PDB Chemical Component 3QY
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 3QY
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N26 |
N28 |
1.398 |
1.400 |
N26 |
C25 |
1.348 |
1.348 |
N28 |
C29 |
1.306 |
1.306 |
C25 |
C24 |
1.366 |
1.366 |
C29 |
C24 |
1.410 |
1.410 |
C24 |
C21 |
1.482 |
1.480 |
C21 |
C20 |
1.362 |
1.356 |
C21 |
N22 |
1.374 |
1.377 |
C20 |
C19 |
1.467 |
1.462 |
N22 |
C18 |
1.371 |
1.374 |
C19 |
C18 |
1.420 |
1.412 |
C19 |
C30 |
1.404 |
1.394 |
C18 |
C17 |
1.393 |
1.390 |
C30 |
N31 |
1.331 |
1.317 |
C17 |
C16 |
1.391 |
1.386 |
N31 |
C16 |
1.339 |
1.328 |
C1 |
O2 |
1.442 |
1.428 |
C16 |
N15 |
1.406 |
1.395 |
C4 |
C5 |
1.538 |
1.531 |
C4 |
C3 |
1.546 |
1.531 |
O2 |
C3 |
1.444 |
1.429 |
C5 |
N6 |
1.482 |
1.468 |
C3 |
C8 |
1.547 |
1.532 |
N15 |
C13 |
1.403 |
1.386 |
N14 |
C13 |
1.343 |
1.329 |
N14 |
C9 |
1.339 |
1.324 |
N6 |
C9 |
1.400 |
1.383 |
N6 |
C7 |
1.483 |
1.469 |
C8 |
C7 |
1.540 |
1.531 |
C13 |
C12 |
1.408 |
1.397 |
C9 |
N10 |
1.341 |
1.325 |
C12 |
C11 |
1.389 |
1.381 |
N10 |
C11 |
1.336 |
1.326 |
C4 |
H1 |
1.100 |
1.090 |
C4 |
H2 |
1.100 |
1.090 |
C5 |
H3 |
1.100 |
1.090 |
C5 |
H4 |
1.100 |
1.089 |
C11 |
H5 |
1.080 |
1.080 |
C7 |
H6 |
1.101 |
1.090 |
C7 |
H7 |
1.100 |
1.090 |
C8 |
H8 |
1.100 |
1.090 |
C8 |
H9 |
1.100 |
1.090 |
C12 |
H10 |
1.080 |
1.080 |
C3 |
H11 |
1.100 |
1.090 |
C1 |
H12 |
1.100 |
1.090 |
C1 |
H13 |
1.100 |
1.090 |
C1 |
H14 |
1.100 |
1.090 |
N15 |
H15 |
1.000 |
0.970 |
C17 |
H16 |
1.080 |
1.080 |
C20 |
H17 |
1.080 |
1.080 |
N22 |
H18 |
1.000 |
0.970 |
C25 |
H19 |
1.080 |
1.080 |
N26 |
H20 |
1.000 |
0.970 |
C29 |
H21 |
1.080 |
1.080 |
C30 |
H22 |
1.080 |
1.080 |
Bond Angles for 3QY
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
N26 |
N28 |
C29 |
108.3 |
108.6 |
N28 |
N26 |
H20 |
125.8 |
125.9 |
N26 |
C25 |
H19 |
126.1 |
126.2 |
N28 |
C29 |
H21 |
125.8 |
125.9 |
C21 |
C20 |
H17 |
126.5 |
126.5 |
C21 |
N22 |
H18 |
124.9 |
125.1 |
C20 |
C19 |
C30 |
136.1 |
134.6 |
C19 |
C30 |
N31 |
120.2 |
120.3 |
C19 |
C30 |
H22 |
119.9 |
119.9 |
C18 |
C17 |
H16 |
120.2 |
120.6 |
N31 |
C30 |
H22 |
119.9 |
119.9 |
O2 |
C1 |
H12 |
109.5 |
109.5 |
O2 |
C1 |
H13 |
109.5 |
109.5 |
O2 |
C1 |
H14 |
109.5 |
109.5 |
C16 |
N15 |
H15 |
115.9 |
120.0 |
C5 |
C4 |
C3 |
110.5 |
109.3 |
C4 |
C5 |
N6 |
110.8 |
109.5 |
C5 |
C4 |
H1 |
109.2 |
109.5 |
C5 |
C4 |
H2 |
109.2 |
109.5 |
C4 |
C5 |
H3 |
109.2 |
109.4 |
C4 |
C5 |
H4 |
109.2 |
109.5 |
C4 |
C3 |
C8 |
114.1 |
109.1 |
C3 |
C4 |
H1 |
109.2 |
109.5 |
C3 |
C4 |
H2 |
109.2 |
109.5 |
C4 |
C3 |
H11 |
103.6 |
109.5 |
O2 |
C3 |
H11 |
104.5 |
109.6 |
C5 |
N6 |
C9 |
113.0 |
111.0 |
C5 |
N6 |
C7 |
112.6 |
111.2 |
N6 |
C5 |
H3 |
109.2 |
109.5 |
N6 |
C5 |
H4 |
109.2 |
109.5 |
C3 |
C8 |
H8 |
109.2 |
109.5 |
C3 |
C8 |
H9 |
109.2 |
109.5 |
N6 |
C9 |
N10 |
121.5 |
119.2 |
N6 |
C7 |
H6 |
109.2 |
109.5 |
N6 |
C7 |
H7 |
109.2 |
109.5 |
C8 |
C7 |
H6 |
109.2 |
109.5 |
C8 |
C7 |
H7 |
109.2 |
109.5 |
C13 |
C12 |
H10 |
120.7 |
120.7 |
C12 |
C11 |
H5 |
120.3 |
120.3 |
N10 |
C11 |
H5 |
120.3 |
120.3 |
H1 |
C4 |
H2 |
109.5 |
109.5 |
H3 |
C5 |
H4 |
109.4 |
109.4 |
H6 |
C7 |
H7 |
109.4 |
109.5 |
H8 |
C8 |
H9 |
109.4 |
109.5 |
H12 |
C1 |
H13 |
109.5 |
109.5 |
H12 |
C1 |
H14 |
109.4 |
109.5 |
H13 |
C1 |
H14 |
109.5 |
109.5 |
Torsion Angles for 3QY
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
N28 |
N26 |
C25 |
H19 |
180.1 |
180.1 |
N26 |
N28 |
C29 |
H21 |
181.3 |
180.1 |
C29 |
N28 |
N26 |
H20 |
179.1 |
180.0 |
C24 |
C21 |
C20 |
H17 |
2.1 |
360.0 |
C24 |
C21 |
N22 |
H18 |
358.5 |
360.0 |
C21 |
C20 |
C19 |
C30 |
181.0 |
180.0 |
N22 |
C21 |
C20 |
H17 |
180.2 |
180.0 |
C20 |
C19 |
C30 |
N31 |
180.3 |
179.6 |
C20 |
C19 |
C30 |
H22 |
0.4 |
360.0 |
N22 |
C18 |
C17 |
H16 |
358.8 |
0.0 |
C19 |
C18 |
C17 |
H16 |
179.2 |
180.1 |
N31 |
C30 |
C19 |
H22 |
180.0 |
179.6 |
C19 |
C30 |
N31 |
H22 |
180.0 |
180.4 |
C17 |
C16 |
N15 |
H15 |
187.2 |
5.2 |
N31 |
C16 |
N15 |
H15 |
5.7 |
184.9 |
C1 |
O2 |
C3 |
H11 |
181.5 |
29.8 |
H12 |
C1 |
O2 |
H13 |
240.0 |
240.0 |
H12 |
C1 |
O2 |
H14 |
120.0 |
120.0 |
H13 |
C1 |
O2 |
H14 |
240.0 |
240.0 |
C5 |
C4 |
C3 |
C8 |
48.7 |
57.6 |
C3 |
C4 |
C5 |
H1 |
239.8 |
240.0 |
C3 |
C4 |
C5 |
H2 |
120.2 |
120.0 |
C5 |
C4 |
C3 |
H11 |
296.9 |
297.8 |
C4 |
C5 |
N6 |
C9 |
194.4 |
185.8 |
C4 |
C5 |
N6 |
C7 |
61.1 |
61.7 |
N6 |
C5 |
C4 |
H3 |
239.8 |
240.0 |
N6 |
C5 |
C4 |
H4 |
120.2 |
120.1 |
H1 |
C4 |
C5 |
H2 |
240.3 |
239.9 |
H3 |
C5 |
C4 |
H4 |
240.4 |
240.0 |
C3 |
C4 |
C5 |
N6 |
306.8 |
300.8 |
C5 |
C4 |
C3 |
H1 |
120.1 |
119.9 |
C5 |
C4 |
C3 |
H2 |
239.9 |
240.0 |
C3 |
C4 |
C5 |
H3 |
67.0 |
60.8 |
C3 |
C4 |
C5 |
H4 |
186.6 |
180.8 |
O2 |
C3 |
C4 |
H11 |
246.9 |
239.7 |
C4 |
C3 |
C8 |
H8 |
71.3 |
182.4 |
C4 |
C3 |
C8 |
H9 |
191.0 |
62.3 |
H1 |
C4 |
C3 |
H2 |
119.7 |
120.1 |
O2 |
C3 |
C4 |
H1 |
63.6 |
57.6 |
O2 |
C3 |
C4 |
H2 |
303.9 |
297.5 |
C4 |
C3 |
O2 |
H11 |
112.6 |
120.2 |
O2 |
C3 |
C8 |
H8 |
296.4 |
62.5 |
O2 |
C3 |
C8 |
H9 |
56.1 |
302.4 |
N6 |
C5 |
C4 |
C3 |
306.8 |
300.8 |
N6 |
C5 |
C4 |
H1 |
66.9 |
60.8 |
N6 |
C5 |
C4 |
H2 |
186.6 |
180.9 |
C4 |
C5 |
N6 |
H3 |
120.2 |
120.0 |
C4 |
C5 |
N6 |
H4 |
239.8 |
240.0 |
C5 |
N6 |
C9 |
N10 |
245.6 |
0.0 |
C5 |
N6 |
C7 |
H6 |
59.1 |
178.2 |
C5 |
N6 |
C7 |
H7 |
178.7 |
58.2 |
H3 |
C5 |
N6 |
H4 |
119.6 |
120.0 |
C8 |
C3 |
C4 |
H1 |
288.6 |
297.7 |
C8 |
C3 |
C4 |
H2 |
168.8 |
177.6 |
C4 |
C3 |
C8 |
H11 |
248.2 |
240.1 |
C3 |
C8 |
C7 |
H6 |
293.2 |
179.2 |
C3 |
C8 |
C7 |
H7 |
173.5 |
299.2 |
H8 |
C8 |
C3 |
H9 |
240.4 |
120.1 |
N15 |
C13 |
C12 |
H10 |
0.2 |
0.0 |
N14 |
C13 |
C12 |
H10 |
180.6 |
180.0 |
C5 |
N6 |
C9 |
C7 |
228.2 |
235.8 |
C9 |
N6 |
C5 |
H3 |
74.2 |
65.8 |
C9 |
N6 |
C5 |
H4 |
314.7 |
305.8 |
C9 |
N6 |
C7 |
H6 |
287.1 |
54.2 |
C9 |
N6 |
C7 |
H7 |
46.7 |
294.2 |
C5 |
N6 |
C7 |
C9 |
132.0 |
124.1 |
C7 |
N6 |
C5 |
H3 |
300.9 |
301.8 |
C7 |
N6 |
C5 |
H4 |
181.4 |
181.8 |
C8 |
C7 |
N6 |
H6 |
239.8 |
120.0 |
C8 |
C7 |
N6 |
H7 |
120.2 |
240.0 |
H6 |
C7 |
N6 |
H7 |
240.3 |
120.0 |
C4 |
C3 |
C8 |
C7 |
311.2 |
302.3 |
C5 |
N6 |
C7 |
C8 |
298.9 |
298.2 |
N6 |
C7 |
C8 |
H6 |
120.2 |
240.0 |
N6 |
C7 |
C8 |
H7 |
239.8 |
120.0 |
H6 |
C7 |
C8 |
H7 |
119.7 |
240.0 |
C13 |
C12 |
C11 |
H5 |
180.4 |
180.0 |
C9 |
N10 |
C11 |
H5 |
179.4 |
180.0 |
N10 |
C11 |
C12 |
H5 |
180.0 |
180.2 |
C12 |
C11 |
N10 |
H5 |
180.0 |
179.8 |
C5 |
C4 |
H1 |
C3 |
239.1 |
240.2 |
H1 |
C4 |
C5 |
N6 |
66.9 |
60.8 |
C5 |
C4 |
H1 |
H2 |
119.5 |
120.1 |
H1 |
C4 |
C5 |
H3 |
187.1 |
180.8 |
H1 |
C4 |
C5 |
H4 |
306.7 |
300.7 |
H1 |
C4 |
C3 |
C8 |
288.6 |
297.7 |
C3 |
C4 |
H1 |
H2 |
240.4 |
239.9 |
H1 |
C4 |
C3 |
H11 |
176.8 |
177.9 |
C5 |
C4 |
H2 |
C3 |
120.9 |
119.8 |
H2 |
C4 |
C5 |
N6 |
186.6 |
180.9 |
C5 |
C4 |
H2 |
H1 |
240.5 |
239.9 |
H2 |
C4 |
C5 |
H3 |
306.8 |
300.9 |
H2 |
C4 |
C5 |
H4 |
66.4 |
60.8 |
H2 |
C4 |
C3 |
C8 |
168.8 |
177.6 |
C3 |
C4 |
H2 |
H1 |
119.6 |
120.1 |
H2 |
C4 |
C3 |
H11 |
57.0 |
57.8 |
H3 |
C5 |
C4 |
C3 |
67.0 |
60.8 |
C4 |
C5 |
H3 |
N6 |
238.8 |
240.0 |
H3 |
C5 |
C4 |
H1 |
187.1 |
180.8 |
H3 |
C5 |
C4 |
H2 |
306.8 |
300.9 |
C4 |
C5 |
H3 |
H4 |
119.4 |
120.0 |
H3 |
C5 |
N6 |
C9 |
74.2 |
65.8 |
H3 |
C5 |
N6 |
C7 |
300.9 |
301.8 |
N6 |
C5 |
H3 |
H4 |
240.6 |
240.0 |
H4 |
C5 |
C4 |
C3 |
186.6 |
180.8 |
C4 |
C5 |
H4 |
N6 |
121.2 |
120.1 |
H4 |
C5 |
C4 |
H1 |
306.7 |
300.7 |
H4 |
C5 |
C4 |
H2 |
66.4 |
60.8 |
C4 |
C5 |
H4 |
H3 |
240.6 |
240.0 |
H4 |
C5 |
N6 |
C9 |
314.7 |
305.8 |
H4 |
C5 |
N6 |
C7 |
181.4 |
181.8 |
N6 |
C5 |
H4 |
H3 |
119.4 |
120.0 |
N6 |
C7 |
H6 |
H7 |
119.5 |
240.0 |
C8 |
C7 |
H6 |
H7 |
240.5 |
120.0 |
N6 |
C7 |
H7 |
H6 |
240.5 |
120.0 |
C8 |
C7 |
H7 |
H6 |
119.5 |
240.0 |
C3 |
C8 |
H8 |
H9 |
119.5 |
239.9 |
H8 |
C8 |
C7 |
H6 |
173.0 |
299.1 |
H8 |
C8 |
C7 |
H7 |
53.3 |
59.1 |
C3 |
C8 |
H9 |
H8 |
240.5 |
120.1 |
H9 |
C8 |
C7 |
H6 |
53.3 |
59.2 |
H9 |
C8 |
C7 |
H7 |
293.7 |
179.2 |
H10 |
C12 |
C11 |
H5 |
0.4 |
360.0 |
C4 |
C3 |
H11 |
C8 |
119.3 |
119.6 |
H11 |
C3 |
C4 |
H1 |
176.8 |
177.9 |
H11 |
C3 |
C4 |
H2 |
57.0 |
57.8 |
H11 |
C3 |
C8 |
H8 |
183.2 |
302.3 |
H11 |
C3 |
C8 |
H9 |
302.8 |
182.2 |
O2 |
C1 |
H12 |
H13 |
120.0 |
120.0 |
O2 |
C1 |
H12 |
H14 |
240.0 |
240.0 |
H13 |
C1 |
H12 |
H14 |
120.0 |
120.0 |
O2 |
C1 |
H13 |
H12 |
239.9 |
240.0 |
O2 |
C1 |
H13 |
H14 |
120.0 |
120.0 |
H12 |
C1 |
H13 |
H14 |
240.1 |
240.0 |
O2 |
C1 |
H14 |
H12 |
120.0 |
120.0 |
O2 |
C1 |
H14 |
H13 |
240.0 |
240.0 |
H12 |
C1 |
H14 |
H13 |
120.0 |
120.0 |
H17 |
C20 |
C19 |
C30 |
1.0 |
0.0 |
H20 |
N26 |
N28 |
C29 |
179.1 |
180.0 |
H20 |
N26 |
C25 |
H19 |
0.1 |
359.8 |
C19 |
C30 |
H22 |
N31 |
180.0 |
179.6 |