PDB Chemical Component 3LN
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 3LN
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N28 |
C27 |
1.328 |
1.319 |
N28 |
C29 |
1.328 |
1.322 |
C27 |
N26 |
1.322 |
1.318 |
C29 |
C15 |
1.391 |
1.398 |
N26 |
C25 |
1.320 |
1.322 |
C15 |
C25 |
1.398 |
1.397 |
C15 |
C1 |
1.394 |
1.483 |
N21 |
C19 |
1.323 |
1.373 |
C1 |
C6 |
1.398 |
1.393 |
C1 |
C2 |
1.387 |
1.394 |
C19 |
N20 |
1.331 |
1.300 |
C19 |
O18 |
1.361 |
1.348 |
C6 |
C5 |
1.393 |
1.381 |
N20 |
C10 |
1.481 |
1.469 |
C2 |
C3 |
1.394 |
1.377 |
O18 |
C17 |
1.457 |
1.444 |
C5 |
C10 |
1.551 |
1.500 |
C5 |
C4 |
1.395 |
1.389 |
C3 |
C4 |
1.385 |
1.391 |
C10 |
C17 |
1.531 |
1.543 |
C10 |
C9 |
1.523 |
1.499 |
C4 |
O7 |
1.357 |
1.355 |
C9 |
C14 |
1.398 |
1.383 |
C9 |
C8 |
1.392 |
1.387 |
O7 |
C8 |
1.362 |
1.355 |
C14 |
C13 |
1.410 |
1.386 |
C8 |
C11 |
1.381 |
1.390 |
C13 |
O16 |
1.372 |
1.360 |
C13 |
C12 |
1.382 |
1.386 |
C11 |
C12 |
1.376 |
1.381 |
C30 |
C23 |
1.524 |
1.530 |
O16 |
C22 |
1.386 |
1.429 |
C22 |
C23 |
1.530 |
1.530 |
C23 |
C31 |
1.532 |
1.530 |
C23 |
C24 |
1.538 |
1.530 |
C14 |
H1 |
1.080 |
1.079 |
C6 |
H2 |
1.080 |
1.081 |
C11 |
H3 |
1.080 |
1.080 |
C12 |
H4 |
1.080 |
1.080 |
C3 |
H5 |
1.080 |
1.080 |
C25 |
H6 |
1.080 |
1.081 |
C27 |
H7 |
1.080 |
1.080 |
C29 |
H8 |
1.080 |
1.080 |
C2 |
H9 |
1.080 |
1.081 |
C22 |
H10 |
1.100 |
1.089 |
C22 |
H11 |
1.100 |
1.090 |
C30 |
H12 |
1.100 |
1.089 |
C30 |
H13 |
1.100 |
1.090 |
C30 |
H14 |
1.100 |
1.091 |
C31 |
H15 |
1.100 |
1.090 |
C31 |
H16 |
1.099 |
1.090 |
C31 |
H17 |
1.100 |
1.089 |
C24 |
H18 |
1.100 |
1.090 |
C24 |
H19 |
1.100 |
1.090 |
C24 |
H20 |
1.100 |
1.091 |
C17 |
H21 |
1.100 |
1.090 |
C17 |
H22 |
1.100 |
1.089 |
N21 |
H23 |
1.000 |
0.970 |
N21 |
H24 |
1.000 |
0.970 |
Bond Angles for 3LN
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
N28 |
C27 |
H7 |
119.6 |
119.0 |
N28 |
C29 |
C15 |
118.7 |
119.0 |
N28 |
C29 |
H8 |
120.7 |
120.5 |
C29 |
C15 |
C1 |
122.2 |
120.9 |
C15 |
C29 |
H8 |
120.6 |
120.5 |
N26 |
C25 |
H6 |
120.1 |
120.5 |
C15 |
C25 |
H6 |
120.0 |
120.5 |
C15 |
C1 |
C2 |
120.4 |
120.2 |
N21 |
C19 |
N20 |
124.1 |
123.1 |
C1 |
C6 |
H2 |
119.4 |
119.9 |
C1 |
C2 |
H9 |
120.2 |
120.0 |
C6 |
C5 |
C10 |
120.3 |
119.7 |
C2 |
C3 |
H5 |
119.6 |
119.9 |
O18 |
C17 |
H21 |
110.6 |
111.0 |
O18 |
C17 |
H22 |
110.6 |
111.1 |
C5 |
C10 |
C17 |
111.7 |
110.2 |
C5 |
C10 |
C9 |
111.5 |
111.6 |
C5 |
C4 |
O7 |
122.9 |
120.9 |
C3 |
C4 |
O7 |
116.8 |
119.2 |
C10 |
C17 |
H21 |
110.6 |
111.1 |
C10 |
C17 |
H22 |
110.6 |
111.1 |
C4 |
O7 |
C8 |
119.6 |
120.6 |
C9 |
C14 |
C13 |
119.7 |
120.2 |
C9 |
C14 |
H1 |
120.2 |
119.9 |
C14 |
C13 |
O16 |
126.0 |
120.0 |
C14 |
C13 |
C12 |
119.4 |
120.0 |
C13 |
C14 |
H1 |
120.2 |
119.9 |
C8 |
C11 |
C12 |
121.1 |
120.2 |
C8 |
C11 |
H3 |
119.5 |
119.9 |
C13 |
O16 |
C22 |
117.5 |
117.0 |
C13 |
C12 |
H4 |
119.8 |
120.1 |
C12 |
C11 |
H3 |
119.4 |
119.9 |
C11 |
C12 |
H4 |
119.8 |
120.0 |
C30 |
C23 |
C31 |
112.9 |
109.5 |
C30 |
C23 |
C24 |
109.3 |
109.5 |
O16 |
C22 |
C23 |
107.1 |
109.5 |
O16 |
C22 |
H10 |
110.1 |
109.5 |
O16 |
C22 |
H11 |
110.1 |
109.4 |
C22 |
C23 |
C31 |
106.5 |
109.5 |
C22 |
C23 |
C24 |
113.0 |
109.5 |
C23 |
C22 |
H10 |
110.1 |
109.5 |
C23 |
C22 |
H11 |
110.0 |
109.4 |
C31 |
C23 |
C24 |
108.5 |
109.5 |
C23 |
C31 |
H15 |
109.5 |
109.4 |
C23 |
C31 |
H16 |
109.5 |
109.5 |
C23 |
C31 |
H17 |
109.5 |
109.5 |
C23 |
C24 |
H18 |
109.5 |
109.5 |
C23 |
C24 |
H19 |
109.5 |
109.5 |
C23 |
C24 |
H20 |
109.5 |
109.5 |
H10 |
C22 |
H11 |
109.5 |
109.5 |
H12 |
C30 |
H13 |
109.5 |
109.5 |
H12 |
C30 |
H14 |
109.4 |
109.5 |
H13 |
C30 |
H14 |
109.4 |
109.4 |
H15 |
C31 |
H16 |
109.5 |
109.5 |
H15 |
C31 |
H17 |
109.5 |
109.4 |
H16 |
C31 |
H17 |
109.5 |
109.5 |
H18 |
C24 |
H19 |
109.5 |
109.5 |
H18 |
C24 |
H20 |
109.5 |
109.4 |
H19 |
C24 |
H20 |
109.4 |
109.4 |
H21 |
C17 |
H22 |
109.4 |
111.0 |
H23 |
N21 |
H24 |
120.0 |
120.0 |
Torsion Angles for 3LN
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C29 |
N28 |
C27 |
H7 |
179.9 |
180.0 |
N28 |
C29 |
C15 |
C1 |
181.8 |
180.0 |
C15 |
C29 |
N28 |
H8 |
180.0 |
179.8 |
C27 |
N26 |
C25 |
H6 |
180.1 |
180.0 |
N28 |
C29 |
C15 |
H8 |
180.0 |
180.2 |
C29 |
C15 |
C25 |
H6 |
180.7 |
179.8 |
C29 |
C15 |
C1 |
C2 |
225.6 |
359.8 |
C15 |
C25 |
N26 |
H6 |
180.0 |
180.2 |
N26 |
C25 |
C15 |
H6 |
180.0 |
179.8 |
C1 |
C15 |
C29 |
H8 |
1.8 |
359.8 |
C1 |
C15 |
C25 |
H6 |
357.7 |
0.3 |
C15 |
C1 |
C6 |
H2 |
358.2 |
0.1 |
C15 |
C1 |
C2 |
H9 |
1.3 |
360.0 |
C2 |
C1 |
C6 |
H2 |
180.5 |
180.2 |
C1 |
C2 |
C3 |
H5 |
180.7 |
180.0 |
C19 |
O18 |
C17 |
H21 |
111.9 |
266.3 |
C19 |
O18 |
C17 |
H22 |
233.3 |
142.2 |
C6 |
C5 |
C10 |
C17 |
59.2 |
74.1 |
C6 |
C5 |
C10 |
C9 |
184.3 |
197.0 |
C6 |
C5 |
C4 |
O7 |
179.9 |
180.0 |
N20 |
C10 |
C17 |
H21 |
246.9 |
94.9 |
N20 |
C10 |
C17 |
H22 |
125.5 |
219.0 |
C2 |
C3 |
C4 |
O7 |
179.6 |
180.0 |
C10 |
C17 |
O18 |
H21 |
240.7 |
118.0 |
C10 |
C17 |
O18 |
H22 |
119.3 |
242.0 |
H21 |
C17 |
O18 |
H22 |
238.6 |
124.1 |
C10 |
C5 |
C4 |
O7 |
1.3 |
0.1 |
C5 |
C10 |
C17 |
H21 |
127.2 |
336.8 |
C5 |
C10 |
C17 |
H22 |
5.8 |
100.9 |
C3 |
C4 |
C5 |
O7 |
179.4 |
179.8 |
C5 |
C4 |
O7 |
C8 |
354.6 |
340.4 |
C5 |
C4 |
C3 |
O7 |
180.6 |
180.2 |
C3 |
C4 |
O7 |
C8 |
175.2 |
160.7 |
O18 |
C17 |
C10 |
H21 |
119.3 |
242.1 |
O18 |
C17 |
C10 |
H22 |
240.7 |
118.0 |
C5 |
C10 |
C17 |
C9 |
125.3 |
123.7 |
H21 |
C17 |
C10 |
H22 |
121.4 |
236.0 |
C5 |
C10 |
C9 |
C17 |
234.7 |
237.1 |
C10 |
C9 |
C14 |
C13 |
180.0 |
180.0 |
C10 |
C9 |
C14 |
H1 |
360.0 |
0.0 |
C9 |
C14 |
C13 |
O16 |
178.5 |
180.0 |
C9 |
C14 |
C13 |
C12 |
1.1 |
0.1 |
C13 |
C14 |
C9 |
H1 |
180.0 |
179.9 |
C5 |
C10 |
C9 |
C8 |
356.9 |
343.0 |
C4 |
O7 |
C8 |
C9 |
5.2 |
19.6 |
C8 |
C9 |
C14 |
C13 |
359.0 |
360.0 |
C8 |
C9 |
C14 |
H1 |
179.0 |
180.0 |
C9 |
C8 |
C11 |
C12 |
359.8 |
0.1 |
C9 |
C8 |
C11 |
H3 |
179.9 |
180.0 |
O7 |
C8 |
C11 |
H3 |
0.1 |
0.1 |
C9 |
C14 |
C13 |
H1 |
180.0 |
180.1 |
C14 |
C13 |
O16 |
C22 |
30.1 |
180.0 |
C14 |
C13 |
C12 |
H4 |
179.3 |
180.0 |
C4 |
O7 |
C8 |
C11 |
184.9 |
199.5 |
C12 |
C11 |
C8 |
H3 |
180.0 |
180.1 |
C8 |
C11 |
C12 |
H4 |
180.2 |
180.0 |
C14 |
C13 |
O16 |
C12 |
182.4 |
180.1 |
O16 |
C13 |
C14 |
H1 |
358.5 |
359.9 |
O16 |
C13 |
C12 |
H4 |
1.6 |
0.0 |
C13 |
O16 |
C22 |
C23 |
169.2 |
180.0 |
C13 |
O16 |
C22 |
H10 |
288.8 |
300.1 |
C13 |
O16 |
C22 |
H11 |
49.6 |
60.1 |
C14 |
C13 |
C12 |
O16 |
177.7 |
179.9 |
C12 |
C13 |
C14 |
H1 |
181.1 |
180.0 |
C13 |
C12 |
C11 |
H3 |
180.3 |
180.0 |
C11 |
C12 |
C13 |
H4 |
180.0 |
180.0 |
C14 |
C13 |
C12 |
C11 |
359.3 |
360.0 |
C8 |
C11 |
C12 |
H3 |
180.0 |
179.9 |
C13 |
C12 |
C11 |
H4 |
180.0 |
180.0 |
C22 |
C23 |
C30 |
C31 |
116.7 |
120.0 |
C22 |
C23 |
C30 |
C24 |
237.5 |
240.0 |
C30 |
C23 |
C22 |
H10 |
338.4 |
180.0 |
C30 |
C23 |
C22 |
H11 |
217.7 |
60.0 |
C31 |
C23 |
C30 |
C24 |
120.8 |
120.0 |
C30 |
C23 |
C31 |
H15 |
180.0 |
180.0 |
C30 |
C23 |
C31 |
H16 |
300.0 |
300.0 |
C30 |
C23 |
C31 |
H17 |
60.0 |
60.0 |
C30 |
C23 |
C24 |
H18 |
180.0 |
300.0 |
C30 |
C23 |
C24 |
H19 |
300.0 |
60.0 |
C30 |
C23 |
C24 |
H20 |
60.0 |
180.0 |
O16 |
C22 |
C23 |
C31 |
218.9 |
60.0 |
O16 |
C22 |
C23 |
C24 |
337.9 |
180.0 |
C23 |
C22 |
O16 |
H10 |
240.4 |
240.0 |
C23 |
C22 |
O16 |
H11 |
119.6 |
119.9 |
H10 |
C22 |
O16 |
H11 |
239.3 |
240.0 |
C30 |
C23 |
C22 |
C31 |
239.1 |
240.0 |
C30 |
C23 |
C22 |
C24 |
120.2 |
120.0 |
O16 |
C22 |
C23 |
H10 |
119.6 |
120.0 |
O16 |
C22 |
C23 |
H11 |
240.4 |
240.1 |
C31 |
C23 |
C22 |
C24 |
241.1 |
240.0 |
C22 |
C23 |
C31 |
H15 |
63.1 |
59.9 |
C22 |
C23 |
C31 |
H16 |
183.1 |
180.0 |
C22 |
C23 |
C31 |
H17 |
303.1 |
300.0 |
C22 |
C23 |
C24 |
H18 |
298.7 |
60.0 |
C22 |
C23 |
C24 |
H19 |
58.8 |
180.1 |
C22 |
C23 |
C24 |
H20 |
178.7 |
300.0 |
H10 |
C22 |
C23 |
H11 |
120.7 |
120.0 |
C30 |
C23 |
C31 |
C24 |
238.7 |
240.0 |
C22 |
C23 |
C31 |
C24 |
121.8 |
120.0 |
C31 |
C23 |
C22 |
H10 |
99.3 |
300.0 |
C31 |
C23 |
C22 |
H11 |
338.6 |
180.0 |
C31 |
C23 |
C24 |
H18 |
56.5 |
180.0 |
C31 |
C23 |
C24 |
H19 |
176.5 |
300.1 |
C31 |
C23 |
C24 |
H20 |
296.5 |
60.0 |
H15 |
C31 |
C23 |
H16 |
240.0 |
240.0 |
H15 |
C31 |
C23 |
H17 |
120.0 |
119.9 |
H16 |
C31 |
C23 |
H17 |
240.0 |
239.9 |
C30 |
C23 |
C24 |
C31 |
123.5 |
120.0 |
C22 |
C23 |
C24 |
C31 |
242.2 |
240.0 |
C24 |
C23 |
C22 |
H10 |
218.3 |
60.0 |
C24 |
C23 |
C22 |
H11 |
97.5 |
300.0 |
C24 |
C23 |
C31 |
H15 |
301.3 |
300.0 |
C24 |
C23 |
C31 |
H16 |
61.3 |
60.0 |
C24 |
C23 |
C31 |
H17 |
181.3 |
180.0 |
H18 |
C24 |
C23 |
H19 |
240.0 |
239.9 |
H18 |
C24 |
C23 |
H20 |
120.0 |
120.0 |
H19 |
C24 |
C23 |
H20 |
240.0 |
240.0 |
C9 |
C14 |
H1 |
C13 |
180.0 |
179.9 |
H1 |
C14 |
C13 |
O16 |
358.5 |
359.9 |
H1 |
C14 |
C13 |
C12 |
181.1 |
180.0 |
H2 |
C6 |
C5 |
C10 |
359.0 |
359.9 |
C8 |
C11 |
H3 |
C12 |
180.0 |
180.1 |
H3 |
C11 |
C12 |
H4 |
0.2 |
0.0 |
H4 |
C12 |
C11 |
H3 |
0.2 |
0.0 |
H5 |
C3 |
C4 |
O7 |
359.6 |
359.9 |
N28 |
C29 |
H8 |
C15 |
180.0 |
179.8 |
H8 |
C29 |
C15 |
C1 |
1.8 |
359.8 |
H9 |
C2 |
C3 |
H5 |
0.7 |
0.0 |
O16 |
C22 |
H10 |
C23 |
242.2 |
240.0 |
O16 |
C22 |
H10 |
H11 |
121.1 |
120.0 |
H10 |
C22 |
C23 |
C31 |
99.3 |
300.0 |
H10 |
C22 |
C23 |
C24 |
218.3 |
60.0 |
C23 |
C22 |
H10 |
H11 |
238.9 |
240.0 |
O16 |
C22 |
H11 |
C23 |
117.8 |
120.0 |
O16 |
C22 |
H11 |
H10 |
238.9 |
240.0 |
H11 |
C22 |
C23 |
C31 |
338.6 |
180.0 |
H11 |
C22 |
C23 |
C24 |
97.5 |
300.0 |
C23 |
C22 |
H11 |
H10 |
121.1 |
120.0 |
H12 |
C30 |
C23 |
C31 |
63.3 |
300.0 |
H12 |
C30 |
C23 |
C24 |
302.5 |
180.0 |
H13 |
C30 |
H12 |
H14 |
120.0 |
120.0 |
H13 |
C30 |
C23 |
C31 |
183.3 |
60.0 |
H13 |
C30 |
C23 |
C24 |
62.5 |
300.0 |
H12 |
C30 |
H13 |
H14 |
240.0 |
240.0 |
H14 |
C30 |
C23 |
C31 |
303.3 |
180.0 |
H14 |
C30 |
C23 |
C24 |
182.5 |
60.0 |
H12 |
C30 |
H14 |
H13 |
120.0 |
120.0 |
H15 |
C31 |
C23 |
C24 |
301.3 |
300.0 |
C23 |
C31 |
H15 |
H16 |
120.0 |
120.0 |
C23 |
C31 |
H15 |
H17 |
240.0 |
240.0 |
H16 |
C31 |
H15 |
H17 |
120.0 |
120.0 |
H16 |
C31 |
C23 |
C24 |
61.3 |
60.0 |
C23 |
C31 |
H16 |
H15 |
240.0 |
240.0 |
C23 |
C31 |
H16 |
H17 |
120.0 |
120.1 |
H15 |
C31 |
H16 |
H17 |
240.0 |
240.1 |
H17 |
C31 |
C23 |
C24 |
181.3 |
180.0 |
C23 |
C31 |
H17 |
H15 |
120.0 |
119.9 |
C23 |
C31 |
H17 |
H16 |
240.0 |
239.9 |
H15 |
C31 |
H17 |
H16 |
120.0 |
120.0 |
C23 |
C24 |
H18 |
H19 |
120.0 |
120.1 |
C23 |
C24 |
H18 |
H20 |
240.0 |
240.0 |
H19 |
C24 |
H18 |
H20 |
120.0 |
119.9 |
C23 |
C24 |
H19 |
H18 |
240.0 |
239.9 |
C23 |
C24 |
H19 |
H20 |
120.0 |
120.0 |
H18 |
C24 |
H19 |
H20 |
240.0 |
240.1 |
C23 |
C24 |
H20 |
H18 |
120.0 |
120.0 |
C23 |
C24 |
H20 |
H19 |
240.0 |
240.0 |
H18 |
C24 |
H20 |
H19 |
120.0 |
120.0 |
O18 |
C17 |
H21 |
H22 |
122.1 |
235.9 |
C10 |
C17 |
H21 |
H22 |
237.9 |
124.1 |
O18 |
C17 |
H22 |
H21 |
237.9 |
124.1 |
C10 |
C17 |
H22 |
H21 |
122.0 |
235.9 |
H23 |
N21 |
C19 |
N20 |
360.0 |
0.1 |
H24 |
N21 |
C19 |
N20 |
180.0 |
180.0 |