PDB Chemical Component 3PG
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 3PG
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
O1 |
1.348 |
1.208 |
C1 |
O2 |
1.347 |
1.342 |
C1 |
C2 |
1.469 |
1.506 |
O2 |
HO2 |
0.950 |
0.967 |
C2 |
O3 |
1.434 |
1.429 |
C2 |
C3 |
1.531 |
1.530 |
C2 |
H2 |
1.115 |
1.090 |
O3 |
HO3 |
0.950 |
0.966 |
C3 |
O1P |
1.407 |
1.427 |
C3 |
H31 |
1.114 |
1.090 |
C3 |
H32 |
1.115 |
1.089 |
O1P |
P |
1.659 |
1.609 |
P |
O2P |
1.684 |
1.480 |
P |
O3P |
1.697 |
1.609 |
P |
O4P |
1.679 |
1.610 |
O3P |
HOP3 |
0.949 |
0.968 |
O4P |
HOP4 |
0.949 |
0.968 |
Bond Angles for 3PG
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
C1 |
O2 |
115.8 |
119.9 |
O1 |
C1 |
C2 |
125.2 |
120.1 |
O2 |
C1 |
C2 |
119.0 |
120.0 |
C1 |
O2 |
HO2 |
115.7 |
120.0 |
C1 |
C2 |
O3 |
108.3 |
109.5 |
C1 |
C2 |
C3 |
107.5 |
109.5 |
C1 |
C2 |
H2 |
113.2 |
109.4 |
O3 |
C2 |
C3 |
113.9 |
109.5 |
O3 |
C2 |
H2 |
106.6 |
109.5 |
C2 |
O3 |
HO3 |
108.3 |
106.8 |
C3 |
C2 |
H2 |
107.5 |
109.5 |
C2 |
C3 |
O1P |
110.1 |
109.5 |
C2 |
C3 |
H31 |
112.0 |
109.4 |
C2 |
C3 |
H32 |
112.0 |
109.5 |
O1P |
C3 |
H31 |
112.0 |
109.5 |
O1P |
C3 |
H32 |
112.0 |
109.5 |
C3 |
O1P |
P |
113.5 |
106.8 |
H31 |
C3 |
H32 |
98.5 |
109.5 |
O1P |
P |
O2P |
107.3 |
109.5 |
O1P |
P |
O3P |
109.4 |
109.6 |
O1P |
P |
O4P |
113.7 |
109.5 |
O2P |
P |
O3P |
105.5 |
109.4 |
O2P |
P |
O4P |
109.8 |
109.4 |
O3P |
P |
O4P |
110.8 |
109.5 |
P |
O3P |
HOP3 |
109.4 |
106.9 |
P |
O4P |
HOP4 |
113.8 |
106.8 |
Torsion Angles for 3PG
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O2 |
C1 |
O1 |
C2 |
181.9 |
180.0 |
O1 |
C1 |
O2 |
HO2 |
180.0 |
359.9 |
O1 |
C1 |
C2 |
O3 |
72.9 |
0.0 |
O1 |
C1 |
C2 |
C3 |
309.4 |
240.0 |
O1 |
C1 |
C2 |
H2 |
190.9 |
120.0 |
O1 |
C1 |
O2 |
C2 |
178.2 |
180.0 |
O2 |
C1 |
C2 |
O3 |
250.9 |
180.0 |
O2 |
C1 |
C2 |
C3 |
127.5 |
60.0 |
O2 |
C1 |
C2 |
H2 |
8.9 |
299.9 |
O1 |
C1 |
C2 |
O2 |
182.0 |
180.0 |
C2 |
C1 |
O2 |
HO2 |
1.8 |
179.9 |
O3 |
C2 |
C1 |
C3 |
123.5 |
120.0 |
O3 |
C2 |
C1 |
H2 |
242.0 |
240.0 |
C1 |
C2 |
O3 |
HO3 |
180.0 |
300.0 |
C3 |
C2 |
C1 |
H2 |
118.5 |
120.0 |
C1 |
C2 |
C3 |
O1P |
188.9 |
180.0 |
C1 |
C2 |
C3 |
H31 |
314.1 |
300.0 |
C1 |
C2 |
C3 |
H32 |
63.6 |
60.0 |
HO2 |
O2 |
C1 |
C2 |
1.8 |
179.9 |
C1 |
C2 |
O3 |
C3 |
240.5 |
240.0 |
C1 |
C2 |
O3 |
H2 |
122.1 |
120.0 |
C3 |
C2 |
O3 |
H2 |
241.6 |
240.0 |
O3 |
C2 |
C3 |
O1P |
68.9 |
60.0 |
O3 |
C2 |
C3 |
H31 |
194.2 |
180.0 |
O3 |
C2 |
C3 |
H32 |
303.7 |
300.0 |
C1 |
C2 |
C3 |
O3 |
119.9 |
120.0 |
C1 |
C2 |
C3 |
H2 |
237.8 |
240.0 |
O3 |
C2 |
C3 |
H2 |
117.9 |
120.0 |
C3 |
C2 |
O3 |
HO3 |
299.4 |
60.0 |
O1P |
C3 |
C2 |
H31 |
234.8 |
240.0 |
O1P |
C3 |
C2 |
H32 |
125.2 |
120.1 |
C2 |
C3 |
O1P |
P |
91.8 |
180.0 |
H31 |
C3 |
C2 |
H32 |
250.5 |
240.0 |
C1 |
C2 |
H2 |
O3 |
241.1 |
240.0 |
C1 |
C2 |
H2 |
C3 |
118.5 |
120.1 |
O3 |
C2 |
H2 |
C3 |
237.5 |
240.0 |
H2 |
C2 |
O3 |
HO3 |
57.9 |
180.0 |
H2 |
C2 |
C3 |
O1P |
311.0 |
300.0 |
H2 |
C2 |
C3 |
H31 |
76.3 |
60.0 |
H2 |
C2 |
C3 |
H32 |
185.8 |
180.0 |
HO3 |
O3 |
C2 |
C3 |
299.4 |
60.0 |
HO3 |
O3 |
C2 |
H2 |
57.9 |
180.0 |
O1P |
C3 |
C2 |
H2 |
311.0 |
300.0 |
C2 |
C3 |
O1P |
H31 |
125.3 |
119.9 |
C2 |
C3 |
O1P |
H32 |
234.8 |
240.0 |
H31 |
C3 |
O1P |
H32 |
109.5 |
120.0 |
C3 |
O1P |
P |
O2P |
262.6 |
59.9 |
C3 |
O1P |
P |
O3P |
16.6 |
179.9 |
C3 |
O1P |
P |
O4P |
141.0 |
300.0 |
H31 |
C3 |
C2 |
H2 |
76.3 |
60.0 |
C2 |
C3 |
H31 |
O1P |
235.8 |
240.0 |
C2 |
C3 |
H31 |
H32 |
117.9 |
120.0 |
O1P |
C3 |
H31 |
H32 |
242.1 |
239.9 |
H31 |
C3 |
O1P |
P |
326.5 |
60.0 |
H32 |
C3 |
C2 |
H2 |
185.8 |
180.0 |
C2 |
C3 |
H32 |
O1P |
124.2 |
120.0 |
C2 |
C3 |
H32 |
H31 |
242.1 |
240.0 |
O1P |
C3 |
H32 |
H31 |
117.9 |
120.0 |
H32 |
C3 |
O1P |
P |
217.0 |
300.0 |
P |
O1P |
C3 |
H31 |
326.5 |
60.0 |
P |
O1P |
C3 |
H32 |
217.0 |
300.0 |
O2P |
P |
O1P |
O3P |
246.0 |
240.0 |
O2P |
P |
O1P |
O4P |
121.6 |
119.9 |
O3P |
P |
O1P |
O4P |
235.6 |
239.9 |
O1P |
P |
O3P |
HOP3 |
180.0 |
180.0 |
O1P |
P |
O4P |
HOP4 |
180.0 |
299.9 |
O1P |
P |
O2P |
O3P |
116.6 |
120.1 |
O1P |
P |
O2P |
O4P |
235.9 |
240.1 |
O3P |
P |
O2P |
O4P |
119.4 |
119.9 |
O2P |
P |
O3P |
HOP3 |
295.1 |
300.1 |
O2P |
P |
O4P |
HOP4 |
59.8 |
179.9 |
O1P |
P |
O3P |
O2P |
244.9 |
239.9 |
O1P |
P |
O3P |
O4P |
126.1 |
120.1 |
O2P |
P |
O3P |
O4P |
241.3 |
240.1 |
O3P |
P |
O4P |
HOP4 |
303.7 |
60.0 |
O1P |
P |
O4P |
O2P |
120.2 |
120.0 |
O1P |
P |
O4P |
O3P |
236.3 |
239.9 |
O2P |
P |
O4P |
O3P |
116.1 |
119.9 |
O4P |
P |
O3P |
HOP3 |
53.8 |
59.9 |
HOP3 |
O3P |
P |
O4P |
53.8 |
59.9 |