2 |
120.0 |
| H11 |
C16 |
C15 |
H8 |
18.2 |
300.0 |
| H11 |
C16 |
C15 |
H9 |
136.0 |
180.0 |
| C19 |
C18 |
H13 |
H14 |
117.6 |
239.9 |
| C19 |
C18 |
H14 |
H13 |
242.4 |
120.1 |
| N20 |
C19 |
H15 |
H16 |
118.4 |
239.9 |
| H15 |
C19 |
C18 |
H13 |
34.7 |
58.4 |
| H15 |
C19 |
C18 |
H14 |
153.2 |
298.3 |
| N20 |
C19 |
H16 |
H15 |
241.6 |
120.1 |
| H16 |
C19 |
C18 |
H13 |
275.8 |
178.4 |
| H16 |
C19 |
C18 |
H14 |
34.3 |
58.3 |
| H17 |
N20 |
C19 |
H15 |
298.6 |
56.9 |
| H17 |
N20 |
C19 |
H16 |
57.5 |
296.8 |
| H19 |
C21 |
N20 |
H17 |
273.0 |
303.2 |
| C22 |
C21 |
H19 |
H20 |
242.0 |
239.9 |
| H19 |
C21 |
C22 |
H21 |
23.9 |
61.7 |
| H19 |
C21 |
C22 |
H22 |
141.6 |
301.6 |
| H20 |
C21 |
N20 |
H17 |
31.7 |
63.2 |
| C22 |
C21 |
H20 |
H19 |
118.0 |
120.1 |
| H20 |
C21 |
C22 |
H21 |
265.2 |
301.6 |
| H20 |
C21 |
C22 |
H22 |
22.8 |
181.5 |
| H21 |
C22 |
C21 |
H19 |
23.9 |
61.7 |
| H21 |
C22 |
C21 |
H20 |
265.2 |
301.6 |
| C21 |
C22 |
H21 |
H22 |
116.3 |
240.0 |
| H22 |
C22 |
C21 |
H19 |
141.6 |
301.6 |
| H22 |
C22 |
C21 |
H20 |
22.8 |
181.5 |
| C21 |
C22 |
H22 |
H21 |
243.7 |
120.0 |
| H23 |
C24 |
C23 |
C25 |
0.5 |
0.2 |
| C10 |
C24 |
H23 |
C23 |
180.0 |
180.2 |
| H24 |
C29 |
N30 |
N31 |
179.9 |
180.0 |
| H24 |
C29 |
N30 |
H25 |
359.9 |
0.0 |
| C29 |
N30 |
H25 |
N31 |
180.0 |
180.0 |
| H25 |
N30 |
C29 |
H24 |
359.9 |
0.0 |