PDB Chemical Component 3RN
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 3RN
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C1 |
C5 |
1.523 |
1.514 |
| C1 |
O1 |
1.229 |
1.214 |
| C2 |
C1 |
1.391 |
1.459 |
| O2 |
C6 |
1.430 |
1.429 |
| O2 |
HO2 |
0.950 |
0.966 |
| C3 |
C2 |
1.335 |
1.324 |
| C3 |
C4 |
1.535 |
1.508 |
| C3 |
H3 |
1.080 |
1.081 |
| C4 |
C5 |
1.524 |
1.538 |
| C4 |
H4 |
1.100 |
1.090 |
| C5 |
H5 |
1.100 |
1.090 |
| C6 |
C2 |
1.530 |
1.508 |
| C6 |
H6 |
1.100 |
1.090 |
| C6 |
H6A |
1.101 |
1.090 |
| C4 |
H7 |
1.100 |
1.090 |
| C5 |
H8 |
1.100 |
1.090 |
Bond Angles for 3RN
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O1 |
C1 |
C5 |
124.1 |
126.3 |
| C2 |
C1 |
C5 |
111.8 |
107.5 |
| C1 |
C5 |
C4 |
102.4 |
104.1 |
| C1 |
C5 |
H5 |
111.9 |
110.5 |
| C1 |
C5 |
H8 |
111.9 |
110.4 |
| C6 |
O2 |
HO2 |
109.5 |
114.0 |
| O2 |
C6 |
H6 |
109.0 |
109.5 |
| O2 |
C6 |
H6A |
109.0 |
109.5 |
| C4 |
C3 |
H3 |
124.3 |
124.7 |
| C3 |
C4 |
C5 |
104.4 |
105.5 |
| C3 |
C4 |
H4 |
111.2 |
110.2 |
| C3 |
C4 |
H7 |
111.2 |
110.3 |
| C5 |
C4 |
H4 |
111.2 |
110.2 |
| C4 |
C5 |
H5 |
111.9 |
110.3 |
| C5 |
C4 |
H7 |
111.2 |
110.3 |
| C4 |
C5 |
H8 |
111.9 |
110.8 |
| H4 |
C4 |
H7 |
107.7 |
110.2 |
| H5 |
C5 |
H8 |
106.9 |
110.6 |
| H6 |
C6 |
H6A |
110.0 |
109.5 |
Torsion Angles for 3RN
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C3 |
C4 |
C5 |
C1 |
0.0 |
360.0 |
| C1 |
C5 |
C4 |
H4 |
240.0 |
241.0 |
| C4 |
C5 |
C1 |
H5 |
240.0 |
241.6 |
| C1 |
C5 |
C4 |
H7 |
120.1 |
119.1 |
| C4 |
C5 |
C1 |
H8 |
120.0 |
119.0 |
| H5 |
C5 |
C1 |
H8 |
240.0 |
237.4 |
| C2 |
C1 |
O1 |
C5 |
180.0 |
180.4 |
| O1 |
C1 |
C5 |
C4 |
180.0 |
180.3 |
| O1 |
C1 |
C5 |
H5 |
300.0 |
298.7 |
| O1 |
C1 |
C5 |
H8 |
60.0 |
61.4 |
| O1 |
C1 |
C2 |
C5 |
180.0 |
179.6 |
| C2 |
C1 |
C5 |
C4 |
360.0 |
360.0 |
| C2 |
C1 |
C5 |
H5 |
120.0 |
118.4 |
| C2 |
C1 |
C5 |
H8 |
240.0 |
241.0 |
| H6 |
C6 |
O2 |
H6A |
240.0 |
120.0 |
| HO2 |
O2 |
C6 |
H6 |
300.0 |
60.0 |
| HO2 |
O2 |
C6 |
H6A |
60.0 |
300.0 |
| C3 |
C2 |
C1 |
C5 |
360.0 |
0.0 |
| C1 |
C5 |
C4 |
C3 |
0.0 |
360.0 |
| C5 |
C4 |
C3 |
H4 |
240.0 |
241.0 |
| C3 |
C4 |
C5 |
H5 |
240.1 |
241.5 |
| C5 |
C4 |
C3 |
H7 |
120.0 |
119.1 |
| C3 |
C4 |
C5 |
H8 |
120.0 |
118.7 |
| H4 |
C4 |
C3 |
H7 |
240.0 |
238.1 |
| H3 |
C3 |
C4 |
C5 |
180.0 |
180.1 |
| H3 |
C3 |
C4 |
H4 |
299.9 |
299.1 |
| H3 |
C3 |
C4 |
H7 |
59.9 |
61.0 |
| C1 |
C5 |
C4 |
H5 |
120.0 |
118.5 |
| C1 |
C5 |
C4 |
H8 |
240.0 |
241.3 |
| C5 |
C4 |
C3 |
H3 |
180.0 |
180.1 |
| C3 |
C4 |
C5 |
H4 |
120.0 |
119.0 |
| C3 |
C4 |
C5 |
H7 |
240.0 |
240.9 |
| H4 |
C4 |
C5 |
H7 |
120.0 |
121.9 |
| H5 |
C5 |
C4 |
H8 |
120.0 |
122.7 |
| H4 |
C4 |
C3 |
H3 |
299.9 |
299.1 |
| C3 |
C4 |
H4 |
C5 |
244.1 |
243.9 |
| C3 |
C4 |
H4 |
H7 |
122.1 |
122.0 |
| H4 |
C4 |
C5 |
H5 |
120.1 |
122.5 |
| C5 |
C4 |
H4 |
H7 |
238.0 |
238.1 |
| H4 |
C4 |
C5 |
H8 |
0.0 |
359.7 |
| C1 |
C5 |
H5 |
C4 |
245.8 |
245.4 |
| C1 |
C5 |
H5 |
H8 |
122.9 |
122.6 |
| H5 |
C5 |
C4 |
H4 |
120.1 |
122.5 |
| H5 |
C5 |
C4 |
H7 |
0.1 |
0.5 |
| C4 |
C5 |
H5 |
H8 |
237.1 |
237.2 |
| H6 |
C6 |
O2 |
HO2 |
300.0 |
60.0 |
| O2 |
C6 |
H6 |
H6A |
119.4 |
240.0 |
| H6A |
C6 |
O2 |
HO2 |
60.0 |
300.0 |
| O2 |
C6 |
H6A |
H6 |
240.6 |
120.0 |
| H7 |
C4 |
C3 |
H3 |
59.9 |
61.0 |
| C3 |
C4 |
H7 |
C5 |
115.9 |
116.2 |
| C3 |
C4 |
H7 |
H4 |
237.9 |
238.1 |
| C5 |
C4 |
H7 |
H4 |
122.0 |
121.9 |
| H7 |
C4 |
C5 |
H5 |
0.1 |
0.5 |
| H7 |
C4 |
C5 |
H8 |
240.1 |
237.8 |
| C1 |
C5 |
H8 |
C4 |
114.2 |
114.9 |
| C1 |
C5 |
H8 |
H5 |
237.1 |
237.4 |
| H8 |
C5 |
C4 |
H4 |
0.0 |
359.7 |
| C4 |
C5 |
H8 |
H5 |
122.9 |
122.5 |
| H8 |
C5 |
C4 |
H7 |
240.1 |
237.8 |