PDB Chemical Component 3Q0
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 3Q0
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C12 |
C13 |
1.376 |
1.355 |
| C14 |
C13 |
1.389 |
1.409 |
| C13 |
H13 |
1.080 |
1.080 |
| C11 |
C12 |
1.377 |
1.408 |
| C12 |
H12 |
1.080 |
1.080 |
| C20 |
C11 |
1.378 |
1.378 |
| C20 |
C19 |
1.373 |
1.410 |
| C20 |
H20 |
1.080 |
1.080 |
| C6 |
C5 |
1.379 |
1.393 |
| C4 |
C5 |
1.382 |
1.394 |
| C5 |
H5 |
1.080 |
1.079 |
| C19 |
C14 |
1.380 |
1.472 |
| C14 |
C15 |
1.427 |
1.392 |
| C6 |
C11 |
1.447 |
1.482 |
| N18 |
C19 |
1.367 |
1.321 |
| N7 |
C6 |
1.336 |
1.333 |
| N10 |
C4 |
1.339 |
1.330 |
| C4 |
N3 |
1.402 |
1.386 |
| N17 |
C15 |
1.340 |
1.344 |
| C15 |
N16 |
1.363 |
1.386 |
| N9 |
C8 |
1.396 |
1.384 |
| C8 |
N7 |
1.337 |
1.324 |
| C8 |
N10 |
1.340 |
1.326 |
| C2 |
C1 |
1.509 |
1.530 |
| C1 |
H1 |
1.100 |
1.089 |
| C1 |
H1A |
1.100 |
1.090 |
| C1 |
H1B |
1.100 |
1.091 |
| N3 |
C2 |
1.453 |
1.465 |
| C2 |
H2 |
1.100 |
1.090 |
| C2 |
H2A |
1.100 |
1.091 |
| N18 |
N17 |
1.346 |
1.399 |
| N16 |
HN16 |
1.000 |
0.970 |
| N16 |
HN1A |
1.001 |
0.970 |
| N9 |
HN9 |
1.000 |
0.971 |
| N9 |
HN9A |
1.000 |
0.969 |
| N3 |
HN3 |
1.000 |
0.970 |
| N17 |
HN17 |
1.000 |
0.969 |
Bond Angles for 3Q0
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C12 |
C13 |
H13 |
121.5 |
120.1 |
| C14 |
C13 |
H13 |
121.6 |
120.0 |
| C11 |
C12 |
H12 |
118.3 |
119.2 |
| C11 |
C20 |
C19 |
116.3 |
119.4 |
| C11 |
C20 |
H20 |
121.8 |
120.3 |
| C19 |
C20 |
H20 |
121.9 |
120.3 |
| C20 |
C19 |
C14 |
124.5 |
118.7 |
| C6 |
C5 |
H5 |
121.6 |
120.8 |
| C4 |
C5 |
H5 |
121.6 |
120.8 |
| C19 |
C14 |
C15 |
105.3 |
106.3 |
| C14 |
C15 |
N16 |
123.3 |
126.2 |
| N10 |
C4 |
N3 |
118.4 |
120.4 |
| C4 |
N3 |
C2 |
109.8 |
120.0 |
| C4 |
N3 |
HN3 |
109.3 |
120.0 |
| N17 |
C15 |
N16 |
125.7 |
126.1 |
| C15 |
N16 |
HN16 |
109.5 |
120.0 |
| C15 |
N16 |
HN1A |
109.5 |
120.1 |
| N7 |
C8 |
N10 |
124.3 |
121.7 |
| C2 |
C1 |
H1 |
109.5 |
109.5 |
| C2 |
C1 |
H1A |
109.4 |
109.4 |
| C2 |
C1 |
H1B |
109.5 |
109.4 |
| H1 |
C1 |
H1A |
109.5 |
109.5 |
| H1 |
C1 |
H1B |
109.5 |
109.5 |
| H1A |
C1 |
H1B |
109.5 |
109.5 |
| N3 |
C2 |
H2 |
109.4 |
109.5 |
| N3 |
C2 |
H2A |
109.4 |
109.4 |
| H2 |
C2 |
H2A |
109.5 |
109.5 |
| N18 |
N17 |
HN17 |
127.8 |
125.0 |
| HN16 |
N16 |
HN1A |
109.5 |
120.0 |
| HN9 |
N9 |
HN9A |
109.5 |
120.0 |
Torsion Angles for 3Q0
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C14 |
C13 |
C12 |
H13 |
180.0 |
180.3 |
| C12 |
C13 |
C14 |
H13 |
180.0 |
179.7 |
| C11 |
C12 |
C13 |
H13 |
179.1 |
180.0 |
| H12 |
C12 |
C13 |
H13 |
359.1 |
360.0 |
| C20 |
C11 |
C12 |
H12 |
181.2 |
180.0 |
| C19 |
C20 |
C11 |
H20 |
180.0 |
179.7 |
| C11 |
C20 |
C19 |
C14 |
359.5 |
0.3 |
| C11 |
C20 |
C19 |
H20 |
180.0 |
180.3 |
| C20 |
C19 |
C14 |
C15 |
180.6 |
180.0 |
| C11 |
C20 |
H20 |
C19 |
180.0 |
179.7 |
| H20 |
C20 |
C19 |
C14 |
179.5 |
180.0 |
| C4 |
C5 |
C6 |
H5 |
180.0 |
180.2 |
| C6 |
C5 |
C4 |
H5 |
180.0 |
179.8 |
| C19 |
C14 |
C13 |
H13 |
179.9 |
180.0 |
| C14 |
C19 |
C20 |
H20 |
179.5 |
180.0 |
| C19 |
C14 |
C15 |
N16 |
180.3 |
179.9 |
| C15 |
C14 |
C13 |
H13 |
0.1 |
359.9 |
| N17 |
C15 |
C14 |
N16 |
180.0 |
180.0 |
| C14 |
C15 |
N16 |
HN16 |
180.0 |
0.0 |
| C14 |
C15 |
N16 |
HN1A |
300.0 |
179.9 |
| C6 |
C11 |
C12 |
H12 |
1.8 |
359.8 |
| C6 |
C11 |
C20 |
H20 |
358.9 |
0.3 |
| C11 |
C6 |
C5 |
H5 |
1.8 |
0.0 |
| N18 |
C19 |
C20 |
H20 |
0.4 |
359.7 |
| N7 |
C6 |
C5 |
H5 |
180.1 |
180.0 |
| N10 |
C4 |
C5 |
H5 |
180.3 |
180.0 |
| N10 |
C4 |
N3 |
C2 |
183.3 |
180.0 |
| N10 |
C4 |
N3 |
HN3 |
303.3 |
359.9 |
| N3 |
C4 |
C5 |
H5 |
360.0 |
360.0 |
| C4 |
N3 |
C2 |
H2 |
144.8 |
60.0 |
| C4 |
N3 |
C2 |
H2A |
24.8 |
299.9 |
| C14 |
C15 |
N17 |
N16 |
180.0 |
180.0 |
| N17 |
C15 |
N16 |
HN16 |
360.0 |
180.0 |
| N17 |
C15 |
N16 |
HN1A |
120.0 |
359.9 |
| HN16 |
N16 |
C15 |
HN1A |
240.0 |
180.1 |
| C8 |
N10 |
C4 |
N3 |
180.1 |
180.0 |
| C4 |
N3 |
C2 |
C1 |
264.8 |
180.0 |
| H1 |
C1 |
C2 |
H1A |
240.0 |
240.0 |
| H1 |
C1 |
C2 |
H1B |
120.0 |
120.0 |
| H1A |
C1 |
C2 |
H1B |
240.0 |
240.1 |
| C2 |
C1 |
H1 |
H1A |
120.0 |
120.0 |
| C2 |
C1 |
H1 |
H1B |
240.0 |
240.0 |
| H1A |
C1 |
H1 |
H1B |
120.0 |
120.0 |
| C2 |
C1 |
H1A |
H1 |
240.0 |
240.0 |
| C2 |
C1 |
H1A |
H1B |
120.0 |
119.9 |
| H1 |
C1 |
H1A |
H1B |
240.0 |
239.9 |
| C2 |
C1 |
H1B |
H1 |
120.0 |
120.0 |
| C2 |
C1 |
H1B |
H1A |
240.0 |
240.1 |
| H1 |
C1 |
H1B |
H1A |
120.0 |
120.1 |
| C4 |
N3 |
C2 |
HN3 |
120.0 |
179.9 |
| N3 |
C2 |
C1 |
H1 |
180.0 |
60.0 |
| N3 |
C2 |
C1 |
H1A |
300.0 |
180.0 |
| N3 |
C2 |
C1 |
H1B |
60.0 |
299.9 |
| H2 |
C2 |
N3 |
H2A |
120.0 |
120.0 |
| H2 |
C2 |
C1 |
H1 |
300.0 |
180.1 |
| H2 |
C2 |
C1 |
H1A |
60.0 |
300.1 |
| H2 |
C2 |
C1 |
H1B |
180.0 |
60.0 |
| N3 |
C2 |
H2 |
H2A |
240.0 |
240.0 |
| H2A |
C2 |
C1 |
H1 |
60.0 |
300.0 |
| H2A |
C2 |
C1 |
H1A |
180.0 |
60.1 |
| H2A |
C2 |
C1 |
H1B |
300.0 |
180.0 |
| N3 |
C2 |
H2A |
H2 |
120.0 |
120.1 |
| N18 |
N17 |
C15 |
N16 |
179.7 |
179.8 |
| C15 |
N16 |
HN16 |
HN1A |
120.0 |
179.9 |
| C15 |
N16 |
HN1A |
HN16 |
240.0 |
180.1 |
| C4 |
N3 |
HN3 |
C2 |
239.7 |
180.1 |
| HN3 |
N3 |
C2 |
H2 |
24.8 |
240.0 |
| HN3 |
N3 |
C2 |
H2A |
264.8 |
120.0 |
| HN17 |
N17 |
C15 |
N16 |
359.7 |
0.1 |