PDB Chemical Component 3R5
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 3R5
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C2 |
C1 |
1.460 |
1.468 |
C1 |
O18 |
1.296 |
1.212 |
C1 |
H1 |
1.080 |
1.081 |
C7 |
C2 |
1.426 |
1.400 |
C3 |
C2 |
1.460 |
1.404 |
C4 |
C3 |
1.479 |
1.385 |
C3 |
O10 |
1.411 |
1.357 |
C5 |
C4 |
1.464 |
1.381 |
C4 |
H4 |
1.080 |
1.080 |
C5 |
C6 |
1.489 |
1.389 |
C5 |
H5 |
1.080 |
1.080 |
O8 |
C6 |
1.432 |
1.360 |
C6 |
C7 |
1.469 |
1.382 |
C7 |
H7 |
1.080 |
1.080 |
O8 |
C9 |
1.458 |
1.430 |
C9 |
H9 |
1.100 |
1.090 |
C9 |
H9A |
1.100 |
1.090 |
C9 |
H9B |
1.100 |
1.090 |
C11 |
O10 |
1.459 |
1.429 |
C11 |
C12 |
1.514 |
1.507 |
C11 |
H11 |
1.100 |
1.091 |
C11 |
H11A |
1.100 |
1.090 |
C12 |
C17 |
1.437 |
1.386 |
C12 |
C13 |
1.469 |
1.382 |
C13 |
N14 |
1.441 |
1.319 |
C13 |
H13 |
1.080 |
1.080 |
N14 |
C15 |
1.415 |
1.319 |
C16 |
C15 |
1.422 |
1.382 |
C15 |
H15 |
1.080 |
1.079 |
C17 |
C16 |
1.438 |
1.387 |
C16 |
H16 |
1.080 |
1.079 |
C17 |
H17 |
1.080 |
1.081 |
Bond Angles for 3R5
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
O18 |
121.0 |
120.1 |
C2 |
C1 |
H1 |
119.5 |
119.9 |
O18 |
C1 |
H1 |
119.5 |
120.0 |
C4 |
C3 |
O10 |
125.7 |
120.1 |
C5 |
C4 |
H4 |
119.8 |
119.9 |
C6 |
C5 |
H5 |
120.4 |
119.8 |
C5 |
C6 |
C7 |
119.1 |
120.2 |
C6 |
C7 |
H7 |
119.5 |
120.0 |
O8 |
C9 |
H9 |
109.5 |
109.5 |
O8 |
C9 |
H9A |
109.5 |
109.4 |
O8 |
C9 |
H9B |
109.4 |
109.4 |
H9 |
C9 |
H9A |
109.5 |
109.5 |
H9 |
C9 |
H9B |
109.5 |
109.5 |
H9A |
C9 |
H9B |
109.5 |
109.5 |
C12 |
C11 |
H11 |
111.6 |
109.5 |
C12 |
C11 |
H11A |
111.6 |
109.5 |
C11 |
C12 |
C17 |
119.0 |
120.4 |
C11 |
C12 |
C13 |
119.5 |
120.4 |
H11 |
C11 |
H11A |
107.3 |
109.5 |
C13 |
C12 |
C17 |
121.5 |
119.2 |
C12 |
C17 |
C16 |
118.2 |
118.4 |
C12 |
C17 |
H17 |
120.9 |
120.8 |
C12 |
C13 |
N14 |
118.3 |
120.8 |
C12 |
C13 |
H13 |
120.9 |
119.7 |
N14 |
C13 |
H13 |
120.9 |
119.6 |
C13 |
N14 |
C15 |
119.4 |
121.7 |
N14 |
C15 |
H15 |
118.8 |
119.7 |
C16 |
C15 |
H15 |
118.8 |
119.6 |
C17 |
C16 |
H16 |
119.9 |
120.4 |
Torsion Angles for 3R5
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O18 |
C1 |
C2 |
H1 |
180.0 |
180.3 |
C2 |
C1 |
O18 |
H1 |
180.0 |
179.7 |
C2 |
C1 |
H1 |
O18 |
180.0 |
180.3 |
C7 |
C2 |
C1 |
O18 |
359.9 |
359.7 |
C7 |
C2 |
C1 |
H1 |
179.9 |
179.5 |
C3 |
C2 |
C1 |
O18 |
181.5 |
180.0 |
C3 |
C2 |
C1 |
H1 |
1.5 |
359.7 |
C5 |
C4 |
C3 |
O10 |
182.0 |
180.0 |
H4 |
C4 |
C3 |
O10 |
2.0 |
360.0 |
C6 |
C5 |
C4 |
H4 |
182.3 |
180.0 |
C5 |
C6 |
C7 |
H7 |
181.9 |
179.9 |
H5 |
C5 |
C4 |
H4 |
2.3 |
0.0 |
H5 |
C5 |
C6 |
C7 |
177.6 |
179.8 |
O8 |
C6 |
C5 |
H5 |
0.4 |
359.9 |
O8 |
C6 |
C7 |
H7 |
359.0 |
359.8 |
C7 |
C6 |
C5 |
H5 |
177.6 |
179.8 |
H9 |
C9 |
O8 |
H9A |
240.0 |
240.0 |
H9 |
C9 |
O8 |
H9B |
120.0 |
120.0 |
H9A |
C9 |
O8 |
H9B |
240.0 |
240.0 |
O8 |
C9 |
H9 |
H9A |
120.0 |
119.9 |
O8 |
C9 |
H9 |
H9B |
240.0 |
240.0 |
H9A |
C9 |
H9 |
H9B |
120.0 |
120.1 |
O8 |
C9 |
H9A |
H9 |
240.0 |
240.0 |
O8 |
C9 |
H9A |
H9B |
120.0 |
120.0 |
H9 |
C9 |
H9A |
H9B |
240.0 |
239.9 |
O8 |
C9 |
H9B |
H9 |
120.0 |
120.0 |
O8 |
C9 |
H9B |
H9A |
240.0 |
240.0 |
H9 |
C9 |
H9B |
H9A |
120.0 |
120.0 |
H11 |
C11 |
C12 |
H11A |
120.0 |
120.0 |
C13 |
C12 |
C11 |
C17 |
178.9 |
180.3 |
C11 |
C12 |
C17 |
C16 |
179.3 |
179.8 |
C11 |
C12 |
C17 |
H17 |
359.4 |
360.0 |
C11 |
C12 |
C13 |
N14 |
180.7 |
180.0 |
C11 |
C12 |
C13 |
H13 |
0.7 |
359.9 |
C12 |
C11 |
H11 |
H11A |
237.5 |
240.0 |
H11 |
C11 |
C12 |
C17 |
144.3 |
330.0 |
H11 |
C11 |
C12 |
C13 |
323.1 |
150.3 |
C12 |
C11 |
H11A |
H11 |
122.5 |
120.0 |
H11A |
C11 |
C12 |
C17 |
24.3 |
210.0 |
H11A |
C11 |
C12 |
C13 |
203.1 |
30.3 |
C17 |
C12 |
C11 |
H11 |
144.3 |
330.0 |
C17 |
C12 |
C11 |
H11A |
24.3 |
210.0 |
C11 |
C12 |
C17 |
C13 |
178.8 |
180.3 |
C17 |
C12 |
C13 |
N14 |
359.5 |
0.3 |
C17 |
C12 |
C13 |
H13 |
179.5 |
180.2 |
C12 |
C17 |
C16 |
H16 |
179.8 |
180.3 |
C13 |
C12 |
C11 |
H11 |
323.1 |
150.3 |
C13 |
C12 |
C11 |
H11A |
203.1 |
30.3 |
C11 |
C12 |
C13 |
C17 |
181.2 |
179.7 |
C13 |
C12 |
C17 |
C16 |
0.5 |
359.5 |
C13 |
C12 |
C17 |
H17 |
180.5 |
179.7 |
N14 |
C13 |
C12 |
H13 |
180.0 |
180.0 |
C12 |
C13 |
N14 |
C15 |
0.2 |
0.0 |
N14 |
C13 |
C12 |
C17 |
359.5 |
0.3 |
C12 |
C13 |
N14 |
H13 |
180.0 |
180.0 |
C13 |
N14 |
C15 |
H15 |
180.1 |
180.0 |
H13 |
C13 |
C12 |
C17 |
179.5 |
180.2 |
C12 |
C13 |
H13 |
N14 |
180.0 |
180.0 |
H13 |
C13 |
N14 |
C15 |
180.2 |
180.1 |
C15 |
N14 |
C13 |
H13 |
180.2 |
180.1 |
C16 |
C15 |
N14 |
H15 |
180.0 |
179.9 |
C12 |
C17 |
C16 |
C15 |
359.8 |
0.4 |
N14 |
C15 |
C16 |
H15 |
180.0 |
180.1 |
C12 |
C17 |
C16 |
H17 |
180.0 |
180.2 |
C17 |
C16 |
C15 |
H15 |
179.9 |
179.7 |
H16 |
C16 |
C15 |
H15 |
360.0 |
359.9 |
C12 |
C17 |
H17 |
C16 |
180.0 |
179.8 |
H17 |
C17 |
C16 |
H16 |
359.7 |
0.1 |