PDB Chemical Component 3NX

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 3NX

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N5 C3 1.348 1.348
C3 O4 1.218 1.216
C3 C2 1.473 1.472
C2 C8 1.504 1.501
C2 C1 1.326 1.321
C20 C1 1.519 1.519
C20 C16 1.531 1.528
C8 C9 1.535 1.534
C1 C12 1.499 1.499
C27 C25 1.537 1.536
C27 C28 1.531 1.528
C13 C12 1.529 1.530
C9 C25 1.530 1.517
C9 C11 1.534 1.535
O18 C16 1.428 1.430
C16 C15 1.525 1.530
C24 C23 1.530 1.530
C12 C11 1.515 1.520
C12 C14 1.532 1.531
C25 C23 1.557 1.556
C28 C29 1.341 1.341
C11 C21 1.520 1.526
C15 C14 1.526 1.530
C23 C29 1.486 1.493
C23 C22 1.510 1.512
C29 C30 1.475 1.478
C21 C22 1.536 1.538
C30 C35 1.397 1.399
C30 C31 1.393 1.395
C35 C34 1.382 1.384
C31 N32 1.316 1.317
C34 C33 1.382 1.383
N32 C33 1.317 1.319
N5 H1 1.000 0.971
N5 H2 1.000 0.970
C8 H3 1.100 1.090
C8 H4 1.100 1.090
C9 H5 1.100 1.089
C11 H6 1.100 1.091
C13 H7 1.100 1.090
C13 H8 1.099 1.090
C13 H9 1.100 1.090
C14 H10 1.100 1.090
C14 H11 1.100 1.091
C15 H12 1.100 1.090
C15 H13 1.100 1.090
C16 H14 1.100 1.090
O18 H15 0.950 0.968
C20 H16 1.100 1.090
C20 H17 1.100 1.090
C21 H18 1.100 1.090
C21 H19 1.100 1.090
C22 H20 1.100 1.091
C22 H21 1.100 1.089
C24 H22 1.100 1.090
C24 H23 1.100 1.089
C24 H24 1.100 1.089
C25 H25 1.100 1.090
C27 H26 1.100 1.091
C27 H27 1.100 1.090
C28 H28 1.080 1.080
C31 H31 1.080 1.080
C33 H32 1.080 1.080
C34 H33 1.080 1.081
C35 H34 1.080 1.080

Bond Angles for 3NX

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C3 C2 C8 116.9 118.7
C2 C8 C9 111.7 109.2
C2 C8 H3 108.9 109.5
C2 C8 H4 108.9 109.5
C2 C1 C12 123.3 123.7
C20 C16 H14 109.1 109.4
C8 C9 C25 107.2 109.4
C8 C9 C11 109.3 108.2
C9 C8 H3 108.9 109.5
C9 C8 H4 108.9 109.5
C8 C9 H5 111.9 110.3
C1 C12 C11 112.9 113.4
C1 C12 C14 111.3 109.4
C27 C25 H25 111.5 112.0
C27 C28 C29 109.5 109.8
C28 C27 H26 111.5 111.0
C28 C27 H27 111.5 111.0
C27 C28 H28 125.3 125.1
C13 C12 C14 108.3 107.5
C11 C9 C25 104.4 107.3
C9 C25 C23 107.1 106.4
C25 C9 H5 111.9 110.3
C9 C25 H25 111.5 111.3
C9 C11 C21 111.5 112.3
C11 C9 H5 111.8 111.2
C9 C11 H6 108.0 108.3
O18 C16 H14 110.5 109.4
C16 C15 H12 109.8 109.4
C16 C15 H13 109.8 109.5
C24 C23 C29 108.7 109.3
C12 C11 C21 109.2 109.6
C12 C11 H6 108.2 107.7
C12 C14 H10 109.2 109.5
C12 C14 H11 109.2 109.5
C25 C23 C29 102.0 103.1
C23 C29 C28 108.5 108.6
C28 C29 C30 126.6 125.7
C29 C28 H28 125.2 125.1
C11 C21 C22 110.3 112.1
C21 C11 H6 108.1 108.2
C11 C21 H18 109.3 109.0
C11 C21 H19 109.2 108.9
C15 C14 H10 109.1 109.5
C15 C14 H11 109.2 109.5
C23 C29 C30 124.3 125.7
C23 C22 H20 110.2 110.0
C23 C22 H21 110.2 110.1
C29 C30 C35 119.7 120.5
C29 C30 C31 121.2 120.6
C22 C21 H18 109.3 108.9
C22 C21 H19 109.2 108.9
C21 C22 H20 110.2 110.0
C21 C22 H21 110.2 110.0
C31 C30 C35 119.1 118.9
C30 C35 C34 118.4 118.3
C30 C35 H34 120.8 120.9
C30 C31 N32 120.0 120.6
C30 C31 H31 120.0 119.7
C35 C34 H33 120.4 120.3
C31 N32 C33 122.5 121.9
N32 C31 H31 120.0 119.7
C34 C33 H32 119.6 119.5
N32 C33 H32 119.7 119.4
H1 N5 H2 120.0 120.0
H3 C8 H4 109.5 109.5
H7 C13 H8 109.5 109.4
H7 C13 H9 109.5 109.5
H8 C13 H9 109.5 109.5
H10 C14 H11 109.5 109.5
H12 C15 H13 109.5 109.5
H16 C20 H17 109.5 109.8
H18 C21 H19 109.5 108.9
H20 C22 H21 109.5 110.0
H22 C24 H23 109.5 109.5
H22 C24 H24 109.5 109.5
H23 C24 H24 109.5 109.5
H26 C27 H27 109.5 110.8

Torsion Angles for 3NX

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
N5 C3 C2 C8 61.5 100.2
O4 C3 C2 C8 242.2 280.2
C3 C2 C8 C9 199.2 206.5
C3 C2 C8 H3 319.5 326.4
C3 C2 C8 H4 78.8 86.5
C3 C2 C1 C12 180.0 179.6
C8 C2 C1 C12 0.2 359.6
C2 C8 C9 C25 199.5 187.0
C2 C8 C9 C11 312.1 303.6
C9 C8 C2 H3 239.7 240.1
C9 C8 C2 H4 120.3 120.0
C2 C8 C9 H5 76.4 65.5
H3 C8 C2 H4 240.6 239.9
C2 C1 C12 C11 11.3 5.7
C2 C1 C12 C14 133.1 128.9
O18 C16 C20 H14 121.8 120.0
C20 C16 C15 H12 188.8 303.7
C20 C16 C15 H13 309.2 183.7
C2 C8 C9 H3 120.3 119.9
C2 C8 C9 H4 239.7 240.0
C11 C9 C8 C25 112.6 116.6
C8 C9 C25 C23 181.1 181.9
C25 C9 C8 H5 123.1 121.5
C8 C9 C25 H25 59.2 60.1
C8 C9 C11 C21 183.3 186.0
C11 C9 C8 H5 235.6 238.1
C8 C9 C11 H6 301.9 305.5
H3 C8 C9 H4 119.3 120.1
C13 C12 C1 C14 118.8 116.8
C1 C12 C11 C21 194.5 198.7
C1 C12 C11 H6 77.0 81.1
C1 C12 C14 H10 168.5 174.2
C1 C12 C14 H11 288.1 294.2
C27 C25 C9 H5 52.2 51.6
C9 C25 C27 H25 130.0 129.7
C27 C25 C23 C29 43.8 40.7
C28 C27 C25 H25 76.1 78.3
C23 C29 C28 C27 4.8 1.3
C27 C28 C29 C30 176.3 181.3
C29 C28 C27 H28 180.0 180.0
H26 C27 C28 H27 122.7 123.7
C1 C12 C13 C14 239.3 241.9
C13 C12 C11 C21 313.8 318.6
C13 C12 C11 H6 196.3 201.1
C13 C12 C14 H10 49.9 56.9
C13 C12 C14 H11 169.5 177.0
C8 C9 C25 C11 115.8 117.2
C25 C9 C8 H3 79.2 67.1
C25 C9 C8 H4 319.8 307.0
C8 C9 C25 H5 237.0 238.5
C27 C25 C9 H25 230.0 229.9
C25 C9 C11 C21 297.7 304.0
C11 C9 C25 H5 121.1 121.3
C25 C9 C11 H6 56.3 63.4
C9 C25 C23 C29 165.1 161.5
C8 C9 C11 C25 245.6 242.1
C11 C9 C8 H3 191.8 183.6
C11 C9 C8 H4 72.4 63.5
C8 C9 C11 H5 124.4 121.3
C1 C12 C11 C9 318.3 323.0
C11 C9 C25 C23 65.2 64.7
C25 C9 C11 H5 238.8 239.3
C11 C9 C25 H25 303.4 302.9
C12 C11 C9 C21 237.5 237.2
C12 C11 C9 H6 118.8 117.7
C9 C11 C21 C22 60.1 52.4
C21 C11 C9 H6 241.4 240.5
C9 C11 C21 H18 180.2 173.1
C9 C11 C21 H19 300.0 291.8
C20 C16 O18 H14 239.0 240.1
O18 C16 C15 H12 309.1 63.8
O18 C16 C15 H13 69.6 303.8
C16 C15 C14 H10 179.1 177.2
C16 C15 C14 H11 59.4 57.2
H12 C15 C16 H13 239.5 120.0
C9 C25 C23 C24 50.3 45.7
C25 C23 C24 C29 110.4 111.7
C24 C23 C29 C28 83.5 88.0
C24 C23 C29 C30 271.8 268.0
C24 C23 C22 H20 63.5 189.0
C24 C23 C22 H21 184.4 67.6
C1 C12 C11 C14 123.6 122.9
C12 C11 C9 C25 175.2 181.2
C9 C11 C12 C21 123.8 124.3
C12 C11 C9 H5 296.4 301.9
C9 C11 C12 H6 241.3 241.9
C12 C11 C21 C22 184.0 175.8
C21 C11 C12 H6 117.5 117.5
C12 C11 C21 H18 304.2 296.4
C12 C11 C21 H19 63.9 55.1
C1 C12 C14 C11 235.4 234.8
C14 C12 C11 C21 70.8 75.8
C14 C12 C11 H6 313.4 318.2
C15 C14 C12 H10 239.8 240.0
C15 C14 C12 H11 120.2 120.0
H10 C14 C12 H11 240.4 240.0
C23 C25 C9 H5 304.1 303.4
C9 C25 C23 H25 237.9 238.5
C24 C23 C25 C29 245.2 244.2
C25 C23 C29 C28 328.4 332.6
C25 C23 C29 C30 156.8 152.7
C25 C23 C22 H20 182.5 306.4
C25 C23 C22 H21 303.5 185.0
C29 C28 C27 H26 265.4 267.4
C29 C28 C27 H27 142.7 143.6
C27 C28 C29 H28 180.0 180.0
C23 C29 C28 C30 188.6 180.0
C28 C29 C30 C35 231.1 65.0
C28 C29 C30 C31 51.3 245.3
C21 C11 C9 C25 297.7 304.0
C21 C11 C9 H5 58.9 64.7
C9 C11 C21 H6 118.5 119.5
C12 C11 C21 H6 242.5 242.8
C22 C21 C11 H18 239.9 239.4
C22 C21 C11 H19 120.1 120.6
C11 C21 C22 H20 182.2 62.8
C11 C21 C22 H21 61.2 184.1
H18 C21 C11 H19 240.3 241.3
C12 C14 C15 H10 120.2 120.0
C12 C14 C15 H11 239.8 240.0
H10 C14 C15 H11 119.6 120.0
C27 C28 C29 C23 4.8 1.3
C28 C29 C23 C30 171.7 180.0
C23 C29 C28 H28 184.8 181.3
C29 C23 C22 H20 298.0 62.5
C29 C23 C22 H21 58.9 301.1
C23 C29 C30 C35 41.3 245.0
C23 C29 C30 C31 221.5 65.3
C9 C25 C23 C22 290.7 287.9
C23 C22 C21 H18 181.6 182.9
C23 C22 C21 H19 61.8 64.2
C21 C22 C23 H20 240.5 119.3
C21 C22 C23 H21 119.5 240.7
H20 C22 C23 H21 239.1 121.4
C23 C29 C30 C28 170.2 180.0
C30 C29 C28 H28 356.3 1.3
C31 C30 C29 C35 180.2 180.3
C29 C30 C35 C34 180.1 179.7
C29 C30 C35 H34 0.1 0.0
C29 C30 C31 N32 179.9 180.0
C29 C30 C31 H31 360.0 0.0
C22 C21 C11 H6 301.5 292.9
C11 C21 C22 H18 120.1 120.7
C11 C21 C22 H19 239.9 239.4
C23 C22 C21 H20 119.5 240.8
C23 C22 C21 H21 240.5 119.4
H18 C21 C22 H19 119.7 118.7
H20 C22 C21 H21 120.9 238.6
C29 C30 C35 C31 180.2 180.3
C35 C30 C31 N32 0.2 0.2
C35 C30 C31 H31 180.2 180.3
C30 C35 C34 H33 180.0 180.3
C29 C30 C31 C35 179.8 179.7
C31 C30 C35 C34 359.8 359.5
C31 C30 C35 H34 179.8 179.8
C30 C31 N32 C33 0.0 0.0
N32 C31 C30 H31 180.0 179.9
C30 C35 C34 H34 180.0 180.3
C35 C34 C33 H32 180.2 179.8
N32 C31 C30 C35 0.2 0.2
C30 C31 N32 H31 180.0 180.1
C31 N32 C33 H32 179.8 179.9
C30 C35 C34 C33 360.0 0.6
N32 C33 C34 H32 180.0 180.0
C33 N32 C31 H31 180.0 180.0
C34 C33 N32 H32 180.0 180.0
C2 C8 H3 C9 238.0 240.2
C2 C8 H3 H4 119.0 120.1
H3 C8 C9 C25 79.2 67.1
H3 C8 C9 C11 191.8 183.6
C9 C8 H3 H4 241.0 239.9
H3 C8 C9 H5 316.1 305.5
C2 C8 H4 C9 122.0 119.8
C2 C8 H4 H3 241.0 239.9
H4 C8 C9 C25 319.8 307.0
H4 C8 C9 C11 72.4 63.5
C9 C8 H4 H3 119.0 120.1
H4 C8 C9 H5 196.8 185.4
C8 C9 H5 C25 120.4 121.0
C8 C9 H5 C11 237.1 239.9
H5 C9 C8 H3 316.1 305.5
H5 C9 C8 H4 196.8 185.4
C11 C9 H5 C25 243.3 241.1
H5 C9 C25 C23 304.1 303.4
H5 C9 C25 H25 182.2 181.6
H5 C9 C11 C21 58.9 64.7
H5 C9 C11 H6 177.5 184.2
H6 C11 C9 C25 56.3 63.4
C9 C11 H6 C21 239.2 238.0
H6 C11 C9 H5 177.5 184.2
C12 C11 H6 C21 118.2 118.4
H6 C11 C21 C22 301.5 292.9
H6 C11 C21 H18 61.7 53.6
H6 C11 C21 H19 181.4 172.3
H7 C13 C12 C14 300.7 185.7
H8 C13 H7 H9 120.0 120.1
H8 C13 C12 C14 60.7 305.7
H7 C13 H8 H9 240.0 240.0
H9 C13 C12 C14 180.7 65.8
H7 C13 H9 H8 120.0 120.0
C12 C14 H10 H11 119.4 120.0
C15 C14 H10 H11 240.5 240.0
C12 C14 H11 H10 240.6 239.9
C15 C14 H11 H10 119.4 120.0
C16 C15 H12 H13 120.7 240.0
H12 C15 C14 H10 59.3 297.2
H12 C15 C14 H11 299.7 177.2
C16 C15 H13 H12 239.3 120.0
H13 C15 C14 H10 298.8 57.1
H13 C15 C14 H11 179.2 297.1
H14 C16 C15 H12 70.2 183.7
H14 C16 C15 H13 190.7 63.7
H15 O18 C16 H14 301.0 300.0
H16 C20 C16 H14 296.7 305.1
H17 C20 C16 H14 175.7 184.7
C11 C21 H18 C22 239.2 237.4
H18 C21 C11 H6 61.7 53.6
C11 C21 H18 H19 119.6 118.7
C22 C21 H18 H19 240.4 241.3
H18 C21 C22 H20 62.0 302.1
H18 C21 C22 H21 301.1 63.5
C11 C21 H19 C22 120.8 122.6
H19 C21 C11 H6 181.4 172.3
C11 C21 H19 H18 240.4 241.2
C22 C21 H19 H18 119.6 118.7
H19 C21 C22 H20 302.3 183.4
H19 C21 C22 H21 181.4 304.8
C23 C22 H20 H21 121.3 238.6
H20 C22 C21 H18 62.0 302.1
H20 C22 C21 H19 302.3 183.4
C21 C22 H20 H21 238.7 121.3
C23 C22 H21 H20 238.7 121.3
H21 C22 C21 H18 301.1 63.5
H21 C22 C21 H19 181.4 304.8
C21 C22 H21 H20 121.4 238.7
H22 C24 C23 C29 69.6 65.6
H23 C24 H22 H24 120.0 120.1
H23 C24 C23 C29 189.6 185.5
H22 C24 H23 H24 240.0 240.0
H24 C24 C23 C29 309.6 305.6
H22 C24 H24 H23 120.0 120.0
C9 C25 H25 C23 119.5 118.7
H25 C25 C9 H5 182.2 181.6
H25 C25 C23 C29 287.2 283.1
H26 C27 C25 H25 194.8 196.4
H26 C27 C28 C29 265.4 267.4
C28 C27 H26 H27 236.2 236.2
H26 C27 C28 H28 85.4 87.3
H27 C27 C25 H25 317.4 320.1
H27 C27 C28 C29 142.7 143.6
C28 C27 H27 H26 123.8 123.8
H27 C27 C28 H28 322.7 323.6
C27 C28 H28 C29 180.0 180.0
H28 C28 C27 H26 85.4 87.3
H28 C28 C27 H27 322.7 323.6
H28 C28 C29 C30 356.3 1.3
H31 C31 C30 C35 180.2 180.3
C30 C31 H31 N32 180.0 179.9
H31 C31 N32 C33 180.0 180.0
H33 C34 C33 H32 0.2 0.0
C30 C35 H34 C34 180.0 179.7
H34 C35 C34 H33 360.0 0.0