PDB Chemical Component 3ST
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 3ST
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N23 |
C22 |
1.334 |
1.348 |
| C22 |
O24 |
1.219 |
1.213 |
| C22 |
C19 |
1.509 |
1.507 |
| C20 |
C19 |
1.517 |
1.531 |
| C20 |
C21 |
1.526 |
1.529 |
| C19 |
C18 |
1.517 |
1.531 |
| C18 |
C17 |
1.526 |
1.530 |
| C21 |
N16 |
1.469 |
1.469 |
| C27 |
N4 |
1.466 |
1.465 |
| N7 |
C8 |
1.368 |
1.309 |
| N7 |
C3 |
1.345 |
1.336 |
| C15 |
N16 |
1.458 |
1.469 |
| C15 |
C8 |
1.516 |
1.507 |
| N16 |
C17 |
1.470 |
1.468 |
| C8 |
N9 |
1.359 |
1.347 |
| N4 |
C3 |
1.337 |
1.385 |
| N4 |
C5 |
1.425 |
1.347 |
| C3 |
C2 |
1.455 |
1.388 |
| O26 |
C5 |
1.249 |
1.216 |
| C5 |
N6 |
1.423 |
1.345 |
| N9 |
C2 |
1.333 |
1.380 |
| N9 |
C10 |
1.466 |
1.465 |
| C2 |
C1 |
1.481 |
1.412 |
| C10 |
C11 |
1.529 |
1.530 |
| C12 |
C11 |
1.527 |
1.530 |
| C12 |
C13 |
1.525 |
1.531 |
| C12 |
C14 |
1.526 |
1.530 |
| N6 |
C1 |
1.412 |
1.350 |
| N6 |
C25 |
1.466 |
1.465 |
| C1 |
O28 |
1.248 |
1.218 |
| C10 |
H1 |
1.100 |
1.090 |
| C10 |
H2 |
1.100 |
1.090 |
| C11 |
H3 |
1.100 |
1.090 |
| C11 |
H4 |
1.100 |
1.090 |
| C13 |
H5 |
1.100 |
1.090 |
| C13 |
H6 |
1.100 |
1.089 |
| C13 |
H7 |
1.100 |
1.090 |
| C14 |
H8 |
1.100 |
1.091 |
| C14 |
H9 |
1.100 |
1.091 |
| C14 |
H10 |
1.100 |
1.089 |
| C15 |
H11 |
1.100 |
1.091 |
| C15 |
H12 |
1.100 |
1.089 |
| C17 |
H13 |
1.100 |
1.091 |
| C17 |
H14 |
1.100 |
1.090 |
| C18 |
H15 |
1.100 |
1.090 |
| C18 |
H16 |
1.100 |
1.090 |
| C20 |
H17 |
1.100 |
1.090 |
| C20 |
H18 |
1.100 |
1.091 |
| C21 |
H19 |
1.100 |
1.090 |
| C21 |
H20 |
1.100 |
1.090 |
| C25 |
H21 |
1.100 |
1.090 |
| C25 |
H22 |
1.100 |
1.090 |
| C25 |
H23 |
1.100 |
1.090 |
| C27 |
H24 |
1.100 |
1.089 |
| C27 |
H25 |
1.100 |
1.090 |
| C27 |
H26 |
1.100 |
1.089 |
| C12 |
H27 |
1.100 |
1.090 |
| C19 |
H29 |
1.100 |
1.090 |
| N23 |
H30 |
1.000 |
0.970 |
| N23 |
H31 |
1.000 |
0.969 |
Bond Angles for 3ST
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C19 |
C22 |
O24 |
118.5 |
120.0 |
| C20 |
C19 |
C22 |
112.9 |
109.5 |
| C22 |
C19 |
H29 |
108.7 |
109.5 |
| C21 |
C20 |
C19 |
105.1 |
109.3 |
| C19 |
C20 |
H17 |
110.6 |
109.5 |
| C19 |
C20 |
H18 |
110.5 |
109.5 |
| C20 |
C19 |
H29 |
108.6 |
109.5 |
| C20 |
C21 |
N16 |
111.7 |
109.5 |
| C21 |
C20 |
H17 |
110.6 |
109.5 |
| C21 |
C20 |
H18 |
110.5 |
109.5 |
| C20 |
C21 |
H19 |
108.9 |
109.5 |
| C20 |
C21 |
H20 |
108.9 |
109.5 |
| C19 |
C18 |
H15 |
110.5 |
109.5 |
| C19 |
C18 |
H16 |
110.5 |
109.5 |
| C18 |
C17 |
H13 |
109.0 |
109.4 |
| C18 |
C17 |
H14 |
109.0 |
109.5 |
| C15 |
N16 |
C21 |
115.1 |
111.0 |
| N16 |
C21 |
H19 |
108.9 |
109.5 |
| N16 |
C21 |
H20 |
108.9 |
109.4 |
| C15 |
N16 |
C17 |
115.6 |
111.0 |
| N16 |
C15 |
H11 |
109.2 |
109.4 |
| N16 |
C15 |
H12 |
109.3 |
109.5 |
| N16 |
C17 |
H13 |
109.0 |
109.5 |
| N16 |
C17 |
H14 |
109.0 |
109.4 |
| C8 |
N9 |
C10 |
126.8 |
126.5 |
| N9 |
C10 |
C11 |
111.7 |
109.5 |
| N9 |
C10 |
H1 |
108.9 |
109.4 |
| N9 |
C10 |
H2 |
108.9 |
109.4 |
| C2 |
C1 |
O28 |
122.3 |
120.4 |
| C11 |
C10 |
H1 |
108.9 |
109.5 |
| C11 |
C10 |
H2 |
108.9 |
109.5 |
| C10 |
C11 |
H3 |
108.5 |
109.5 |
| C10 |
C11 |
H4 |
108.5 |
109.5 |
| C12 |
C11 |
H3 |
108.5 |
109.5 |
| C12 |
C11 |
H4 |
108.5 |
109.4 |
| C12 |
C13 |
H5 |
109.5 |
109.4 |
| C12 |
C13 |
H6 |
109.5 |
109.4 |
| C12 |
C13 |
H7 |
109.5 |
109.5 |
| C12 |
C14 |
H8 |
109.5 |
109.4 |
| C12 |
C14 |
H9 |
109.5 |
109.5 |
| C12 |
C14 |
H10 |
109.5 |
109.5 |
| N6 |
C25 |
H21 |
109.5 |
109.5 |
| N6 |
C25 |
H22 |
109.5 |
109.4 |
| N6 |
C25 |
H23 |
109.5 |
109.5 |
| H1 |
C10 |
H2 |
109.4 |
109.5 |
| H3 |
C11 |
H4 |
109.5 |
109.5 |
| H5 |
C13 |
H6 |
109.5 |
109.5 |
| H5 |
C13 |
H7 |
109.5 |
109.4 |
| H6 |
C13 |
H7 |
109.4 |
109.5 |
| H8 |
C14 |
H9 |
109.5 |
109.4 |
| H8 |
C14 |
H10 |
109.5 |
109.5 |
| H9 |
C14 |
H10 |
109.5 |
109.5 |
| H11 |
C15 |
H12 |
109.5 |
109.4 |
| H13 |
C17 |
H14 |
109.4 |
109.4 |
| H15 |
C18 |
H16 |
109.4 |
109.5 |
| H17 |
C20 |
H18 |
109.5 |
109.5 |
| H19 |
C21 |
H20 |
109.5 |
109.4 |
| H21 |
C25 |
H22 |
109.4 |
109.5 |
| H21 |
C25 |
H23 |
109.5 |
109.5 |
| H22 |
C25 |
H23 |
109.5 |
109.5 |
| H24 |
C27 |
H25 |
109.5 |
109.5 |
| H24 |
C27 |
H26 |
109.5 |
109.5 |
| H25 |
C27 |
H26 |
109.5 |
109.4 |
| H30 |
N23 |
H31 |
120.0 |
120.1 |
Torsion Angles for 3ST
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N23 |
C22 |
C19 |
H29 |
215.9 |
59.9 |
| C20 |
C19 |
C22 |
O24 |
156.1 |
360.0 |
| O24 |
C22 |
C19 |
H29 |
35.5 |
239.9 |
| C21 |
C20 |
C19 |
C22 |
197.0 |
62.3 |
| C22 |
C19 |
C20 |
H17 |
316.3 |
302.3 |
| C22 |
C19 |
C20 |
H18 |
77.7 |
182.2 |
| C20 |
C19 |
C22 |
H29 |
120.5 |
120.1 |
| C22 |
C19 |
C18 |
H15 |
281.5 |
177.8 |
| C22 |
C19 |
C18 |
H16 |
42.8 |
57.7 |
| C22 |
C19 |
C20 |
H29 |
239.4 |
239.9 |
| C19 |
C20 |
C21 |
N16 |
308.5 |
59.2 |
| C21 |
C20 |
C19 |
H17 |
240.7 |
119.9 |
| C21 |
C20 |
C19 |
H18 |
119.3 |
240.0 |
| C19 |
C20 |
C21 |
H19 |
68.9 |
179.2 |
| C19 |
C20 |
C21 |
H20 |
188.2 |
299.2 |
| C20 |
C19 |
C18 |
H15 |
45.0 |
297.7 |
| C20 |
C19 |
C18 |
H16 |
166.3 |
177.6 |
| H17 |
C20 |
C19 |
H18 |
238.6 |
120.1 |
| C19 |
C20 |
C21 |
H17 |
119.3 |
240.0 |
| C19 |
C20 |
C21 |
H18 |
240.7 |
119.9 |
| C21 |
C20 |
C19 |
H29 |
317.6 |
182.4 |
| C15 |
N16 |
C21 |
C20 |
246.2 |
174.1 |
| N16 |
C21 |
C20 |
H19 |
239.7 |
240.0 |
| N16 |
C21 |
C20 |
H20 |
120.3 |
120.0 |
| H17 |
C20 |
C21 |
H18 |
121.4 |
239.9 |
| H19 |
C21 |
C20 |
H20 |
240.7 |
240.0 |
| C19 |
C18 |
C17 |
H13 |
172.2 |
60.9 |
| C19 |
C18 |
C17 |
H14 |
291.6 |
180.8 |
| H15 |
C18 |
C19 |
H16 |
238.7 |
120.1 |
| C15 |
N16 |
C17 |
C18 |
113.5 |
185.8 |
| N16 |
C17 |
C18 |
H13 |
239.7 |
240.0 |
| N16 |
C17 |
C18 |
H14 |
120.3 |
120.0 |
| H13 |
C17 |
C18 |
H14 |
240.6 |
240.1 |
| N16 |
C21 |
C20 |
C19 |
308.5 |
59.2 |
| N16 |
C21 |
C20 |
H17 |
189.2 |
179.1 |
| N16 |
C21 |
C20 |
H18 |
67.8 |
299.2 |
| C20 |
C21 |
N16 |
H19 |
120.4 |
120.1 |
| C20 |
C21 |
N16 |
H20 |
239.7 |
240.0 |
| C15 |
N16 |
C21 |
C17 |
211.4 |
235.9 |
| C21 |
N16 |
C15 |
H11 |
57.8 |
70.0 |
| C21 |
N16 |
C15 |
H12 |
177.5 |
310.0 |
| C21 |
N16 |
C17 |
H13 |
204.7 |
301.7 |
| C21 |
N16 |
C17 |
H14 |
85.3 |
181.8 |
| H19 |
C21 |
N16 |
H20 |
119.3 |
119.9 |
| C20 |
C21 |
N16 |
C15 |
246.2 |
174.1 |
| C15 |
N16 |
C21 |
H19 |
125.9 |
54.1 |
| C15 |
N16 |
C21 |
H20 |
6.6 |
294.1 |
| C15 |
N16 |
C17 |
H13 |
353.2 |
65.8 |
| C15 |
N16 |
C17 |
H14 |
233.8 |
305.9 |
| H11 |
C15 |
N16 |
H12 |
240.2 |
119.9 |
| C18 |
C17 |
N16 |
H13 |
120.3 |
120.0 |
| C18 |
C17 |
N16 |
H14 |
239.7 |
239.9 |
| C15 |
N16 |
C17 |
C21 |
148.5 |
124.1 |
| C17 |
N16 |
C15 |
H11 |
267.1 |
305.8 |
| C17 |
N16 |
C15 |
H12 |
26.8 |
185.8 |
| H13 |
C17 |
N16 |
H14 |
119.4 |
119.9 |
| C8 |
N9 |
C10 |
C11 |
129.1 |
90.0 |
| C8 |
N9 |
C10 |
H1 |
249.5 |
210.0 |
| C8 |
N9 |
C10 |
H2 |
8.8 |
330.0 |
| C3 |
C2 |
C1 |
O28 |
179.9 |
180.0 |
| C5 |
N6 |
C25 |
H21 |
180.0 |
270.0 |
| C5 |
N6 |
C25 |
H22 |
300.0 |
30.0 |
| C5 |
N6 |
C25 |
H23 |
60.0 |
150.0 |
| N9 |
C2 |
C1 |
O28 |
359.7 |
359.9 |
| C11 |
C10 |
N9 |
H1 |
239.6 |
240.0 |
| C11 |
C10 |
N9 |
H2 |
120.3 |
120.0 |
| N9 |
C10 |
C11 |
H3 |
351.4 |
300.0 |
| N9 |
C10 |
C11 |
H4 |
110.2 |
60.0 |
| H1 |
C10 |
N9 |
H2 |
240.7 |
240.0 |
| N9 |
C10 |
C11 |
H1 |
120.4 |
120.0 |
| N9 |
C10 |
C11 |
H2 |
239.6 |
240.0 |
| C12 |
C11 |
C10 |
H3 |
239.4 |
240.0 |
| C12 |
C11 |
C10 |
H4 |
120.6 |
120.0 |
| H1 |
C10 |
C11 |
H2 |
119.3 |
120.0 |
| H3 |
C11 |
C10 |
H4 |
241.2 |
240.0 |
| C12 |
C11 |
C10 |
H1 |
110.4 |
60.0 |
| C12 |
C11 |
C10 |
H2 |
351.2 |
300.0 |
| C10 |
C11 |
C12 |
H3 |
120.6 |
120.0 |
| C10 |
C11 |
C12 |
H4 |
239.4 |
240.0 |
| H3 |
C11 |
C12 |
H4 |
118.8 |
120.0 |
| C13 |
C12 |
C11 |
H3 |
195.5 |
305.0 |
| C13 |
C12 |
C11 |
H4 |
76.7 |
185.0 |
| H5 |
C13 |
C12 |
H6 |
240.0 |
240.0 |
| H5 |
C13 |
C12 |
H7 |
120.0 |
120.0 |
| H6 |
C13 |
C12 |
H7 |
240.0 |
240.0 |
| C14 |
C12 |
C11 |
H3 |
71.5 |
65.0 |
| C14 |
C12 |
C11 |
H4 |
312.6 |
305.0 |
| C14 |
C12 |
C13 |
H5 |
303.8 |
180.0 |
| C14 |
C12 |
C13 |
H6 |
63.8 |
300.0 |
| C14 |
C12 |
C13 |
H7 |
183.7 |
60.0 |
| H8 |
C14 |
C12 |
H9 |
240.0 |
240.1 |
| H8 |
C14 |
C12 |
H10 |
120.0 |
120.0 |
| H9 |
C14 |
C12 |
H10 |
240.0 |
239.9 |
| H21 |
C25 |
N6 |
H22 |
240.0 |
240.0 |
| H21 |
C25 |
N6 |
H23 |
120.0 |
120.0 |
| H22 |
C25 |
N6 |
H23 |
240.0 |
240.0 |
| N9 |
C10 |
H1 |
C11 |
237.9 |
240.0 |
| N9 |
C10 |
H1 |
H2 |
119.0 |
119.9 |
| C11 |
C10 |
H1 |
H2 |
241.1 |
240.0 |
| H1 |
C10 |
C11 |
H3 |
231.0 |
180.0 |
| H1 |
C10 |
C11 |
H4 |
349.8 |
300.0 |
| N9 |
C10 |
H2 |
C11 |
122.1 |
120.0 |
| N9 |
C10 |
H2 |
H1 |
241.0 |
240.1 |
| C11 |
C10 |
H2 |
H1 |
118.9 |
120.1 |
| H2 |
C10 |
C11 |
H3 |
111.8 |
60.0 |
| H2 |
C10 |
C11 |
H4 |
230.6 |
180.0 |
| H3 |
C11 |
C10 |
H1 |
231.0 |
180.0 |
| H3 |
C11 |
C10 |
H2 |
111.8 |
60.0 |
| C10 |
C11 |
H3 |
H4 |
118.2 |
120.0 |
| C12 |
C11 |
H3 |
H4 |
241.8 |
240.0 |
| H4 |
C11 |
C10 |
H1 |
349.8 |
300.0 |
| H4 |
C11 |
C10 |
H2 |
230.6 |
180.0 |
| C10 |
C11 |
H4 |
H3 |
241.8 |
240.0 |
| C12 |
C11 |
H4 |
H3 |
118.2 |
120.0 |
| C12 |
C13 |
H5 |
H6 |
120.0 |
120.0 |
| C12 |
C13 |
H5 |
H7 |
240.0 |
240.0 |
| H6 |
C13 |
H5 |
H7 |
120.0 |
120.1 |
| C12 |
C13 |
H6 |
H5 |
240.0 |
240.0 |
| C12 |
C13 |
H6 |
H7 |
120.0 |
120.0 |
| H5 |
C13 |
H6 |
H7 |
240.0 |
240.0 |
| C12 |
C13 |
H7 |
H5 |
120.0 |
120.0 |
| C12 |
C13 |
H7 |
H6 |
240.0 |
240.0 |
| H5 |
C13 |
H7 |
H6 |
120.0 |
120.0 |
| C12 |
C14 |
H8 |
H9 |
120.0 |
120.0 |
| C12 |
C14 |
H8 |
H10 |
240.0 |
240.0 |
| H9 |
C14 |
H8 |
H10 |
120.0 |
120.0 |
| C12 |
C14 |
H9 |
H8 |
240.0 |
240.1 |
| C12 |
C14 |
H9 |
H10 |
120.0 |
120.0 |
| H8 |
C14 |
H9 |
H10 |
240.0 |
240.0 |
| C12 |
C14 |
H10 |
H8 |
120.0 |
120.0 |
| C12 |
C14 |
H10 |
H9 |
240.0 |
240.0 |
| H8 |
C14 |
H10 |
H9 |
120.0 |
120.0 |
| H11 |
C15 |
N16 |
C21 |
57.8 |
70.0 |
| H11 |
C15 |
N16 |
C17 |
267.1 |
305.8 |
| N16 |
C15 |
H11 |
H12 |
119.6 |
240.0 |
| H12 |
C15 |
N16 |
C21 |
177.5 |
310.0 |
| H12 |
C15 |
N16 |
C17 |
26.8 |
185.8 |
| N16 |
C15 |
H12 |
H11 |
240.4 |
119.9 |
| C18 |
C17 |
H13 |
H14 |
119.2 |
120.0 |
| N16 |
C17 |
H13 |
H14 |
240.9 |
240.0 |
| C18 |
C17 |
H14 |
H13 |
240.9 |
240.1 |
| N16 |
C17 |
H14 |
H13 |
119.1 |
120.0 |
| C19 |
C18 |
H15 |
H16 |
122.0 |
239.9 |
| H15 |
C18 |
C17 |
H13 |
52.9 |
180.8 |
| H15 |
C18 |
C17 |
H14 |
172.3 |
300.7 |
| C19 |
C18 |
H16 |
H15 |
238.0 |
120.1 |
| H16 |
C18 |
C17 |
H13 |
291.5 |
300.9 |
| H16 |
C18 |
C17 |
H14 |
50.9 |
60.8 |
| H17 |
C20 |
C19 |
C22 |
316.3 |
302.3 |
| C21 |
C20 |
H17 |
C19 |
116.0 |
240.2 |
| C19 |
C20 |
H17 |
H18 |
122.0 |
239.9 |
| H17 |
C20 |
C19 |
H29 |
76.9 |
62.4 |
| H17 |
C20 |
C21 |
N16 |
189.2 |
179.1 |
| C21 |
C20 |
H17 |
H18 |
238.0 |
120.1 |
| H17 |
C20 |
C21 |
H19 |
309.6 |
299.2 |
| H17 |
C20 |
C21 |
H20 |
68.9 |
59.2 |
| H18 |
C20 |
C19 |
C22 |
77.7 |
182.2 |
| C21 |
C20 |
H18 |
C19 |
244.1 |
119.8 |
| C19 |
C20 |
H18 |
H17 |
238.0 |
120.1 |
| H18 |
C20 |
C19 |
H29 |
198.4 |
302.3 |
| H18 |
C20 |
C21 |
N16 |
67.8 |
299.2 |
| C21 |
C20 |
H18 |
H17 |
122.0 |
239.9 |
| H18 |
C20 |
C21 |
H19 |
188.2 |
59.3 |
| H18 |
C20 |
C21 |
H20 |
307.5 |
179.3 |
| H19 |
C21 |
C20 |
C19 |
68.9 |
179.2 |
| C20 |
C21 |
H19 |
N16 |
238.0 |
239.9 |
| H19 |
C21 |
C20 |
H17 |
309.6 |
299.2 |
| H19 |
C21 |
C20 |
H18 |
188.2 |
59.3 |
| C20 |
C21 |
H19 |
H20 |
119.0 |
120.0 |
| N16 |
C21 |
H19 |
H20 |
241.1 |
240.1 |
| H20 |
C21 |
C20 |
C19 |
188.2 |
299.2 |
| C20 |
C21 |
H20 |
N16 |
122.0 |
120.0 |
| H20 |
C21 |
C20 |
H17 |
68.9 |
59.2 |
| H20 |
C21 |
C20 |
H18 |
307.5 |
179.3 |
| C20 |
C21 |
H20 |
H19 |
241.0 |
240.0 |
| N16 |
C21 |
H20 |
H19 |
119.0 |
120.0 |
| N6 |
C25 |
H21 |
H22 |
120.0 |
119.9 |
| N6 |
C25 |
H21 |
H23 |
240.0 |
240.0 |
| H22 |
C25 |
H21 |
H23 |
120.0 |
120.1 |
| N6 |
C25 |
H22 |
H21 |
240.0 |
240.0 |
| N6 |
C25 |
H22 |
H23 |
120.0 |
120.0 |
| H21 |
C25 |
H22 |
H23 |
240.0 |
239.9 |
| N6 |
C25 |
H23 |
H21 |
120.0 |
120.0 |
| N6 |
C25 |
H23 |
H22 |
240.0 |
240.0 |
| H21 |
C25 |
H23 |
H22 |
119.9 |
120.0 |
| H25 |
C27 |
H24 |
H26 |
120.0 |
120.0 |
| H24 |
C27 |
H25 |
H26 |
240.0 |
240.0 |
| H24 |
C27 |
H26 |
H25 |
120.0 |
120.0 |
| H27 |
C12 |
C11 |
H3 |
314.2 |
185.1 |
| H27 |
C12 |
C11 |
H4 |
195.3 |
65.0 |
| H27 |
C12 |
C13 |
H5 |
61.4 |
60.0 |
| H27 |
C12 |
C13 |
H6 |
181.4 |
180.0 |
| H27 |
C12 |
C13 |
H7 |
301.4 |
300.0 |
| H27 |
C12 |
C14 |
H8 |
297.3 |
300.0 |
| H27 |
C12 |
C14 |
H9 |
57.3 |
59.9 |
| H27 |
C12 |
C14 |
H10 |
177.3 |
180.0 |
| H29 |
C19 |
C22 |
O24 |
35.5 |
239.9 |
| C20 |
C19 |
H29 |
C22 |
236.8 |
239.9 |
| H29 |
C19 |
C20 |
H17 |
76.9 |
62.4 |
| H29 |
C19 |
C20 |
H18 |
198.4 |
302.3 |
| H29 |
C19 |
C18 |
H15 |
161.3 |
57.7 |
| H29 |
C19 |
C18 |
H16 |
282.6 |
297.6 |