PDB Chemical Component 3X1
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 3X1
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C12 |
C11 |
1.513 |
1.530 |
| C11 |
C10 |
1.514 |
1.530 |
| C10 |
C9 |
1.511 |
1.529 |
| C9 |
C8 |
1.505 |
1.530 |
| C8 |
C7 |
1.504 |
1.529 |
| C7 |
C6 |
1.510 |
1.530 |
| C6 |
C5 |
1.511 |
1.530 |
| C5 |
C4 |
1.508 |
1.530 |
| C4 |
C3 |
1.501 |
1.507 |
| C2 |
C3 |
1.322 |
1.331 |
| C2 |
C1 |
1.474 |
1.469 |
| O2 |
C1 |
1.250 |
1.216 |
| C1 |
O1 |
1.248 |
1.347 |
| C2 |
H1 |
1.080 |
1.080 |
| C3 |
H2 |
1.080 |
1.081 |
| C4 |
H3 |
1.100 |
1.090 |
| C4 |
H4 |
1.100 |
1.091 |
| C5 |
H5 |
1.100 |
1.090 |
| C5 |
H6 |
1.100 |
1.090 |
| C6 |
H7 |
1.100 |
1.090 |
| C6 |
H8 |
1.100 |
1.091 |
| C8 |
H9 |
1.100 |
1.090 |
| C8 |
H10 |
1.100 |
1.090 |
| O1 |
H11 |
0.950 |
0.968 |
| C7 |
H12 |
1.100 |
1.090 |
| C7 |
H13 |
1.100 |
1.090 |
| C9 |
H14 |
1.100 |
1.090 |
| C9 |
H15 |
1.100 |
1.090 |
| C10 |
H16 |
1.100 |
1.090 |
| C10 |
H17 |
1.100 |
1.090 |
| C11 |
H18 |
1.100 |
1.090 |
| C11 |
H19 |
1.100 |
1.091 |
| C12 |
H20 |
1.099 |
1.090 |
| C12 |
H21 |
1.100 |
1.090 |
| C12 |
H22 |
1.100 |
1.090 |
Bond Angles for 3X1
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C12 |
C11 |
H18 |
108.3 |
109.5 |
| C12 |
C11 |
H19 |
108.3 |
109.4 |
| C11 |
C10 |
H16 |
109.7 |
109.5 |
| C11 |
C10 |
H17 |
109.7 |
109.5 |
| C10 |
C9 |
H14 |
109.5 |
109.5 |
| C10 |
C9 |
H15 |
109.6 |
109.5 |
| C9 |
C8 |
H9 |
109.1 |
109.4 |
| C9 |
C8 |
H10 |
109.1 |
109.4 |
| C7 |
C8 |
H9 |
109.1 |
109.5 |
| C7 |
C8 |
H10 |
109.1 |
109.5 |
| C8 |
C7 |
H12 |
109.0 |
109.5 |
| C8 |
C7 |
H13 |
109.0 |
109.5 |
| C7 |
C6 |
H7 |
109.9 |
109.5 |
| C7 |
C6 |
H8 |
109.9 |
109.5 |
| C6 |
C5 |
H5 |
108.8 |
109.5 |
| C6 |
C5 |
H6 |
108.8 |
109.4 |
| C5 |
C4 |
H3 |
109.9 |
109.5 |
| C5 |
C4 |
H4 |
109.9 |
109.5 |
| C4 |
C3 |
H2 |
120.0 |
120.0 |
| C3 |
C2 |
H1 |
120.2 |
120.0 |
| C2 |
C3 |
H2 |
120.0 |
120.0 |
| C2 |
C1 |
O1 |
119.3 |
120.0 |
| O2 |
C1 |
O1 |
121.2 |
120.0 |
| C1 |
O1 |
H11 |
109.5 |
117.0 |
| H3 |
C4 |
H4 |
109.5 |
109.4 |
| H5 |
C5 |
H6 |
109.5 |
109.5 |
| H7 |
C6 |
H8 |
109.4 |
109.4 |
| H9 |
C8 |
H10 |
109.5 |
109.5 |
| H12 |
C7 |
H13 |
109.5 |
109.5 |
| H14 |
C9 |
H15 |
109.5 |
109.5 |
| H16 |
C10 |
H17 |
109.5 |
109.5 |
| H18 |
C11 |
H19 |
109.5 |
109.4 |
| H20 |
C12 |
H21 |
109.4 |
109.5 |
| H20 |
C12 |
H22 |
109.5 |
109.5 |
| H21 |
C12 |
H22 |
109.5 |
109.5 |
Torsion Angles for 3X1
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C12 |
C11 |
C10 |
H16 |
334.9 |
60.0 |
| C12 |
C11 |
C10 |
H17 |
95.1 |
300.0 |
| H18 |
C11 |
C12 |
H19 |
241.3 |
119.9 |
| C11 |
C10 |
C9 |
H14 |
306.9 |
60.0 |
| C11 |
C10 |
C9 |
H15 |
67.0 |
300.0 |
| H16 |
C10 |
C11 |
H17 |
239.7 |
120.0 |
| C10 |
C9 |
C8 |
H9 |
15.8 |
59.9 |
| C10 |
C9 |
C8 |
H10 |
135.4 |
300.0 |
| H14 |
C9 |
C10 |
H15 |
239.9 |
120.0 |
| C7 |
C8 |
C9 |
H9 |
239.8 |
120.1 |
| C7 |
C8 |
C9 |
H10 |
120.2 |
240.0 |
| C9 |
C8 |
C7 |
H12 |
34.4 |
60.0 |
| C9 |
C8 |
C7 |
H13 |
153.9 |
300.0 |
| H9 |
C8 |
C9 |
H10 |
240.5 |
119.9 |
| C9 |
C8 |
C7 |
H9 |
120.2 |
240.0 |
| C9 |
C8 |
C7 |
H10 |
239.8 |
120.0 |
| C8 |
C7 |
C6 |
H7 |
318.6 |
60.0 |
| C8 |
C7 |
C6 |
H8 |
79.1 |
300.0 |
| H9 |
C8 |
C7 |
H10 |
119.5 |
240.0 |
| H12 |
C7 |
C8 |
H13 |
240.5 |
120.0 |
| C7 |
C6 |
C5 |
H5 |
291.1 |
60.0 |
| C7 |
C6 |
C5 |
H6 |
50.3 |
300.0 |
| H7 |
C6 |
C7 |
H8 |
239.5 |
120.0 |
| C6 |
C5 |
C4 |
H3 |
319.4 |
60.0 |
| C6 |
C5 |
C4 |
H4 |
79.9 |
300.0 |
| H5 |
C5 |
C6 |
H6 |
240.8 |
120.0 |
| C5 |
C4 |
C3 |
H2 |
270.9 |
305.1 |
| H3 |
C4 |
C5 |
H4 |
239.5 |
120.0 |
| C4 |
C3 |
C2 |
H1 |
0.0 |
0.0 |
| C2 |
C3 |
C4 |
H2 |
180.0 |
179.9 |
| C4 |
C3 |
C2 |
H2 |
180.0 |
180.1 |
| C3 |
C2 |
C1 |
O1 |
356.6 |
180.0 |
| O2 |
C1 |
C2 |
O1 |
180.4 |
180.3 |
| C2 |
C1 |
O1 |
H11 |
180.5 |
180.0 |
| C2 |
C1 |
O2 |
O1 |
179.6 |
179.7 |
| O2 |
C1 |
O1 |
H11 |
0.0 |
359.7 |
| H1 |
C2 |
C3 |
H2 |
180.1 |
179.9 |
| H1 |
C2 |
C1 |
O1 |
176.6 |
360.0 |
| H2 |
C3 |
C2 |
H1 |
180.1 |
179.9 |
| C5 |
C4 |
H3 |
H4 |
120.7 |
240.0 |
| H3 |
C4 |
C3 |
H2 |
151.1 |
65.1 |
| C5 |
C4 |
H4 |
H3 |
239.3 |
120.0 |
| H4 |
C4 |
C3 |
H2 |
30.6 |
185.0 |
| C6 |
C5 |
H5 |
H6 |
118.8 |
240.0 |
| H5 |
C5 |
C4 |
H3 |
199.0 |
180.0 |
| H5 |
C5 |
C4 |
H4 |
319.5 |
60.0 |
| C6 |
C5 |
H6 |
H5 |
241.2 |
120.0 |
| H6 |
C5 |
C4 |
H3 |
79.8 |
300.0 |
| H6 |
C5 |
C4 |
H4 |
200.3 |
180.0 |
| C7 |
C6 |
H7 |
H8 |
120.8 |
240.0 |
| H7 |
C6 |
C5 |
H5 |
171.3 |
180.0 |
| H7 |
C6 |
C5 |
H6 |
290.6 |
60.0 |
| C7 |
C6 |
H8 |
H7 |
239.2 |
120.0 |
| H8 |
C6 |
C5 |
H5 |
50.8 |
300.0 |
| H8 |
C6 |
C5 |
H6 |
170.1 |
180.0 |
| C9 |
C8 |
H9 |
H10 |
119.3 |
240.1 |
| C7 |
C8 |
H9 |
H10 |
240.7 |
120.0 |
| H9 |
C8 |
C7 |
H12 |
274.2 |
180.0 |
| H9 |
C8 |
C7 |
H13 |
33.6 |
60.0 |
| C9 |
C8 |
H10 |
H9 |
240.7 |
119.9 |
| C7 |
C8 |
H10 |
H9 |
119.3 |
239.9 |
| H10 |
C8 |
C7 |
H12 |
154.7 |
300.0 |
| H10 |
C8 |
C7 |
H13 |
274.1 |
180.0 |
| H12 |
C7 |
C8 |
H9 |
274.2 |
180.0 |
| H12 |
C7 |
C8 |
H10 |
154.7 |
300.0 |
| C8 |
C7 |
H12 |
H13 |
119.2 |
240.0 |
| H12 |
C7 |
C6 |
H7 |
198.3 |
180.0 |
| H12 |
C7 |
C6 |
H8 |
318.8 |
60.0 |
| H13 |
C7 |
C8 |
H9 |
33.6 |
60.0 |
| H13 |
C7 |
C8 |
H10 |
274.1 |
180.0 |
| C8 |
C7 |
H13 |
H12 |
240.8 |
120.0 |
| H13 |
C7 |
C6 |
H7 |
78.9 |
300.0 |
| H13 |
C7 |
C6 |
H8 |
199.4 |
180.0 |
| C10 |
C9 |
H14 |
H15 |
120.1 |
240.0 |
| H14 |
C9 |
C8 |
H9 |
255.9 |
180.0 |
| H14 |
C9 |
C8 |
H10 |
15.4 |
60.1 |
| C10 |
C9 |
H15 |
H14 |
239.9 |
120.1 |
| H15 |
C9 |
C8 |
H9 |
135.8 |
299.9 |
| H15 |
C9 |
C8 |
H10 |
255.3 |
180.0 |
| C11 |
C10 |
H16 |
H17 |
120.4 |
240.0 |
| H16 |
C10 |
C9 |
H14 |
187.0 |
180.0 |
| H16 |
C10 |
C9 |
H15 |
307.1 |
60.0 |
| C11 |
C10 |
H17 |
H16 |
239.6 |
120.0 |
| H17 |
C10 |
C9 |
H14 |
66.7 |
300.0 |
| H17 |
C10 |
C9 |
H15 |
186.8 |
180.0 |
| C12 |
C11 |
H18 |
H19 |
118.0 |
240.1 |
| H18 |
C11 |
C10 |
H16 |
214.2 |
180.0 |
| H18 |
C11 |
C10 |
H17 |
334.5 |
60.0 |
| C12 |
C11 |
H19 |
H18 |
242.0 |
120.0 |
| H19 |
C11 |
C10 |
H16 |
95.5 |
300.0 |
| H19 |
C11 |
C10 |
H17 |
215.8 |
180.0 |
| H20 |
C12 |
C11 |
H18 |
300.7 |
60.0 |
| H20 |
C12 |
C11 |
H19 |
59.4 |
300.0 |
| H21 |
C12 |
H20 |
H22 |
120.0 |
120.1 |
| H21 |
C12 |
C11 |
H18 |
60.6 |
180.0 |
| H21 |
C12 |
C11 |
H19 |
179.3 |
60.0 |
| H20 |
C12 |
H21 |
H22 |
240.0 |
239.9 |
| H22 |
C12 |
C11 |
H18 |
180.6 |
300.0 |
| H22 |
C12 |
C11 |
H19 |
299.3 |
180.0 |
| H20 |
C12 |
H22 |
H21 |
120.0 |
120.0 |