PDB Chemical Component 3U6
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 3U6
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C6 |
C5 |
1.390 |
1.365 |
| C6 |
C1 |
1.378 |
1.393 |
| C5 |
C4 |
1.400 |
1.400 |
| N1 |
C1 |
1.324 |
1.378 |
| N1 |
C7 |
1.339 |
1.363 |
| C1 |
C2 |
1.390 |
1.406 |
| N3 |
N2 |
1.248 |
1.262 |
| N3 |
C10 |
1.352 |
1.302 |
| C4 |
C10 |
1.386 |
1.478 |
| C4 |
C3 |
1.396 |
1.391 |
| N2 |
C11 |
1.344 |
1.303 |
| C7 |
C8 |
1.335 |
1.356 |
| C10 |
S1 |
1.718 |
1.765 |
| C2 |
C3 |
1.395 |
1.391 |
| C2 |
C8 |
1.393 |
1.473 |
| C8 |
C9 |
1.403 |
1.480 |
| C11 |
S1 |
1.641 |
1.765 |
| C11 |
N4 |
1.314 |
1.386 |
| C9 |
C12 |
1.399 |
1.392 |
| C9 |
N5 |
1.345 |
1.329 |
| C12 |
C13 |
1.391 |
1.385 |
| N5 |
C15 |
1.342 |
1.323 |
| C20 |
C16 |
1.536 |
1.549 |
| C20 |
C19 |
1.531 |
1.549 |
| C13 |
C14 |
1.393 |
1.385 |
| C15 |
C14 |
1.388 |
1.392 |
| C15 |
N6 |
1.331 |
1.390 |
| C16 |
N6 |
1.489 |
1.465 |
| C16 |
C17 |
1.534 |
1.543 |
| C19 |
C18 |
1.523 |
1.543 |
| C18 |
C17 |
1.513 |
1.538 |
| C17 |
H1 |
1.100 |
1.090 |
| C17 |
H2 |
1.100 |
1.090 |
| C18 |
H3 |
1.100 |
1.090 |
| C18 |
H4 |
1.100 |
1.091 |
| C19 |
H5 |
1.100 |
1.090 |
| C19 |
H6 |
1.100 |
1.089 |
| C20 |
H7 |
1.100 |
1.090 |
| C20 |
H8 |
1.100 |
1.091 |
| C16 |
H9 |
1.100 |
1.090 |
| N6 |
H10 |
1.000 |
0.970 |
| C14 |
H11 |
1.080 |
1.080 |
| C13 |
H12 |
1.080 |
1.080 |
| C12 |
H13 |
1.080 |
1.080 |
| C3 |
H14 |
1.080 |
1.080 |
| C7 |
H15 |
1.080 |
1.081 |
| N1 |
H16 |
1.000 |
0.969 |
| C6 |
H17 |
1.080 |
1.080 |
| C5 |
H18 |
1.081 |
1.080 |
| N4 |
H19 |
1.000 |
0.970 |
| N4 |
H20 |
1.000 |
0.970 |
Bond Angles for 3U6
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C6 |
C5 |
C4 |
120.7 |
120.7 |
| C5 |
C6 |
H17 |
120.3 |
119.9 |
| C6 |
C5 |
H18 |
119.6 |
119.6 |
| C5 |
C4 |
C10 |
118.1 |
120.0 |
| C4 |
C5 |
H18 |
119.6 |
119.7 |
| C1 |
N1 |
H16 |
125.3 |
124.9 |
| N1 |
C7 |
H15 |
125.4 |
125.0 |
| N3 |
N2 |
C11 |
114.9 |
117.7 |
| C4 |
C10 |
S1 |
125.3 |
126.1 |
| C4 |
C3 |
H14 |
120.3 |
120.3 |
| N2 |
C11 |
N4 |
126.4 |
126.1 |
| C2 |
C3 |
H14 |
120.3 |
120.3 |
| C11 |
N4 |
H19 |
109.5 |
120.0 |
| C11 |
N4 |
H20 |
109.5 |
120.0 |
| C9 |
C12 |
H13 |
120.1 |
120.4 |
| C12 |
C13 |
H12 |
120.3 |
120.7 |
| N5 |
C15 |
C14 |
120.8 |
120.7 |
| C20 |
C16 |
N6 |
111.2 |
110.5 |
| C16 |
C20 |
H7 |
110.4 |
110.8 |
| C16 |
C20 |
H8 |
110.4 |
110.8 |
| C20 |
C16 |
H9 |
110.1 |
110.5 |
| C20 |
C19 |
H5 |
110.9 |
110.5 |
| C20 |
C19 |
H6 |
110.9 |
110.7 |
| C13 |
C14 |
H11 |
120.7 |
120.4 |
| C15 |
C14 |
H11 |
120.7 |
120.3 |
| C15 |
N6 |
H10 |
105.9 |
120.0 |
| N6 |
C16 |
H9 |
110.7 |
110.4 |
| C16 |
N6 |
H10 |
105.9 |
120.0 |
| C16 |
C17 |
H1 |
110.8 |
110.0 |
| C16 |
C17 |
H2 |
110.8 |
110.0 |
| C19 |
C18 |
H3 |
111.4 |
110.0 |
| C19 |
C18 |
H4 |
111.4 |
110.1 |
| C18 |
C17 |
H1 |
110.8 |
110.0 |
| C18 |
C17 |
H2 |
110.8 |
110.0 |
| H1 |
C17 |
H2 |
109.5 |
110.1 |
| H3 |
C18 |
H4 |
109.5 |
110.0 |
| H5 |
C19 |
H6 |
109.5 |
110.4 |
| H7 |
C20 |
H8 |
109.4 |
110.8 |
| H19 |
N4 |
H20 |
109.5 |
120.0 |
Torsion Angles for 3U6
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C6 |
C5 |
C4 |
C10 |
178.4 |
180.0 |
| C4 |
C5 |
C6 |
H18 |
180.0 |
180.4 |
| C6 |
C1 |
N1 |
H16 |
359.8 |
360.0 |
| C4 |
C5 |
C6 |
H17 |
179.7 |
180.1 |
| C6 |
C5 |
C4 |
H18 |
180.0 |
179.6 |
| C5 |
C4 |
C10 |
S1 |
186.4 |
0.0 |
| C5 |
C4 |
C3 |
H14 |
179.0 |
180.4 |
| C1 |
N1 |
C7 |
H15 |
180.3 |
180.2 |
| C1 |
C2 |
C3 |
H14 |
180.4 |
180.0 |
| N3 |
N2 |
C11 |
N4 |
178.7 |
180.0 |
| C10 |
C4 |
C5 |
H18 |
358.4 |
0.4 |
| C10 |
C4 |
C3 |
H14 |
1.6 |
359.8 |
| C2 |
C3 |
C4 |
H14 |
180.0 |
180.0 |
| N2 |
C11 |
N4 |
H19 |
360.0 |
0.1 |
| N2 |
C11 |
N4 |
H20 |
120.0 |
179.9 |
| C4 |
C3 |
C2 |
H14 |
180.0 |
180.0 |
| C8 |
C9 |
C12 |
H13 |
358.9 |
0.5 |
| H19 |
N4 |
C11 |
H20 |
240.0 |
180.1 |
| C9 |
C12 |
C13 |
H12 |
179.1 |
180.5 |
| C12 |
C13 |
C14 |
H11 |
180.4 |
180.0 |
| N5 |
C15 |
C14 |
H11 |
180.0 |
179.7 |
| N5 |
C15 |
N6 |
H10 |
128.6 |
0.2 |
| C16 |
C20 |
C19 |
H5 |
146.3 |
203.4 |
| C16 |
C20 |
C19 |
H6 |
268.3 |
80.8 |
| N6 |
C16 |
C20 |
H9 |
237.0 |
237.5 |
| C20 |
C16 |
N6 |
H10 |
312.1 |
335.0 |
| C20 |
C16 |
C17 |
H1 |
94.3 |
217.2 |
| C20 |
C16 |
C17 |
H2 |
216.0 |
95.7 |
| H7 |
C20 |
C16 |
H8 |
238.8 |
123.4 |
| C20 |
C19 |
C18 |
H3 |
76.1 |
264.3 |
| C20 |
C19 |
C18 |
H4 |
198.6 |
143.0 |
| H5 |
C19 |
C20 |
H6 |
238.1 |
122.6 |
| C15 |
C14 |
C13 |
H11 |
180.0 |
180.0 |
| C13 |
C14 |
C15 |
H11 |
180.0 |
180.0 |
| C14 |
C15 |
N6 |
H10 |
309.7 |
180.0 |
| C15 |
N6 |
C16 |
H9 |
311.3 |
32.4 |
| C16 |
N6 |
C15 |
H10 |
238.1 |
180.0 |
| N6 |
C16 |
C20 |
H7 |
236.1 |
38.4 |
| N6 |
C16 |
C20 |
H8 |
357.3 |
274.9 |
| C20 |
C16 |
N6 |
H9 |
122.7 |
122.6 |
| C15 |
N6 |
C16 |
H10 |
121.9 |
180.0 |
| N6 |
C16 |
C17 |
H1 |
334.7 |
98.5 |
| N6 |
C16 |
C17 |
H2 |
96.4 |
337.0 |
| C18 |
C17 |
C16 |
H1 |
240.8 |
119.3 |
| C18 |
C17 |
C16 |
H2 |
119.2 |
240.8 |
| H1 |
C17 |
C16 |
H2 |
238.3 |
121.5 |
| C19 |
C18 |
C17 |
H1 |
282.6 |
119.2 |
| C19 |
C18 |
C17 |
H2 |
160.9 |
240.7 |
| H3 |
C18 |
C19 |
H4 |
237.5 |
121.3 |
| C16 |
C17 |
C18 |
H1 |
119.2 |
240.7 |
| C16 |
C17 |
C18 |
H2 |
240.8 |
119.2 |
| H1 |
C17 |
C18 |
H2 |
121.7 |
238.5 |
| C16 |
C17 |
H1 |
H2 |
122.5 |
238.6 |
| C18 |
C17 |
H1 |
H2 |
237.6 |
121.4 |
| C16 |
C17 |
H2 |
H1 |
237.5 |
121.4 |
| C18 |
C17 |
H2 |
H1 |
122.4 |
238.6 |
| C19 |
C18 |
H3 |
H4 |
123.6 |
238.6 |
| H3 |
C18 |
C17 |
H1 |
163.8 |
238.6 |
| H3 |
C18 |
C17 |
H2 |
42.1 |
0.0 |
| C19 |
C18 |
H4 |
H3 |
236.4 |
121.4 |
| H4 |
C18 |
C17 |
H1 |
41.3 |
359.9 |
| H4 |
C18 |
C17 |
H2 |
279.7 |
121.4 |
| C20 |
C19 |
H5 |
H6 |
122.8 |
237.2 |
| H5 |
C19 |
C18 |
H3 |
317.0 |
23.0 |
| H5 |
C19 |
C18 |
H4 |
79.5 |
261.7 |
| C20 |
C19 |
H6 |
H5 |
237.2 |
122.7 |
| H6 |
C19 |
C18 |
H3 |
195.1 |
145.5 |
| H6 |
C19 |
C18 |
H4 |
317.6 |
24.1 |
| H7 |
C20 |
C16 |
N6 |
236.1 |
38.4 |
| C16 |
C20 |
H7 |
H8 |
121.8 |
236.6 |
| H7 |
C20 |
C16 |
H9 |
359.1 |
160.9 |
| H7 |
C20 |
C19 |
H5 |
26.9 |
321.8 |
| H7 |
C20 |
C19 |
H6 |
148.9 |
199.2 |
| H8 |
C20 |
C16 |
N6 |
357.3 |
274.9 |
| C16 |
C20 |
H8 |
H7 |
238.2 |
123.5 |
| H8 |
C20 |
C16 |
H9 |
120.3 |
37.4 |
| H8 |
C20 |
C19 |
H5 |
265.7 |
85.1 |
| H8 |
C20 |
C19 |
H6 |
27.7 |
322.5 |
| C20 |
C16 |
H9 |
N6 |
236.7 |
237.5 |
| H9 |
C16 |
C20 |
H7 |
359.1 |
160.9 |
| H9 |
C16 |
C20 |
H8 |
120.3 |
37.4 |
| H9 |
C16 |
N6 |
H10 |
189.4 |
212.4 |
| H9 |
C16 |
C17 |
H1 |
212.9 |
335.9 |
| H9 |
C16 |
C17 |
H2 |
334.6 |
214.5 |
| H10 |
N6 |
C16 |
H9 |
189.4 |
212.4 |
| H12 |
C13 |
C14 |
H11 |
0.4 |
0.0 |
| H13 |
C12 |
C13 |
H12 |
359.1 |
0.0 |
| H16 |
N1 |
C7 |
H15 |
0.3 |
0.2 |
| H17 |
C6 |
C5 |
C4 |
179.7 |
180.1 |
| H17 |
C6 |
C5 |
H18 |
359.7 |
359.6 |
| C6 |
C5 |
H18 |
C4 |
180.0 |
180.4 |
| H18 |
C5 |
C6 |
H17 |
359.7 |
359.6 |
| H18 |
C5 |
C4 |
C10 |
358.4 |
0.4 |
| C11 |
N4 |
H19 |
H20 |
120.0 |
179.9 |
| C11 |
N4 |
H20 |
H19 |
239.9 |
180.1 |