PDB Chemical Component 3NE
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 3NE
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C6 |
C4 |
1.375 |
1.394 |
| C4 |
C7 |
1.369 |
1.380 |
| C4 |
H4 |
1.079 |
1.080 |
| C9 |
C5 |
1.394 |
1.406 |
| C5 |
C8 |
1.380 |
1.360 |
| C5 |
H5 |
1.080 |
1.080 |
| C11 |
C6 |
1.465 |
1.483 |
| C6 |
C2 |
1.379 |
1.394 |
| C7 |
C3 |
1.372 |
1.383 |
| C7 |
C13 |
1.486 |
1.507 |
| C10 |
C8 |
1.403 |
1.410 |
| C8 |
C14 |
1.484 |
1.508 |
| C12 |
C10 |
1.392 |
1.395 |
| C10 |
C11 |
1.442 |
1.466 |
| C13 |
F21 |
1.370 |
1.399 |
| C13 |
F20 |
1.364 |
1.399 |
| C13 |
F19 |
1.337 |
1.399 |
| C2 |
C1 |
1.376 |
1.380 |
| C1 |
C3 |
1.349 |
1.384 |
| C1 |
H1 |
1.080 |
1.080 |
| C2 |
H2 |
1.080 |
1.080 |
| C3 |
H3 |
1.080 |
1.080 |
| N16 |
C9 |
1.330 |
1.346 |
| O18 |
C9 |
1.359 |
1.219 |
| N17 |
C11 |
1.330 |
1.313 |
| N16 |
C12 |
1.361 |
1.370 |
| N15 |
C12 |
1.378 |
1.356 |
| C14 |
F23 |
1.363 |
1.399 |
| C14 |
F22 |
1.339 |
1.399 |
| C14 |
F24 |
1.334 |
1.399 |
| N15 |
N17 |
1.317 |
1.398 |
| N16 |
HN16 |
1.000 |
0.970 |
| N15 |
HN15 |
1.001 |
0.970 |
Bond Angles for 3NE
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C6 |
C4 |
C7 |
117.8 |
119.9 |
| C6 |
C4 |
H4 |
121.1 |
120.1 |
| C7 |
C4 |
H4 |
121.1 |
120.1 |
| C4 |
C7 |
C3 |
124.2 |
120.1 |
| C4 |
C7 |
C13 |
120.7 |
119.9 |
| C9 |
C5 |
H5 |
119.9 |
120.1 |
| C8 |
C5 |
H5 |
119.9 |
120.0 |
| C5 |
C8 |
C14 |
120.9 |
120.5 |
| C6 |
C2 |
C1 |
123.0 |
119.8 |
| C6 |
C2 |
H2 |
118.5 |
120.1 |
| C13 |
C7 |
C3 |
115.1 |
119.9 |
| C7 |
C3 |
C1 |
117.9 |
120.3 |
| C7 |
C3 |
H3 |
121.1 |
119.9 |
| C7 |
C13 |
F21 |
124.7 |
109.4 |
| C7 |
C13 |
F20 |
108.3 |
109.5 |
| C7 |
C13 |
F19 |
107.9 |
109.5 |
| C10 |
C8 |
C14 |
123.8 |
120.4 |
| C8 |
C14 |
F23 |
117.0 |
109.4 |
| C8 |
C14 |
F22 |
117.5 |
109.5 |
| C8 |
C14 |
F24 |
110.5 |
109.4 |
| F20 |
C13 |
F21 |
101.4 |
109.5 |
| F19 |
C13 |
F21 |
105.0 |
109.5 |
| F19 |
C13 |
F20 |
108.8 |
109.5 |
| C2 |
C1 |
C3 |
119.1 |
120.1 |
| C2 |
C1 |
H1 |
120.4 |
119.9 |
| C3 |
C1 |
H1 |
120.4 |
119.9 |
| C1 |
C3 |
H3 |
121.0 |
119.9 |
| F22 |
C14 |
F23 |
107.5 |
109.5 |
| F23 |
C14 |
F24 |
100.7 |
109.5 |
| F22 |
C14 |
F24 |
101.2 |
109.5 |
| N17 |
N15 |
HN15 |
121.8 |
125.2 |
Torsion Angles for 3NE
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C7 |
C4 |
C6 |
H4 |
180.0 |
180.3 |
| C6 |
C4 |
C7 |
C3 |
358.9 |
359.7 |
| C6 |
C4 |
C7 |
C13 |
178.3 |
179.8 |
| C6 |
C4 |
C7 |
H4 |
180.0 |
179.7 |
| C13 |
C7 |
C4 |
C3 |
179.4 |
180.0 |
| C4 |
C7 |
C3 |
C1 |
1.6 |
0.5 |
| C4 |
C7 |
C3 |
H3 |
181.6 |
180.0 |
| C4 |
C7 |
C13 |
F21 |
359.4 |
90.0 |
| C4 |
C7 |
C13 |
F20 |
240.6 |
330.0 |
| C4 |
C7 |
C13 |
F19 |
123.1 |
210.0 |
| C6 |
C4 |
H4 |
C7 |
180.0 |
180.3 |
| H4 |
C4 |
C7 |
C3 |
178.9 |
180.0 |
| H4 |
C4 |
C7 |
C13 |
358.3 |
0.1 |
| C8 |
C5 |
C9 |
H5 |
180.0 |
179.6 |
| C9 |
C5 |
C8 |
C14 |
179.5 |
180.3 |
| C9 |
C5 |
C8 |
H5 |
180.0 |
180.4 |
| C10 |
C8 |
C5 |
C14 |
181.4 |
180.1 |
| C5 |
C8 |
C14 |
F23 |
146.2 |
338.4 |
| C5 |
C8 |
C14 |
F22 |
16.0 |
218.3 |
| C5 |
C8 |
C14 |
F24 |
260.6 |
98.3 |
| H5 |
C5 |
C8 |
C14 |
359.5 |
359.8 |
| C11 |
C6 |
C4 |
H4 |
1.5 |
359.7 |
| C11 |
C6 |
C2 |
H2 |
359.8 |
360.0 |
| C2 |
C6 |
C4 |
C7 |
359.3 |
0.0 |
| C2 |
C6 |
C4 |
H4 |
179.3 |
179.7 |
| C6 |
C2 |
C1 |
C3 |
358.4 |
0.3 |
| C6 |
C2 |
C1 |
H1 |
178.4 |
179.7 |
| C3 |
C7 |
C4 |
H4 |
178.9 |
180.0 |
| C4 |
C7 |
C3 |
C13 |
179.4 |
180.0 |
| C3 |
C7 |
C13 |
F21 |
178.8 |
270.0 |
| C3 |
C7 |
C13 |
F20 |
60.1 |
150.0 |
| C3 |
C7 |
C13 |
F19 |
302.6 |
30.0 |
| C2 |
C1 |
C3 |
C7 |
359.8 |
359.4 |
| C7 |
C3 |
C1 |
H1 |
179.7 |
180.1 |
| C1 |
C3 |
C7 |
H3 |
180.0 |
180.5 |
| C13 |
C7 |
C4 |
H4 |
358.3 |
0.1 |
| C4 |
C7 |
C13 |
C3 |
180.5 |
180.0 |
| C13 |
C7 |
C3 |
C1 |
182.2 |
180.5 |
| C13 |
C7 |
C3 |
H3 |
2.1 |
360.0 |
| F20 |
C13 |
C7 |
F21 |
241.3 |
240.0 |
| F19 |
C13 |
C7 |
F21 |
123.7 |
120.0 |
| F19 |
C13 |
C7 |
F20 |
242.4 |
240.0 |
| C10 |
C8 |
C5 |
H5 |
180.9 |
179.9 |
| C5 |
C8 |
C10 |
C14 |
178.6 |
179.9 |
| C10 |
C8 |
C14 |
F23 |
324.6 |
158.3 |
| C10 |
C8 |
C14 |
F22 |
194.4 |
38.2 |
| C10 |
C8 |
C14 |
F24 |
79.1 |
278.2 |
| C14 |
C8 |
C5 |
H5 |
359.5 |
359.8 |
| F22 |
C14 |
C8 |
F23 |
229.8 |
240.0 |
| F23 |
C14 |
C8 |
F24 |
245.6 |
240.0 |
| F22 |
C14 |
C8 |
F24 |
115.4 |
120.0 |
| C12 |
C10 |
C8 |
C14 |
180.3 |
180.0 |
| C11 |
C10 |
C8 |
C14 |
2.1 |
0.1 |
| F21 |
C13 |
C7 |
C3 |
178.8 |
270.0 |
| C7 |
C13 |
F21 |
F20 |
238.1 |
240.0 |
| C7 |
C13 |
F21 |
F19 |
125.0 |
120.0 |
| F19 |
C13 |
F21 |
F20 |
113.2 |
120.0 |
| F20 |
C13 |
C7 |
C3 |
60.1 |
150.0 |
| C7 |
C13 |
F20 |
F21 |
132.7 |
120.0 |
| C7 |
C13 |
F20 |
F19 |
243.0 |
240.0 |
| F19 |
C13 |
F20 |
F21 |
249.7 |
240.0 |
| F19 |
C13 |
C7 |
C3 |
302.6 |
30.0 |
| C7 |
C13 |
F19 |
F21 |
225.1 |
240.0 |
| C7 |
C13 |
F19 |
F20 |
117.2 |
120.0 |
| F20 |
C13 |
F19 |
F21 |
107.8 |
120.0 |
| C6 |
C2 |
C1 |
H2 |
180.0 |
180.0 |
| C7 |
C3 |
C1 |
C2 |
359.8 |
359.4 |
| C3 |
C1 |
C2 |
H1 |
180.0 |
180.6 |
| C2 |
C1 |
C3 |
H3 |
179.8 |
180.0 |
| C7 |
C3 |
C1 |
H3 |
180.0 |
179.5 |
| C2 |
C1 |
C3 |
H1 |
180.0 |
179.4 |
| C2 |
C1 |
H1 |
C3 |
180.0 |
180.6 |
| H1 |
C1 |
C3 |
H3 |
359.7 |
0.6 |
| C6 |
C2 |
H2 |
C1 |
180.0 |
180.0 |
| H2 |
C2 |
C1 |
C3 |
178.4 |
180.3 |
| H2 |
C2 |
C1 |
H1 |
358.4 |
359.7 |
| C7 |
C3 |
H3 |
C1 |
180.0 |
180.5 |
| H3 |
C3 |
C1 |
H1 |
359.7 |
0.6 |
| N16 |
C9 |
C5 |
H5 |
180.1 |
180.3 |
| O18 |
C9 |
C5 |
H5 |
360.0 |
0.3 |
| C8 |
C14 |
F23 |
F22 |
225.2 |
240.0 |
| C8 |
C14 |
F23 |
F24 |
119.8 |
120.0 |
| F22 |
C14 |
F23 |
F24 |
254.6 |
240.0 |
| C8 |
C14 |
F22 |
F23 |
134.5 |
120.0 |
| C8 |
C14 |
F22 |
F24 |
239.6 |
240.0 |
| F23 |
C14 |
F22 |
F24 |
105.1 |
120.0 |
| C8 |
C14 |
F24 |
F23 |
235.6 |
240.1 |
| C8 |
C14 |
F24 |
F22 |
125.2 |
120.0 |
| F22 |
C14 |
F24 |
F23 |
110.4 |
120.0 |