PDB Chemical Component 3QY

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 3QY

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N26 N28 1.398 1.400
N26 C25 1.348 1.348
N28 C29 1.306 1.306
C25 C24 1.366 1.366
C29 C24 1.410 1.410
C24 C21 1.482 1.480
C21 C20 1.362 1.356
C21 N22 1.374 1.377
C20 C19 1.467 1.462
N22 C18 1.371 1.374
C19 C18 1.420 1.412
C19 C30 1.404 1.394
C18 C17 1.393 1.390
C30 N31 1.331 1.317
C17 C16 1.391 1.386
N31 C16 1.339 1.328
C1 O2 1.442 1.428
C16 N15 1.406 1.395
C4 C5 1.538 1.531
C4 C3 1.546 1.531
O2 C3 1.444 1.429
C5 N6 1.482 1.468
C3 C8 1.547 1.532
N15 C13 1.403 1.386
N14 C13 1.343 1.329
N14 C9 1.339 1.324
N6 C9 1.400 1.383
N6 C7 1.483 1.469
C8 C7 1.540 1.531
C13 C12 1.408 1.397
C9 N10 1.341 1.325
C12 C11 1.389 1.381
N10 C11 1.336 1.326
C4 H1 1.100 1.090
C4 H2 1.100 1.090
C5 H3 1.100 1.090
C5 H4 1.100 1.089
C11 H5 1.080 1.080
C7 H6 1.101 1.090
C7 H7 1.100 1.090
C8 H8 1.100 1.090
C8 H9 1.100 1.090
C12 H10 1.080 1.080
C3 H11 1.100 1.090
C1 H12 1.100 1.090
C1 H13 1.100 1.090
C1 H14 1.100 1.090
N15 H15 1.000 0.970
C17 H16 1.080 1.080
C20 H17 1.080 1.080
N22 H18 1.000 0.970
C25 H19 1.080 1.080
N26 H20 1.000 0.970
C29 H21 1.080 1.080
C30 H22 1.080 1.080

Bond Angles for 3QY

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
N26 N28 C29 108.3 108.6
N28 N26 H20 125.8 125.9
N26 C25 H19 126.1 126.2
N28 C29 H21 125.8 125.9
C21 C20 H17 126.5 126.5
C21 N22 H18 124.9 125.1
C20 C19 C30 136.1 134.6
C19 C30 N31 120.2 120.3
C19 C30 H22 119.9 119.9
C18 C17 H16 120.2 120.6
N31 C30 H22 119.9 119.9
O2 C1 H12 109.5 109.5
O2 C1 H13 109.5 109.5
O2 C1 H14 109.5 109.5
C16 N15 H15 115.9 120.0
C5 C4 C3 110.5 109.3
C4 C5 N6 110.8 109.5
C5 C4 H1 109.2 109.5
C5 C4 H2 109.2 109.5
C4 C5 H3 109.2 109.4
C4 C5 H4 109.2 109.5
C4 C3 C8 114.1 109.1
C3 C4 H1 109.2 109.5
C3 C4 H2 109.2 109.5
C4 C3 H11 103.6 109.5
O2 C3 H11 104.5 109.6
C5 N6 C9 113.0 111.0
C5 N6 C7 112.6 111.2
N6 C5 H3 109.2 109.5
N6 C5 H4 109.2 109.5
C3 C8 H8 109.2 109.5
C3 C8 H9 109.2 109.5
N6 C9 N10 121.5 119.2
N6 C7 H6 109.2 109.5
N6 C7 H7 109.2 109.5
C8 C7 H6 109.2 109.5
C8 C7 H7 109.2 109.5
C13 C12 H10 120.7 120.7
C12 C11 H5 120.3 120.3
N10 C11 H5 120.3 120.3
H1 C4 H2 109.5 109.5
H3 C5 H4 109.4 109.4
H6 C7 H7 109.4 109.5
H8 C8 H9 109.4 109.5
H12 C1 H13 109.5 109.5
H12 C1 H14 109.4 109.5
H13 C1 H14 109.5 109.5

Torsion Angles for 3QY

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
N28 N26 C25 H19 180.1 180.1
N26 N28 C29 H21 181.3 180.1
C29 N28 N26 H20 179.1 180.0
C24 C21 C20 H17 2.1 360.0
C24 C21 N22 H18 358.5 360.0
C21 C20 C19 C30 181.0 180.0
N22 C21 C20 H17 180.2 180.0
C20 C19 C30 N31 180.3 179.6
C20 C19 C30 H22 0.4 360.0
N22 C18 C17 H16 358.8 0.0
C19 C18 C17 H16 179.2 180.1
N31 C30 C19 H22 180.0 179.6
C19 C30 N31 H22 180.0 180.4
C17 C16 N15 H15 187.2 5.2
N31 C16 N15 H15 5.7 184.9
C1 O2 C3 H11 181.5 29.8
H12 C1 O2 H13 240.0 240.0
H12 C1 O2 H14 120.0 120.0
H13 C1 O2 H14 240.0 240.0
C5 C4 C3 C8 48.7 57.6
C3 C4 C5 H1 239.8 240.0
C3 C4 C5 H2 120.2 120.0
C5 C4 C3 H11 296.9 297.8
C4 C5 N6 C9 194.4 185.8
C4 C5 N6 C7 61.1 61.7
N6 C5 C4 H3 239.8 240.0
N6 C5 C4 H4 120.2 120.1
H1 C4 C5 H2 240.3 239.9
H3 C5 C4 H4 240.4 240.0
C3 C4 C5 N6 306.8 300.8
C5 C4 C3 H1 120.1 119.9
C5 C4 C3 H2 239.9 240.0
C3 C4 C5 H3 67.0 60.8
C3 C4 C5 H4 186.6 180.8
O2 C3 C4 H11 246.9 239.7
C4 C3 C8 H8 71.3 182.4
C4 C3 C8 H9 191.0 62.3
H1 C4 C3 H2 119.7 120.1
O2 C3 C4 H1 63.6 57.6
O2 C3 C4 H2 303.9 297.5
C4 C3 O2 H11 112.6 120.2
O2 C3 C8 H8 296.4 62.5
O2 C3 C8 H9 56.1 302.4
N6 C5 C4 C3 306.8 300.8
N6 C5 C4 H1 66.9 60.8
N6 C5 C4 H2 186.6 180.9
C4 C5 N6 H3 120.2 120.0
C4 C5 N6 H4 239.8 240.0
C5 N6 C9 N10 245.6 0.0
C5 N6 C7 H6 59.1 178.2
C5 N6 C7 H7 178.7 58.2
H3 C5 N6 H4 119.6 120.0
C8 C3 C4 H1 288.6 297.7
C8 C3 C4 H2 168.8 177.6
C4 C3 C8 H11 248.2 240.1
C3 C8 C7 H6 293.2 179.2
C3 C8 C7 H7 173.5 299.2
H8 C8 C3 H9 240.4 120.1
N15 C13 C12 H10 0.2 0.0
N14 C13 C12 H10 180.6 180.0
C5 N6 C9 C7 228.2 235.8
C9 N6 C5 H3 74.2 65.8
C9 N6 C5 H4 314.7 305.8
C9 N6 C7 H6 287.1 54.2
C9 N6 C7 H7 46.7 294.2
C5 N6 C7 C9 132.0 124.1
C7 N6 C5 H3 300.9 301.8
C7 N6 C5 H4 181.4 181.8
C8 C7 N6 H6 239.8 120.0
C8 C7 N6 H7 120.2 240.0
H6 C7 N6 H7 240.3 120.0
C4 C3 C8 C7 311.2 302.3
C5 N6 C7 C8 298.9 298.2
N6 C7 C8 H6 120.2 240.0
N6 C7 C8 H7 239.8 120.0
H6 C7 C8 H7 119.7 240.0
C13 C12 C11 H5 180.4 180.0
C9 N10 C11 H5 179.4 180.0
N10 C11 C12 H5 180.0 180.2
C12 C11 N10 H5 180.0 179.8
C5 C4 H1 C3 239.1 240.2
H1 C4 C5 N6 66.9 60.8
C5 C4 H1 H2 119.5 120.1
H1 C4 C5 H3 187.1 180.8
H1 C4 C5 H4 306.7 300.7
H1 C4 C3 C8 288.6 297.7
C3 C4 H1 H2 240.4 239.9
H1 C4 C3 H11 176.8 177.9
C5 C4 H2 C3 120.9 119.8
H2 C4 C5 N6 186.6 180.9
C5 C4 H2 H1 240.5 239.9
H2 C4 C5 H3 306.8 300.9
H2 C4 C5 H4 66.4 60.8
H2 C4 C3 C8 168.8 177.6
C3 C4 H2 H1 119.6 120.1
H2 C4 C3 H11 57.0 57.8
H3 C5 C4 C3 67.0 60.8
C4 C5 H3 N6 238.8 240.0
H3 C5 C4 H1 187.1 180.8
H3 C5 C4 H2 306.8 300.9
C4 C5 H3 H4 119.4 120.0
H3 C5 N6 C9 74.2 65.8
H3 C5 N6 C7 300.9 301.8
N6 C5 H3 H4 240.6 240.0
H4 C5 C4 C3 186.6 180.8
C4 C5 H4 N6 121.2 120.1
H4 C5 C4 H1 306.7 300.7
H4 C5 C4 H2 66.4 60.8
C4 C5 H4 H3 240.6 240.0
H4 C5 N6 C9 314.7 305.8
H4 C5 N6 C7 181.4 181.8
N6 C5 H4 H3 119.4 120.0
N6 C7 H6 H7 119.5 240.0
C8 C7 H6 H7 240.5 120.0
N6 C7 H7 H6 240.5 120.0
C8 C7 H7 H6 119.5 240.0
C3 C8 H8 H9 119.5 239.9
H8 C8 C7 H6 173.0 299.1
H8 C8 C7 H7 53.3 59.1
C3 C8 H9 H8 240.5 120.1
H9 C8 C7 H6 53.3 59.2
H9 C8 C7 H7 293.7 179.2
H10 C12 C11 H5 0.4 360.0
C4 C3 H11 C8 119.3 119.6
H11 C3 C4 H1 176.8 177.9
H11 C3 C4 H2 57.0 57.8
H11 C3 C8 H8 183.2 302.3
H11 C3 C8 H9 302.8 182.2
O2 C1 H12 H13 120.0 120.0
O2 C1 H12 H14 240.0 240.0
H13 C1 H12 H14 120.0 120.0
O2 C1 H13 H12 239.9 240.0
O2 C1 H13 H14 120.0 120.0
H12 C1 H13 H14 240.1 240.0
O2 C1 H14 H12 120.0 120.0
O2 C1 H14 H13 240.0 240.0
H12 C1 H14 H13 120.0 120.0
H17 C20 C19 C30 1.0 0.0
H20 N26 N28 C29 179.1 180.0
H20 N26 C25 H19 0.1 359.8
C19 C30 H22 N31 180.0 179.6