PDB Chemical Component 3LZ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 3LZ
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O25 |
C24 |
1.229 |
1.216 |
| C24 |
N7 |
1.335 |
1.348 |
| C24 |
N26 |
1.330 |
1.348 |
| C27 |
N26 |
1.466 |
1.465 |
| N7 |
C4 |
1.411 |
1.398 |
| C19 |
N20 |
1.351 |
1.319 |
| C19 |
C18 |
1.410 |
1.383 |
| N20 |
C21 |
1.351 |
1.318 |
| C18 |
C17 |
1.415 |
1.385 |
| C22 |
C21 |
1.525 |
1.507 |
| C22 |
C23 |
1.540 |
1.529 |
| C21 |
C9 |
1.413 |
1.387 |
| C17 |
C9 |
1.410 |
1.392 |
| C9 |
O8 |
1.370 |
1.359 |
| O8 |
C3 |
1.368 |
1.360 |
| C4 |
C3 |
1.410 |
1.395 |
| C4 |
N5 |
1.346 |
1.322 |
| C3 |
C2 |
1.402 |
1.387 |
| N5 |
C6 |
1.353 |
1.320 |
| C2 |
C1 |
1.407 |
1.393 |
| C6 |
C1 |
1.408 |
1.388 |
| C1 |
S10 |
1.746 |
1.763 |
| C13 |
C12 |
1.407 |
1.383 |
| C13 |
C14 |
1.411 |
1.389 |
| C12 |
C11 |
1.410 |
1.392 |
| C14 |
C15 |
1.414 |
1.381 |
| C11 |
S10 |
1.771 |
1.761 |
| C11 |
N16 |
1.354 |
1.325 |
| C15 |
N16 |
1.357 |
1.319 |
| C18 |
H1 |
1.080 |
1.080 |
| C14 |
H2 |
1.080 |
1.079 |
| C13 |
H3 |
1.080 |
1.080 |
| C12 |
H4 |
1.080 |
1.081 |
| C17 |
H5 |
1.080 |
1.080 |
| C15 |
H6 |
1.080 |
1.080 |
| C22 |
H7 |
1.100 |
1.090 |
| C22 |
H8 |
1.100 |
1.091 |
| C6 |
H9 |
1.080 |
1.080 |
| C19 |
H10 |
1.080 |
1.079 |
| C2 |
H11 |
1.080 |
1.080 |
| N7 |
H12 |
1.000 |
0.969 |
| C23 |
H13 |
1.100 |
1.090 |
| C23 |
H14 |
1.100 |
1.090 |
| C23 |
H15 |
1.100 |
1.090 |
| N26 |
H16 |
1.000 |
0.970 |
| C27 |
H17 |
1.100 |
1.090 |
| C27 |
H18 |
1.100 |
1.090 |
| C27 |
H19 |
1.100 |
1.091 |
Bond Angles for 3LZ
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O25 |
C24 |
N26 |
120.9 |
120.0 |
| C24 |
N7 |
H12 |
113.6 |
120.0 |
| C24 |
N26 |
H16 |
118.8 |
120.0 |
| C27 |
N26 |
H16 |
118.9 |
120.0 |
| C19 |
N20 |
C21 |
119.2 |
121.8 |
| N20 |
C19 |
H10 |
118.5 |
119.6 |
| C19 |
C18 |
H1 |
120.9 |
120.4 |
| C18 |
C17 |
C9 |
118.9 |
118.4 |
| C17 |
C18 |
H1 |
121.0 |
120.4 |
| C18 |
C17 |
H5 |
120.5 |
120.8 |
| C21 |
C22 |
C23 |
114.6 |
109.5 |
| C22 |
C21 |
C9 |
121.9 |
119.6 |
| C21 |
C22 |
H7 |
108.2 |
109.4 |
| C21 |
C22 |
H8 |
108.2 |
109.5 |
| C23 |
C22 |
H7 |
108.2 |
109.5 |
| C23 |
C22 |
H8 |
108.2 |
109.5 |
| C22 |
C23 |
H13 |
109.5 |
109.5 |
| C22 |
C23 |
H14 |
109.5 |
109.5 |
| C22 |
C23 |
H15 |
109.5 |
109.5 |
| C17 |
C9 |
C21 |
118.8 |
119.0 |
| C21 |
C9 |
O8 |
119.8 |
120.5 |
| C17 |
C9 |
O8 |
121.3 |
120.5 |
| C9 |
C17 |
H5 |
120.6 |
120.8 |
| C4 |
C3 |
C2 |
119.3 |
119.0 |
| C3 |
C2 |
H11 |
121.4 |
120.8 |
| N5 |
C6 |
C1 |
122.9 |
120.8 |
| N5 |
C6 |
H9 |
118.5 |
119.6 |
| C2 |
C1 |
S10 |
121.1 |
120.4 |
| C6 |
C1 |
S10 |
119.1 |
120.4 |
| C1 |
C6 |
H9 |
118.5 |
119.6 |
| C11 |
S10 |
C1 |
101.7 |
103.0 |
| C13 |
C12 |
C11 |
119.2 |
119.1 |
| C12 |
C13 |
H3 |
120.7 |
120.8 |
| C13 |
C12 |
H4 |
120.4 |
120.5 |
| C13 |
C14 |
C15 |
118.4 |
119.3 |
| C13 |
C14 |
H2 |
120.8 |
120.3 |
| C12 |
C11 |
S10 |
123.5 |
119.7 |
| C12 |
C11 |
N16 |
122.4 |
120.5 |
| C11 |
C12 |
H4 |
120.4 |
120.4 |
| C14 |
C15 |
N16 |
122.9 |
120.8 |
| C15 |
C14 |
H2 |
120.8 |
120.3 |
| C14 |
C15 |
H6 |
118.6 |
119.5 |
| S10 |
C11 |
N16 |
114.1 |
119.8 |
| C15 |
N16 |
C11 |
118.5 |
121.7 |
| N16 |
C15 |
H6 |
118.6 |
119.6 |
| H7 |
C22 |
H8 |
109.5 |
109.4 |
| H13 |
C23 |
H14 |
109.5 |
109.4 |
| H13 |
C23 |
H15 |
109.5 |
109.5 |
| H14 |
C23 |
H15 |
109.4 |
109.5 |
| H17 |
C27 |
H18 |
109.5 |
109.5 |
| H17 |
C27 |
H19 |
109.5 |
109.5 |
| H18 |
C27 |
H19 |
109.5 |
109.4 |
Torsion Angles for 3LZ
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O25 |
C24 |
N7 |
H12 |
358.4 |
180.0 |
| O25 |
C24 |
N26 |
H16 |
192.3 |
180.1 |
| N26 |
C24 |
N7 |
H12 |
176.5 |
0.0 |
| C27 |
N26 |
C24 |
H16 |
180.0 |
179.9 |
| C24 |
N26 |
C27 |
H16 |
180.0 |
180.1 |
| N20 |
C19 |
C18 |
H1 |
180.1 |
180.3 |
| C19 |
C18 |
C17 |
C9 |
0.7 |
0.2 |
| C17 |
C18 |
C19 |
H1 |
180.0 |
179.7 |
| C19 |
C18 |
C17 |
H5 |
180.7 |
180.2 |
| C21 |
N20 |
C19 |
H10 |
179.7 |
179.5 |
| N20 |
C21 |
C22 |
C23 |
67.5 |
270.5 |
| N20 |
C21 |
C22 |
H7 |
188.2 |
30.5 |
| N20 |
C21 |
C22 |
H8 |
306.7 |
150.5 |
| C19 |
C18 |
C17 |
H1 |
180.0 |
180.3 |
| C18 |
C17 |
C9 |
C21 |
358.7 |
0.0 |
| C18 |
C17 |
C9 |
O8 |
181.4 |
179.9 |
| C9 |
C17 |
C18 |
H5 |
180.0 |
180.0 |
| C19 |
N20 |
C21 |
C22 |
179.7 |
180.3 |
| C23 |
C22 |
C21 |
H7 |
239.2 |
240.0 |
| C23 |
C22 |
C21 |
H8 |
120.8 |
120.0 |
| C21 |
C22 |
C23 |
H13 |
180.0 |
180.0 |
| C21 |
C22 |
C23 |
H14 |
300.0 |
300.0 |
| C21 |
C22 |
C23 |
H15 |
60.0 |
60.0 |
| C17 |
C9 |
C21 |
C22 |
181.1 |
180.0 |
| C22 |
C21 |
C9 |
O8 |
358.5 |
0.1 |
| H7 |
C22 |
C21 |
H8 |
241.5 |
240.1 |
| C23 |
C22 |
C21 |
C9 |
247.5 |
90.0 |
| C21 |
C22 |
C23 |
H7 |
120.8 |
120.0 |
| C21 |
C22 |
C23 |
H8 |
239.2 |
240.0 |
| H7 |
C22 |
C23 |
H8 |
118.5 |
120.0 |
| H13 |
C23 |
C22 |
H14 |
240.0 |
240.1 |
| H13 |
C23 |
C22 |
H15 |
120.0 |
120.0 |
| H14 |
C23 |
C22 |
H15 |
240.0 |
240.0 |
| C19 |
N20 |
C21 |
C9 |
359.7 |
0.8 |
| C9 |
C21 |
C22 |
C23 |
247.5 |
90.0 |
| C9 |
C21 |
C22 |
H7 |
8.3 |
210.0 |
| C9 |
C21 |
C22 |
H8 |
126.8 |
330.0 |
| C17 |
C9 |
C21 |
O8 |
182.6 |
179.9 |
| C21 |
C9 |
C17 |
H5 |
178.7 |
180.0 |
| C9 |
C17 |
C18 |
H1 |
180.7 |
179.9 |
| C18 |
C17 |
C9 |
H5 |
180.0 |
180.0 |
| C22 |
C21 |
C9 |
C17 |
181.1 |
180.0 |
| C21 |
C9 |
C17 |
O8 |
177.3 |
180.1 |
| C17 |
C9 |
O8 |
C21 |
177.3 |
180.1 |
| O8 |
C9 |
C17 |
H5 |
1.4 |
359.9 |
| C21 |
C9 |
O8 |
C3 |
130.2 |
175.7 |
| C17 |
C9 |
O8 |
C3 |
307.5 |
355.8 |
| O8 |
C3 |
C2 |
H11 |
1.3 |
0.1 |
| C4 |
C3 |
C2 |
H11 |
179.0 |
180.0 |
| C4 |
N5 |
C6 |
H9 |
180.1 |
180.0 |
| C3 |
C2 |
C1 |
S10 |
180.3 |
180.1 |
| N5 |
C6 |
C1 |
S10 |
180.1 |
179.9 |
| C1 |
C6 |
N5 |
H9 |
180.0 |
180.1 |
| C6 |
C1 |
C2 |
S10 |
180.5 |
180.0 |
| C2 |
C1 |
C6 |
H9 |
179.7 |
180.0 |
| C11 |
S10 |
C1 |
C2 |
55.5 |
274.2 |
| N5 |
C6 |
C1 |
H9 |
180.0 |
179.9 |
| C2 |
C1 |
C6 |
S10 |
179.5 |
180.0 |
| C11 |
S10 |
C1 |
C6 |
235.0 |
94.2 |
| S10 |
C1 |
C6 |
H9 |
0.2 |
360.0 |
| C12 |
C11 |
S10 |
C1 |
18.3 |
173.9 |
| C1 |
S10 |
C11 |
N16 |
197.2 |
353.6 |
| C12 |
C13 |
C14 |
C15 |
0.1 |
359.9 |
| C12 |
C13 |
C14 |
H2 |
180.2 |
179.7 |
| C13 |
C12 |
C11 |
S10 |
180.3 |
180.0 |
| C13 |
C12 |
C11 |
N16 |
1.5 |
0.2 |
| C11 |
C12 |
C13 |
H4 |
180.0 |
180.1 |
| C13 |
C14 |
C15 |
N16 |
0.1 |
359.8 |
| C15 |
C14 |
C13 |
H2 |
180.0 |
180.3 |
| C13 |
C14 |
C15 |
H6 |
180.1 |
179.7 |
| C11 |
C12 |
C13 |
H3 |
179.1 |
180.0 |
| C13 |
C12 |
C11 |
H4 |
180.0 |
179.9 |
| S10 |
C11 |
C12 |
N16 |
178.8 |
179.8 |
| C15 |
N16 |
C11 |
C12 |
358.8 |
359.5 |
| C13 |
C14 |
C15 |
H2 |
180.0 |
179.7 |
| C14 |
C15 |
N16 |
C11 |
0.4 |
0.5 |
| N16 |
C15 |
C14 |
H6 |
180.0 |
180.1 |
| C2 |
C1 |
S10 |
C11 |
55.5 |
274.2 |
| C6 |
C1 |
S10 |
C11 |
235.0 |
94.2 |
| C12 |
C11 |
S10 |
N16 |
181.2 |
180.2 |
| S10 |
C11 |
C12 |
H4 |
0.3 |
0.1 |
| C15 |
N16 |
C11 |
S10 |
179.9 |
179.7 |
| N16 |
C11 |
S10 |
C1 |
197.2 |
353.6 |
| C12 |
C11 |
N16 |
S10 |
178.9 |
179.8 |
| N16 |
C11 |
C12 |
H4 |
181.5 |
180.3 |
| C11 |
N16 |
C15 |
H6 |
180.4 |
180.6 |
| C12 |
C11 |
N16 |
C15 |
358.8 |
359.5 |
| N16 |
C15 |
C14 |
H2 |
180.1 |
180.0 |
| C14 |
C15 |
N16 |
H6 |
180.0 |
179.9 |
| S10 |
C11 |
N16 |
C15 |
179.9 |
179.7 |
| H1 |
C18 |
C17 |
C9 |
180.7 |
179.9 |
| H1 |
C18 |
C17 |
H5 |
0.7 |
359.9 |
| C13 |
C14 |
H2 |
C15 |
180.0 |
180.3 |
| H2 |
C14 |
C15 |
N16 |
180.1 |
180.0 |
| H2 |
C14 |
C15 |
H6 |
0.1 |
359.9 |
| H3 |
C13 |
C12 |
C11 |
179.1 |
180.0 |
| H3 |
C13 |
C12 |
H4 |
359.1 |
359.9 |
| H3 |
C13 |
C14 |
C15 |
180.2 |
180.0 |
| H3 |
C13 |
C14 |
H2 |
0.2 |
359.7 |
| C13 |
C12 |
H4 |
C11 |
180.0 |
180.1 |
| H4 |
C12 |
C13 |
H3 |
359.1 |
359.9 |
| H4 |
C12 |
C11 |
S10 |
0.3 |
0.1 |
| H4 |
C12 |
C11 |
N16 |
181.5 |
180.3 |
| C18 |
C17 |
H5 |
C9 |
180.0 |
180.0 |
| H5 |
C17 |
C18 |
H1 |
0.7 |
359.9 |
| H5 |
C17 |
C9 |
C21 |
178.7 |
180.0 |
| H5 |
C17 |
C9 |
O8 |
1.4 |
359.9 |
| C14 |
C15 |
H6 |
N16 |
180.0 |
180.1 |
| H6 |
C15 |
C14 |
H2 |
0.1 |
359.9 |
| H6 |
C15 |
N16 |
C11 |
180.4 |
180.6 |
| C21 |
C22 |
H7 |
C23 |
235.3 |
240.0 |
| H7 |
C22 |
C21 |
C9 |
8.3 |
210.0 |
| C21 |
C22 |
H7 |
H8 |
117.7 |
119.9 |
| C23 |
C22 |
H7 |
H8 |
242.4 |
240.0 |
| H7 |
C22 |
C23 |
H13 |
59.3 |
60.0 |
| H7 |
C22 |
C23 |
H14 |
179.3 |
180.0 |
| H7 |
C22 |
C23 |
H15 |
299.2 |
300.0 |
| C21 |
C22 |
H8 |
C23 |
124.7 |
120.0 |
| H8 |
C22 |
C21 |
C9 |
126.8 |
330.0 |
| C21 |
C22 |
H8 |
H7 |
242.3 |
240.1 |
| C23 |
C22 |
H8 |
H7 |
117.6 |
120.0 |
| H8 |
C22 |
C23 |
H13 |
300.8 |
300.0 |
| H8 |
C22 |
C23 |
H14 |
60.8 |
60.0 |
| H8 |
C22 |
C23 |
H15 |
180.8 |
180.0 |
| N5 |
C6 |
H9 |
C1 |
180.0 |
180.1 |
| H9 |
C6 |
C1 |
S10 |
0.2 |
360.0 |
| H10 |
C19 |
N20 |
C21 |
179.7 |
179.5 |
| H10 |
C19 |
C18 |
H1 |
0.1 |
0.3 |
| H11 |
C2 |
C1 |
S10 |
0.3 |
360.0 |
| H13 |
C23 |
C22 |
H7 |
59.3 |
60.0 |
| H13 |
C23 |
C22 |
H8 |
300.8 |
300.0 |
| C22 |
C23 |
H13 |
H14 |
120.0 |
120.0 |
| C22 |
C23 |
H13 |
H15 |
240.0 |
240.0 |
| H14 |
C23 |
H13 |
H15 |
120.0 |
120.0 |
| H14 |
C23 |
C22 |
H7 |
179.3 |
180.0 |
| H14 |
C23 |
C22 |
H8 |
60.8 |
60.0 |
| C22 |
C23 |
H14 |
H13 |
240.0 |
240.0 |
| C22 |
C23 |
H14 |
H15 |
120.0 |
120.0 |
| H13 |
C23 |
H14 |
H15 |
240.0 |
240.0 |
| H15 |
C23 |
C22 |
H7 |
299.2 |
300.0 |
| H15 |
C23 |
C22 |
H8 |
180.8 |
180.0 |
| C22 |
C23 |
H15 |
H13 |
120.0 |
120.0 |
| C22 |
C23 |
H15 |
H14 |
240.0 |
240.0 |
| H13 |
C23 |
H15 |
H14 |
120.0 |
120.0 |
| H17 |
C27 |
N26 |
H16 |
0.0 |
120.0 |
| H18 |
C27 |
H17 |
H19 |
120.0 |
119.9 |
| H18 |
C27 |
N26 |
H16 |
120.0 |
240.0 |
| H17 |
C27 |
H18 |
H19 |
240.0 |
240.0 |
| H19 |
C27 |
N26 |
H16 |
240.0 |
359.9 |
| H17 |
C27 |
H19 |
H18 |
120.0 |
120.0 |