PDB Chemical Component 3Q3
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 3Q3
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C2 |
C1 |
1.377 |
1.383 |
| C1 |
C3 |
1.376 |
1.384 |
| C1 |
H1 |
1.080 |
1.080 |
| C2 |
C6 |
1.375 |
1.382 |
| C2 |
H2 |
1.080 |
1.080 |
| C3 |
C7 |
1.375 |
1.381 |
| C3 |
H3 |
1.080 |
1.079 |
| C5 |
C4 |
1.380 |
1.355 |
| C10 |
C4 |
1.387 |
1.409 |
| C4 |
H4 |
1.080 |
1.080 |
| C11 |
C5 |
1.379 |
1.406 |
| C5 |
H5 |
1.080 |
1.081 |
| C6 |
C13 |
1.374 |
1.389 |
| C6 |
H6 |
1.080 |
1.079 |
| C13 |
C7 |
1.375 |
1.388 |
| C7 |
H7 |
1.080 |
1.081 |
| C8 |
C11 |
1.379 |
1.378 |
| C8 |
C12 |
1.376 |
1.409 |
| C8 |
H8 |
1.080 |
1.080 |
| C15 |
C9 |
1.379 |
1.393 |
| C14 |
C9 |
1.377 |
1.394 |
| C9 |
H9 |
1.080 |
1.080 |
| C12 |
C10 |
1.377 |
1.472 |
| C10 |
C16 |
1.424 |
1.392 |
| C14 |
C11 |
1.453 |
1.482 |
| N26 |
C12 |
1.368 |
1.321 |
| C13 |
N30 |
1.400 |
1.399 |
| N23 |
C14 |
1.335 |
1.334 |
| N24 |
C15 |
1.336 |
1.330 |
| C15 |
N27 |
1.415 |
1.386 |
| N25 |
C16 |
1.337 |
1.343 |
| C16 |
N28 |
1.363 |
1.387 |
| N29 |
C17 |
1.400 |
1.385 |
| C17 |
N24 |
1.336 |
1.325 |
| C17 |
N23 |
1.340 |
1.323 |
| N30 |
C18 |
1.375 |
1.348 |
| C18 |
C22 |
1.500 |
1.507 |
| C18 |
O31 |
1.223 |
1.212 |
| N27 |
C19 |
1.442 |
1.470 |
| C21 |
C19 |
1.517 |
1.531 |
| C19 |
H19 |
1.100 |
1.090 |
| C19 |
H19A |
1.100 |
1.090 |
| C22 |
C20 |
1.522 |
1.532 |
| C20 |
N27 |
1.451 |
1.470 |
| C20 |
H20 |
1.100 |
1.090 |
| C20 |
H20A |
1.100 |
1.089 |
| O32 |
C21 |
1.433 |
1.430 |
| C21 |
H21 |
1.100 |
1.091 |
| C21 |
H21A |
1.100 |
1.090 |
| C22 |
O32 |
1.433 |
1.430 |
| C22 |
H22 |
1.100 |
1.089 |
| N26 |
N25 |
1.342 |
1.399 |
| N28 |
HN28 |
1.000 |
0.970 |
| N28 |
HN2A |
1.000 |
0.969 |
| N29 |
HN29 |
1.000 |
0.970 |
| N29 |
HN2B |
1.000 |
0.970 |
| N30 |
HN30 |
1.000 |
0.970 |
| N25 |
HN25 |
1.000 |
0.970 |
Bond Angles for 3Q3
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
C1 |
C3 |
120.0 |
120.1 |
| C2 |
C1 |
H1 |
120.0 |
120.0 |
| C3 |
C1 |
H1 |
120.0 |
119.9 |
| C1 |
C3 |
C7 |
119.9 |
120.0 |
| C1 |
C3 |
H3 |
120.1 |
120.0 |
| C6 |
C2 |
H2 |
119.9 |
119.9 |
| C2 |
C6 |
C13 |
119.7 |
119.9 |
| C2 |
C6 |
H6 |
120.2 |
120.1 |
| C7 |
C3 |
H3 |
120.1 |
120.0 |
| C3 |
C7 |
H7 |
120.0 |
120.0 |
| C5 |
C4 |
H4 |
121.6 |
120.1 |
| C10 |
C4 |
H4 |
121.5 |
120.1 |
| C11 |
C5 |
H5 |
118.3 |
119.2 |
| C13 |
C6 |
H6 |
120.1 |
120.0 |
| C6 |
C13 |
C7 |
120.4 |
119.8 |
| C6 |
C13 |
N30 |
119.4 |
120.1 |
| C13 |
C7 |
H7 |
120.0 |
120.0 |
| C11 |
C8 |
C12 |
116.2 |
119.4 |
| C11 |
C8 |
H8 |
121.9 |
120.3 |
| C12 |
C8 |
H8 |
121.9 |
120.3 |
| C8 |
C12 |
C10 |
124.6 |
118.7 |
| C15 |
C9 |
H9 |
121.3 |
120.8 |
| C14 |
C9 |
H9 |
121.3 |
120.8 |
| C12 |
C10 |
C16 |
105.2 |
106.3 |
| C10 |
C16 |
N28 |
123.2 |
126.1 |
| C13 |
N30 |
C18 |
120.1 |
120.0 |
| C13 |
N30 |
HN30 |
119.9 |
120.0 |
| N24 |
C15 |
N27 |
119.1 |
120.4 |
| C15 |
N27 |
C19 |
116.5 |
111.0 |
| C15 |
N27 |
C20 |
117.1 |
111.0 |
| N25 |
C16 |
N28 |
125.4 |
126.1 |
| C16 |
N28 |
HN28 |
109.5 |
120.0 |
| C16 |
N28 |
HN2A |
109.5 |
120.0 |
| N23 |
C17 |
N24 |
124.7 |
121.8 |
| N30 |
C18 |
O31 |
125.7 |
120.0 |
| C22 |
C18 |
O31 |
123.1 |
120.0 |
| C18 |
C22 |
C20 |
110.4 |
109.5 |
| C18 |
C22 |
O32 |
104.5 |
109.5 |
| C18 |
C22 |
H22 |
112.3 |
109.5 |
| N27 |
C19 |
H19 |
112.2 |
109.5 |
| N27 |
C19 |
H19A |
112.2 |
109.5 |
| C21 |
C19 |
H19 |
112.2 |
109.5 |
| C21 |
C19 |
H19A |
112.2 |
109.5 |
| H19 |
C19 |
H19A |
106.6 |
109.5 |
| C22 |
C20 |
N27 |
101.1 |
109.2 |
| C22 |
C20 |
H20 |
112.4 |
109.5 |
| C22 |
C20 |
H20A |
112.4 |
109.5 |
| N27 |
C20 |
H20 |
112.4 |
109.5 |
| N27 |
C20 |
H20A |
112.4 |
109.5 |
| H20 |
C20 |
H20A |
106.4 |
109.5 |
| O32 |
C21 |
H21 |
109.4 |
109.5 |
| O32 |
C21 |
H21A |
109.4 |
109.6 |
| H21 |
C21 |
H21A |
109.5 |
109.5 |
| O32 |
C22 |
H22 |
112.7 |
109.6 |
| N26 |
N25 |
HN25 |
127.9 |
125.0 |
| HN28 |
N28 |
HN2A |
109.5 |
120.0 |
| HN29 |
N29 |
HN2B |
109.4 |
120.1 |
Torsion Angles for 3Q3
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C3 |
C1 |
C2 |
H1 |
180.0 |
180.3 |
| C2 |
C1 |
C3 |
C7 |
359.9 |
359.8 |
| C2 |
C1 |
C3 |
H3 |
179.9 |
179.7 |
| C2 |
C1 |
C3 |
H1 |
180.0 |
179.7 |
| C7 |
C3 |
C1 |
H3 |
180.0 |
180.0 |
| C1 |
C3 |
C7 |
H7 |
179.9 |
180.0 |
| C2 |
C1 |
H1 |
C3 |
180.0 |
180.3 |
| H1 |
C1 |
C3 |
C7 |
180.0 |
180.1 |
| H1 |
C1 |
C3 |
H3 |
360.0 |
0.0 |
| C6 |
C2 |
C1 |
C3 |
0.1 |
360.0 |
| C6 |
C2 |
C1 |
H1 |
180.1 |
179.7 |
| C13 |
C6 |
C2 |
H6 |
180.0 |
180.0 |
| C2 |
C6 |
C13 |
C7 |
359.9 |
0.3 |
| C2 |
C6 |
C13 |
N30 |
180.0 |
180.0 |
| H2 |
C2 |
C1 |
C3 |
180.1 |
180.0 |
| H2 |
C2 |
C1 |
H1 |
0.1 |
359.7 |
| H2 |
C2 |
C6 |
C13 |
180.0 |
180.0 |
| H2 |
C2 |
C6 |
H6 |
360.0 |
360.0 |
| C7 |
C3 |
C1 |
H1 |
180.0 |
180.1 |
| C1 |
C3 |
C7 |
H3 |
180.0 |
180.0 |
| C6 |
C13 |
C7 |
C3 |
0.1 |
359.5 |
| C13 |
C7 |
C3 |
H7 |
180.0 |
180.5 |
| H3 |
C3 |
C1 |
H1 |
360.0 |
0.0 |
| C1 |
C3 |
H3 |
C7 |
180.0 |
180.0 |
| H3 |
C3 |
C7 |
H7 |
359.9 |
0.0 |
| C10 |
C4 |
C5 |
H4 |
180.0 |
180.3 |
| C5 |
C4 |
C10 |
H4 |
180.0 |
179.7 |
| C11 |
C5 |
C4 |
H4 |
179.5 |
180.0 |
| H5 |
C5 |
C4 |
H4 |
359.5 |
360.0 |
| C13 |
C6 |
C2 |
H2 |
180.0 |
180.0 |
| C2 |
C6 |
C13 |
H6 |
180.0 |
180.0 |
| C6 |
C13 |
C7 |
H7 |
180.2 |
180.0 |
| C6 |
C13 |
N30 |
C18 |
215.8 |
33.3 |
| C6 |
C13 |
N30 |
HN30 |
35.8 |
213.3 |
| H6 |
C6 |
C2 |
H2 |
360.0 |
360.0 |
| C2 |
C6 |
H6 |
C13 |
180.0 |
180.0 |
| H6 |
C6 |
C13 |
C7 |
179.9 |
180.2 |
| H6 |
C6 |
C13 |
N30 |
0.0 |
360.0 |
| C13 |
C7 |
C3 |
H3 |
179.9 |
180.5 |
| C3 |
C7 |
C13 |
H7 |
180.0 |
179.5 |
| C7 |
C13 |
C6 |
H6 |
179.9 |
180.2 |
| C6 |
C13 |
C7 |
N30 |
180.1 |
179.7 |
| H7 |
C7 |
C3 |
H3 |
359.9 |
0.0 |
| C8 |
C11 |
C5 |
H5 |
180.5 |
180.0 |
| C12 |
C8 |
C11 |
H8 |
180.0 |
179.7 |
| C11 |
C8 |
C12 |
C10 |
359.2 |
0.3 |
| C11 |
C8 |
C12 |
H8 |
180.0 |
180.3 |
| C8 |
C12 |
C10 |
C16 |
180.8 |
180.0 |
| C11 |
C8 |
H8 |
C12 |
180.0 |
179.7 |
| H8 |
C8 |
C12 |
C10 |
179.2 |
180.0 |
| C14 |
C9 |
C15 |
H9 |
180.0 |
179.8 |
| C15 |
C9 |
C14 |
H9 |
180.0 |
180.2 |
| C12 |
C10 |
C4 |
H4 |
179.9 |
180.0 |
| C10 |
C12 |
C8 |
H8 |
179.2 |
180.0 |
| C12 |
C10 |
C16 |
N28 |
180.0 |
180.0 |
| C16 |
C10 |
C4 |
H4 |
359.9 |
0.0 |
| N25 |
C16 |
C10 |
N28 |
180.5 |
179.9 |
| C10 |
C16 |
N28 |
HN28 |
180.0 |
359.9 |
| C10 |
C16 |
N28 |
HN2A |
300.0 |
179.9 |
| C14 |
C11 |
C5 |
H5 |
2.3 |
359.7 |
| C14 |
C11 |
C8 |
H8 |
358.4 |
0.2 |
| C11 |
C14 |
C9 |
H9 |
359.4 |
0.1 |
| N26 |
C12 |
C8 |
H8 |
0.6 |
359.8 |
| N30 |
C13 |
C6 |
H6 |
0.0 |
360.0 |
| C6 |
C13 |
N30 |
C7 |
179.9 |
180.3 |
| N30 |
C13 |
C7 |
H7 |
0.0 |
0.3 |
| C13 |
N30 |
C18 |
O31 |
355.1 |
5.3 |
| N23 |
C14 |
C9 |
H9 |
180.7 |
180.0 |
| N24 |
C15 |
C9 |
H9 |
178.8 |
180.0 |
| N24 |
C15 |
N27 |
C19 |
159.3 |
123.6 |
| N24 |
C15 |
N27 |
C20 |
20.6 |
360.0 |
| N27 |
C15 |
C9 |
H9 |
2.0 |
0.0 |
| C15 |
N27 |
C19 |
H19 |
269.0 |
57.7 |
| C15 |
N27 |
C19 |
H19A |
29.1 |
297.6 |
| C22 |
C20 |
N27 |
C15 |
210.3 |
182.4 |
| C15 |
N27 |
C20 |
H20 |
90.3 |
62.5 |
| C15 |
N27 |
C20 |
H20A |
330.3 |
302.3 |
| C10 |
C16 |
N25 |
N28 |
179.5 |
180.1 |
| N25 |
C16 |
N28 |
HN28 |
359.4 |
180.0 |
| N25 |
C16 |
N28 |
HN2A |
119.4 |
0.1 |
| HN28 |
N28 |
C16 |
HN2A |
240.0 |
179.9 |
| C17 |
N24 |
C15 |
N27 |
178.0 |
180.0 |
| C13 |
N30 |
C18 |
HN30 |
180.0 |
180.0 |
| C22 |
C18 |
N30 |
O31 |
180.4 |
180.0 |
| N30 |
C18 |
C22 |
O32 |
144.8 |
175.3 |
| N30 |
C18 |
C22 |
H22 |
22.4 |
55.1 |
| C13 |
N30 |
C18 |
C22 |
175.5 |
185.3 |
| N30 |
C18 |
C22 |
O31 |
179.6 |
180.0 |
| C18 |
C22 |
C20 |
N27 |
184.8 |
183.2 |
| C18 |
C22 |
C20 |
H20 |
304.8 |
303.2 |
| C18 |
C22 |
C20 |
H20A |
64.8 |
63.3 |
| O32 |
C22 |
C18 |
H22 |
122.4 |
120.1 |
| O31 |
C18 |
C22 |
C20 |
83.5 |
115.0 |
| O31 |
C18 |
C22 |
O32 |
325.2 |
355.2 |
| O31 |
C18 |
C22 |
H22 |
202.8 |
235.1 |
| C15 |
N27 |
C19 |
C20 |
219.8 |
236.2 |
| C21 |
C19 |
N27 |
H19 |
240.0 |
119.9 |
| C21 |
C19 |
N27 |
H19A |
120.0 |
240.0 |
| H19 |
C19 |
N27 |
H19A |
240.0 |
120.1 |
| C15 |
N27 |
C19 |
C21 |
149.1 |
177.6 |
| N27 |
C19 |
C21 |
H19 |
120.0 |
240.0 |
| N27 |
C19 |
C21 |
H19A |
240.0 |
120.0 |
| H19 |
C19 |
C21 |
H19A |
120.0 |
240.0 |
| N27 |
C19 |
H19 |
H19A |
123.2 |
239.9 |
| C21 |
C19 |
H19 |
H19A |
236.8 |
120.1 |
| N27 |
C19 |
H19A |
H19 |
236.8 |
120.1 |
| C21 |
C19 |
H19A |
H19 |
123.2 |
240.0 |
| C15 |
N27 |
C20 |
C22 |
210.3 |
182.4 |
| C20 |
C22 |
C18 |
O31 |
83.5 |
115.0 |
| C18 |
C22 |
C20 |
O32 |
245.2 |
240.1 |
| C18 |
C22 |
C20 |
H22 |
122.5 |
120.1 |
| N27 |
C20 |
C22 |
H20 |
240.0 |
240.1 |
| N27 |
C20 |
C22 |
H20A |
120.0 |
120.0 |
| H20 |
C20 |
C22 |
H20A |
240.0 |
239.9 |
| C15 |
N27 |
C20 |
C19 |
139.9 |
123.8 |
| C20 |
N27 |
C19 |
H19 |
49.2 |
181.5 |
| C20 |
N27 |
C19 |
H19A |
169.3 |
61.4 |
| C22 |
C20 |
N27 |
H20 |
120.0 |
119.9 |
| C22 |
C20 |
N27 |
H20A |
240.0 |
240.0 |
| H20 |
C20 |
N27 |
H20A |
120.0 |
120.1 |
| C22 |
C20 |
H20 |
N27 |
246.8 |
240.3 |
| C22 |
C20 |
H20 |
H20A |
123.4 |
120.1 |
| N27 |
C20 |
H20 |
H20A |
236.6 |
239.9 |
| C22 |
C20 |
H20A |
N27 |
113.2 |
119.8 |
| C22 |
C20 |
H20A |
H20 |
236.6 |
239.9 |
| N27 |
C20 |
H20A |
H20 |
123.4 |
120.1 |
| C18 |
C22 |
O32 |
C21 |
178.7 |
178.7 |
| O32 |
C21 |
C19 |
H19 |
300.8 |
176.8 |
| O32 |
C21 |
C19 |
H19A |
180.8 |
296.9 |
| H21 |
C21 |
O32 |
H21A |
120.0 |
120.1 |
| H21 |
C21 |
C19 |
H19 |
60.8 |
296.7 |
| H21 |
C21 |
C19 |
H19A |
300.8 |
56.7 |
| O32 |
C21 |
H21 |
H21A |
240.1 |
239.8 |
| H21A |
C21 |
C19 |
H19 |
180.8 |
56.8 |
| H21A |
C21 |
C19 |
H19A |
60.8 |
176.8 |
| O32 |
C21 |
H21A |
H21 |
119.9 |
120.1 |
| O32 |
C22 |
C18 |
O31 |
325.2 |
355.2 |
| C18 |
C22 |
O32 |
C20 |
118.5 |
119.9 |
| C18 |
C22 |
O32 |
H22 |
237.8 |
239.9 |
| O32 |
C22 |
C20 |
N27 |
299.6 |
303.1 |
| O32 |
C22 |
C20 |
H20 |
59.6 |
63.0 |
| O32 |
C22 |
C20 |
H20A |
179.6 |
183.1 |
| C22 |
O32 |
C21 |
H21 |
179.9 |
181.4 |
| C22 |
O32 |
C21 |
H21A |
59.9 |
61.3 |
| H22 |
C22 |
C18 |
O31 |
202.8 |
235.1 |
| C18 |
C22 |
H22 |
C20 |
238.7 |
239.9 |
| C18 |
C22 |
H22 |
O32 |
117.6 |
120.1 |
| H22 |
C22 |
C20 |
N27 |
62.4 |
63.1 |
| H22 |
C22 |
C20 |
H20 |
182.4 |
183.1 |
| H22 |
C22 |
C20 |
H20A |
302.4 |
303.2 |
| N26 |
N25 |
C16 |
N28 |
180.0 |
179.9 |
| C16 |
N28 |
HN28 |
HN2A |
120.0 |
180.1 |
| C16 |
N28 |
HN2A |
HN28 |
240.0 |
179.9 |
| C13 |
N30 |
HN30 |
C18 |
180.0 |
180.0 |
| HN30 |
N30 |
C18 |
O31 |
175.1 |
185.2 |
| HN25 |
N25 |
C16 |
N28 |
360.0 |
359.9 |