PDB Chemical Component 3Q1
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 3Q1
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C8 |
C9 |
1.379 |
1.356 |
| C10 |
C9 |
1.384 |
1.409 |
| C9 |
H9 |
1.080 |
1.080 |
| C7 |
C8 |
1.375 |
1.407 |
| C8 |
H8 |
1.080 |
1.080 |
| C6 |
C7 |
1.377 |
1.378 |
| C6 |
C5 |
1.372 |
1.409 |
| C6 |
H6 |
1.080 |
1.080 |
| C11 |
C12 |
1.375 |
1.393 |
| C13 |
C12 |
1.379 |
1.394 |
| C12 |
H12 |
1.080 |
1.080 |
| C5 |
C10 |
1.376 |
1.472 |
| C10 |
C2 |
1.423 |
1.392 |
| C11 |
C7 |
1.444 |
1.483 |
| N4 |
C5 |
1.367 |
1.321 |
| N17 |
C11 |
1.334 |
1.333 |
| N14 |
C13 |
1.337 |
1.330 |
| C13 |
N18 |
1.405 |
1.386 |
| N3 |
C2 |
1.336 |
1.343 |
| C2 |
N1 |
1.354 |
1.387 |
| N16 |
C15 |
1.396 |
1.384 |
| C15 |
N17 |
1.335 |
1.324 |
| C15 |
N14 |
1.338 |
1.325 |
| N18 |
C19 |
1.454 |
1.471 |
| C20 |
C19 |
1.509 |
1.531 |
| C19 |
H19 |
1.100 |
1.090 |
| C19 |
H19A |
1.100 |
1.090 |
| C22 |
C23 |
1.507 |
1.533 |
| C23 |
N18 |
1.456 |
1.469 |
| C23 |
H23 |
1.100 |
1.090 |
| C23 |
H23A |
1.100 |
1.090 |
| O21 |
C20 |
1.415 |
1.429 |
| C20 |
H20 |
1.100 |
1.090 |
| C20 |
H20A |
1.100 |
1.090 |
| C22 |
O21 |
1.422 |
1.431 |
| C22 |
H22 |
1.100 |
1.089 |
| C22 |
H22A |
1.100 |
1.090 |
| N4 |
N3 |
1.342 |
1.399 |
| N1 |
HN1 |
1.000 |
0.971 |
| N1 |
HN1A |
1.000 |
0.970 |
| N16 |
HN16 |
1.000 |
0.970 |
| N16 |
HN1B |
1.000 |
0.970 |
| N3 |
HN3 |
1.000 |
0.971 |
Bond Angles for 3Q1
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C8 |
C9 |
H9 |
121.6 |
120.1 |
| C10 |
C9 |
H9 |
121.6 |
120.1 |
| C7 |
C8 |
H8 |
118.4 |
119.2 |
| C7 |
C6 |
C5 |
116.3 |
119.4 |
| C7 |
C6 |
H6 |
121.9 |
120.3 |
| C5 |
C6 |
H6 |
121.9 |
120.3 |
| C6 |
C5 |
C10 |
124.3 |
118.7 |
| C11 |
C12 |
H12 |
121.4 |
120.8 |
| C13 |
C12 |
H12 |
121.4 |
120.8 |
| C5 |
C10 |
C2 |
105.0 |
106.3 |
| C10 |
C2 |
N1 |
122.6 |
126.1 |
| N14 |
C13 |
N18 |
119.7 |
120.4 |
| C13 |
N18 |
C19 |
110.5 |
111.0 |
| C13 |
N18 |
C23 |
111.0 |
111.0 |
| N3 |
C2 |
N1 |
125.9 |
126.2 |
| C2 |
N1 |
HN1 |
109.5 |
120.0 |
| C2 |
N1 |
HN1A |
109.5 |
120.0 |
| N17 |
C15 |
N14 |
124.7 |
121.8 |
| N18 |
C19 |
H19 |
108.4 |
109.4 |
| N18 |
C19 |
H19A |
108.3 |
109.5 |
| C20 |
C19 |
H19 |
108.3 |
109.5 |
| C20 |
C19 |
H19A |
108.4 |
109.5 |
| H19 |
C19 |
H19A |
110.6 |
109.5 |
| C22 |
C23 |
N18 |
112.6 |
109.3 |
| C22 |
C23 |
H23 |
108.4 |
109.6 |
| C22 |
C23 |
H23A |
108.4 |
109.5 |
| N18 |
C23 |
H23 |
108.4 |
109.5 |
| N18 |
C23 |
H23A |
108.4 |
109.5 |
| H23 |
C23 |
H23A |
110.5 |
109.4 |
| O21 |
C20 |
H20 |
109.8 |
109.6 |
| O21 |
C20 |
H20A |
109.9 |
109.5 |
| H20 |
C20 |
H20A |
109.1 |
109.5 |
| O21 |
C22 |
H22 |
109.8 |
109.5 |
| O21 |
C22 |
H22A |
109.8 |
109.5 |
| H22 |
C22 |
H22A |
109.1 |
109.6 |
| N4 |
N3 |
HN3 |
128.0 |
125.0 |
| HN1 |
N1 |
HN1A |
109.5 |
120.0 |
| HN16 |
N16 |
HN1B |
109.5 |
120.0 |
Torsion Angles for 3Q1
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C10 |
C9 |
C8 |
H9 |
180.0 |
180.3 |
| C8 |
C9 |
C10 |
H9 |
180.0 |
179.7 |
| C7 |
C8 |
C9 |
H9 |
179.5 |
179.9 |
| H8 |
C8 |
C9 |
H9 |
359.5 |
360.0 |
| C6 |
C7 |
C8 |
H8 |
180.8 |
180.0 |
| C5 |
C6 |
C7 |
H6 |
180.0 |
179.8 |
| C7 |
C6 |
C5 |
C10 |
359.8 |
0.2 |
| C7 |
C6 |
C5 |
H6 |
180.0 |
180.2 |
| C6 |
C5 |
C10 |
C2 |
180.3 |
180.0 |
| C7 |
C6 |
H6 |
C5 |
180.0 |
179.8 |
| H6 |
C6 |
C5 |
C10 |
179.8 |
180.0 |
| C13 |
C12 |
C11 |
H12 |
180.0 |
180.2 |
| C11 |
C12 |
C13 |
H12 |
180.0 |
179.8 |
| C5 |
C10 |
C9 |
H9 |
179.9 |
180.0 |
| C10 |
C5 |
C6 |
H6 |
179.8 |
180.0 |
| C5 |
C10 |
C2 |
N1 |
180.0 |
180.0 |
| C2 |
C10 |
C9 |
H9 |
0.1 |
0.1 |
| N3 |
C2 |
C10 |
N1 |
180.1 |
180.1 |
| C10 |
C2 |
N1 |
HN1 |
180.0 |
0.0 |
| C10 |
C2 |
N1 |
HN1A |
300.0 |
180.0 |
| C11 |
C7 |
C8 |
H8 |
0.6 |
359.7 |
| C11 |
C7 |
C6 |
H6 |
359.8 |
0.2 |
| C7 |
C11 |
C12 |
H12 |
2.0 |
0.0 |
| N4 |
C5 |
C6 |
H6 |
0.3 |
359.8 |
| N17 |
C11 |
C12 |
H12 |
179.7 |
180.0 |
| N14 |
C13 |
C12 |
H12 |
180.1 |
180.0 |
| N14 |
C13 |
N18 |
C19 |
193.4 |
236.3 |
| N14 |
C13 |
N18 |
C23 |
333.3 |
360.0 |
| N18 |
C13 |
C12 |
H12 |
359.1 |
359.9 |
| C13 |
N18 |
C19 |
H19 |
254.4 |
62.5 |
| C13 |
N18 |
C19 |
H19A |
14.4 |
302.4 |
| C22 |
C23 |
N18 |
C13 |
226.0 |
177.7 |
| C13 |
N18 |
C23 |
H23 |
106.0 |
57.6 |
| C13 |
N18 |
C23 |
H23A |
346.0 |
297.6 |
| C10 |
C2 |
N3 |
N1 |
179.9 |
179.9 |
| N3 |
C2 |
N1 |
HN1 |
359.9 |
180.0 |
| N3 |
C2 |
N1 |
HN1A |
119.9 |
359.9 |
| HN1 |
N1 |
C2 |
HN1A |
240.0 |
180.0 |
| C15 |
N14 |
C13 |
N18 |
181.0 |
180.1 |
| C13 |
N18 |
C19 |
C23 |
134.2 |
123.8 |
| C20 |
C19 |
N18 |
H19 |
240.0 |
119.9 |
| C20 |
C19 |
N18 |
H19A |
120.0 |
240.0 |
| H19 |
C19 |
N18 |
H19A |
240.0 |
120.1 |
| C13 |
N18 |
C19 |
C20 |
134.4 |
182.4 |
| N18 |
C19 |
C20 |
H19 |
120.0 |
240.1 |
| N18 |
C19 |
C20 |
H19A |
240.0 |
120.0 |
| H19 |
C19 |
C20 |
H19A |
120.0 |
239.8 |
| N18 |
C19 |
H19 |
H19A |
118.6 |
239.9 |
| C20 |
C19 |
H19 |
H19A |
241.4 |
120.2 |
| N18 |
C19 |
H19A |
H19 |
241.4 |
120.0 |
| C20 |
C19 |
H19A |
H19 |
118.6 |
239.8 |
| C13 |
N18 |
C23 |
C22 |
226.0 |
177.7 |
| N18 |
C23 |
C22 |
H23 |
240.0 |
240.0 |
| N18 |
C23 |
C22 |
H23A |
120.0 |
119.9 |
| H23 |
C23 |
C22 |
H23A |
240.0 |
240.0 |
| C13 |
N18 |
C23 |
C19 |
226.0 |
236.2 |
| C23 |
N18 |
C19 |
H19 |
120.2 |
298.6 |
| C23 |
N18 |
C19 |
H19A |
240.2 |
178.6 |
| C22 |
C23 |
N18 |
H23 |
120.0 |
120.0 |
| C22 |
C23 |
N18 |
H23A |
240.0 |
240.1 |
| H23 |
C23 |
N18 |
H23A |
120.0 |
120.0 |
| C22 |
C23 |
H23 |
N18 |
237.4 |
240.1 |
| C22 |
C23 |
H23 |
H23A |
118.7 |
120.1 |
| N18 |
C23 |
H23 |
H23A |
241.3 |
239.9 |
| C22 |
C23 |
H23A |
N18 |
122.6 |
119.8 |
| C22 |
C23 |
H23A |
H23 |
241.3 |
239.9 |
| N18 |
C23 |
H23A |
H23 |
118.7 |
120.1 |
| O21 |
C20 |
C19 |
H19 |
276.2 |
63.0 |
| O21 |
C20 |
C19 |
H19A |
156.2 |
183.1 |
| H20 |
C20 |
O21 |
H20A |
120.0 |
120.1 |
| H20 |
C20 |
C19 |
H19 |
36.2 |
183.0 |
| H20 |
C20 |
C19 |
H19A |
276.2 |
303.2 |
| O21 |
C20 |
H20 |
H20A |
239.6 |
239.9 |
| H20A |
C20 |
C19 |
H19 |
156.2 |
303.1 |
| H20A |
C20 |
C19 |
H19A |
36.1 |
63.2 |
| O21 |
C20 |
H20A |
H20 |
120.4 |
120.2 |
| O21 |
C22 |
C23 |
N18 |
323.6 |
56.8 |
| O21 |
C22 |
C23 |
H23 |
83.6 |
176.8 |
| O21 |
C22 |
C23 |
H23A |
203.6 |
296.8 |
| C22 |
O21 |
C20 |
H20 |
165.0 |
298.7 |
| C22 |
O21 |
C20 |
H20A |
45.1 |
178.6 |
| H22 |
C22 |
O21 |
H22A |
120.0 |
120.2 |
| H22 |
C22 |
C23 |
N18 |
83.6 |
176.7 |
| H22 |
C22 |
C23 |
H23 |
203.6 |
296.8 |
| H22 |
C22 |
C23 |
H23A |
323.6 |
56.8 |
| O21 |
C22 |
H22 |
H22A |
239.6 |
239.9 |
| H22A |
C22 |
C23 |
N18 |
203.6 |
296.9 |
| H22A |
C22 |
C23 |
H23 |
323.6 |
57.0 |
| H22A |
C22 |
C23 |
H23A |
83.6 |
177.0 |
| O21 |
C22 |
H22A |
H22 |
120.4 |
120.2 |
| N4 |
N3 |
C2 |
N1 |
180.1 |
179.8 |
| C2 |
N1 |
HN1 |
HN1A |
120.0 |
180.0 |
| C2 |
N1 |
HN1A |
HN1 |
240.0 |
180.0 |
| HN3 |
N3 |
C2 |
N1 |
0.1 |
0.1 |