PDB Chemical Component 3KV
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 3KV
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C20 |
C13 |
1.498 |
1.507 |
O2 |
C15 |
1.259 |
1.217 |
C13 |
C12 |
1.466 |
1.404 |
C13 |
C14 |
1.370 |
1.364 |
C12 |
C11 |
1.332 |
1.366 |
C15 |
C14 |
1.490 |
1.409 |
C15 |
O1 |
1.252 |
1.351 |
C11 |
C10 |
1.401 |
1.403 |
C18 |
C5 |
1.512 |
1.507 |
C10 |
C9 |
1.347 |
1.364 |
C9 |
C8 |
1.475 |
1.406 |
C9 |
C19 |
1.542 |
1.507 |
C4 |
C5 |
1.520 |
1.501 |
C4 |
C3 |
1.513 |
1.530 |
C5 |
C6 |
1.351 |
1.322 |
C8 |
C7 |
1.363 |
1.358 |
C7 |
C6 |
1.504 |
1.418 |
C6 |
C1 |
1.566 |
1.502 |
C3 |
C2 |
1.535 |
1.533 |
C16 |
C1 |
1.537 |
1.530 |
C1 |
C2 |
1.578 |
1.530 |
C1 |
C17 |
1.532 |
1.530 |
C4 |
H1 |
1.100 |
1.090 |
C4 |
H2 |
1.100 |
1.090 |
C7 |
H5 |
1.080 |
1.080 |
C8 |
H6 |
1.080 |
1.080 |
C10 |
H7 |
1.080 |
1.080 |
C17 |
H8 |
1.100 |
1.090 |
C17 |
H9 |
1.100 |
1.090 |
C17 |
H10 |
1.100 |
1.090 |
C20 |
H11 |
1.100 |
1.090 |
C20 |
H12 |
1.100 |
1.090 |
C20 |
H13 |
1.100 |
1.089 |
O1 |
H14 |
0.950 |
0.967 |
C14 |
H15 |
1.080 |
1.079 |
C12 |
H16 |
1.080 |
1.080 |
C11 |
H18 |
1.080 |
1.080 |
C19 |
H20 |
1.099 |
1.090 |
C19 |
H21 |
1.100 |
1.090 |
C19 |
H22 |
1.100 |
1.089 |
C18 |
H23 |
1.100 |
1.091 |
C18 |
H24 |
1.100 |
1.090 |
C18 |
H25 |
1.100 |
1.089 |
C3 |
H26 |
1.100 |
1.091 |
C3 |
H27 |
1.100 |
1.090 |
C2 |
H28 |
1.100 |
1.090 |
C2 |
H29 |
1.100 |
1.090 |
C16 |
H30 |
1.100 |
1.090 |
C16 |
H31 |
1.100 |
1.089 |
C16 |
H32 |
1.100 |
1.090 |
Bond Angles for 3KV
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C20 |
C13 |
C12 |
118.4 |
120.0 |
C20 |
C13 |
C14 |
123.1 |
120.0 |
O2 |
C15 |
C14 |
120.4 |
120.1 |
C14 |
C13 |
C12 |
118.3 |
120.0 |
C13 |
C12 |
C11 |
107.9 |
120.0 |
C13 |
C12 |
H16 |
126.1 |
120.0 |
C13 |
C14 |
C15 |
127.2 |
119.9 |
C13 |
C14 |
H15 |
116.4 |
120.0 |
C11 |
C12 |
H16 |
126.0 |
120.0 |
C12 |
C11 |
H18 |
121.9 |
120.0 |
O1 |
C15 |
C14 |
118.8 |
120.0 |
C15 |
C14 |
H15 |
116.4 |
120.1 |
C15 |
O1 |
H14 |
109.5 |
114.0 |
C11 |
C10 |
C9 |
116.1 |
120.0 |
C11 |
C10 |
H7 |
121.9 |
120.0 |
C10 |
C9 |
C19 |
125.5 |
120.0 |
C9 |
C10 |
H7 |
122.0 |
119.9 |
C9 |
C8 |
H6 |
115.6 |
120.0 |
C9 |
C19 |
H20 |
109.5 |
109.5 |
C9 |
C19 |
H21 |
109.5 |
109.5 |
C9 |
C19 |
H22 |
109.5 |
109.5 |
C5 |
C4 |
C3 |
103.7 |
110.1 |
C4 |
C5 |
C6 |
114.0 |
123.7 |
C5 |
C4 |
H1 |
110.9 |
109.4 |
C5 |
C4 |
H2 |
110.9 |
109.4 |
C4 |
C3 |
C2 |
117.1 |
108.6 |
C3 |
C4 |
H1 |
110.9 |
109.4 |
C3 |
C4 |
H2 |
110.9 |
109.3 |
C4 |
C3 |
H26 |
107.5 |
109.6 |
C4 |
C3 |
H27 |
107.6 |
109.7 |
C5 |
C6 |
C1 |
118.0 |
123.7 |
C8 |
C7 |
H5 |
121.6 |
120.0 |
C7 |
C6 |
C1 |
124.9 |
118.1 |
C6 |
C1 |
C2 |
111.0 |
110.1 |
C6 |
C1 |
C17 |
122.3 |
109.4 |
C2 |
C3 |
H26 |
107.5 |
109.6 |
C2 |
C3 |
H27 |
107.5 |
109.6 |
C3 |
C2 |
H28 |
109.6 |
109.6 |
C3 |
C2 |
H29 |
109.6 |
109.7 |
C1 |
C2 |
H28 |
109.6 |
109.6 |
C1 |
C2 |
H29 |
109.6 |
109.8 |
C1 |
C17 |
H8 |
109.5 |
109.5 |
C1 |
C17 |
H9 |
109.5 |
109.5 |
C1 |
C17 |
H10 |
109.5 |
109.5 |
H1 |
C4 |
H2 |
109.5 |
109.3 |
H8 |
C17 |
H9 |
109.5 |
109.5 |
H8 |
C17 |
H10 |
109.4 |
109.4 |
H9 |
C17 |
H10 |
109.5 |
109.5 |
H11 |
C20 |
H12 |
109.5 |
109.4 |
H11 |
C20 |
H13 |
109.4 |
109.5 |
H12 |
C20 |
H13 |
109.5 |
109.4 |
H20 |
C19 |
H21 |
109.5 |
109.4 |
H20 |
C19 |
H22 |
109.4 |
109.5 |
H21 |
C19 |
H22 |
109.5 |
109.5 |
H23 |
C18 |
H24 |
109.4 |
109.5 |
H23 |
C18 |
H25 |
109.4 |
109.4 |
H24 |
C18 |
H25 |
109.5 |
109.5 |
H26 |
C3 |
H27 |
109.5 |
109.8 |
H28 |
C2 |
H29 |
109.5 |
109.6 |
H30 |
C16 |
H31 |
109.5 |
109.5 |
H30 |
C16 |
H32 |
109.4 |
109.4 |
H31 |
C16 |
H32 |
109.5 |
109.5 |
Torsion Angles for 3KV
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C14 |
C13 |
C20 |
C12 |
185.0 |
180.0 |
C20 |
C13 |
C12 |
C11 |
154.8 |
0.0 |
C20 |
C13 |
C12 |
H16 |
334.9 |
180.0 |
C20 |
C13 |
C14 |
C15 |
356.9 |
7.9 |
C20 |
C13 |
C14 |
H15 |
177.0 |
187.9 |
C13 |
C14 |
C15 |
O2 |
342.0 |
6.6 |
O1 |
C15 |
O2 |
C14 |
179.5 |
180.1 |
O2 |
C15 |
C14 |
H15 |
161.9 |
186.6 |
O2 |
C15 |
O1 |
H14 |
360.0 |
359.9 |
C20 |
C13 |
C12 |
C14 |
184.7 |
180.0 |
C12 |
C13 |
C14 |
C15 |
181.9 |
187.9 |
C12 |
C13 |
C14 |
H15 |
1.9 |
7.9 |
C11 |
C12 |
C13 |
H16 |
180.0 |
180.0 |
C13 |
C12 |
C11 |
H18 |
354.2 |
359.9 |
C20 |
C13 |
C14 |
C12 |
175.0 |
180.0 |
O2 |
C15 |
C14 |
C13 |
342.0 |
6.6 |
C14 |
C13 |
C12 |
C11 |
330.1 |
180.0 |
C14 |
C13 |
C12 |
H16 |
150.1 |
0.0 |
O1 |
C15 |
C14 |
C13 |
162.4 |
186.5 |
C15 |
C14 |
C13 |
H15 |
180.0 |
180.0 |
C13 |
C12 |
C11 |
H16 |
180.0 |
180.0 |
C12 |
C11 |
C10 |
C9 |
262.3 |
180.0 |
C12 |
C11 |
C10 |
H7 |
82.4 |
359.9 |
C15 |
C14 |
C13 |
C12 |
181.9 |
187.9 |
C13 |
C14 |
C15 |
H15 |
180.0 |
180.0 |
C14 |
C15 |
O1 |
H14 |
179.5 |
180.0 |
O2 |
C15 |
O1 |
C14 |
180.5 |
179.9 |
C13 |
C14 |
C15 |
O1 |
162.4 |
186.5 |
O1 |
C15 |
C14 |
H15 |
342.4 |
6.6 |
C11 |
C10 |
C9 |
C19 |
359.0 |
359.9 |
C9 |
C10 |
C11 |
H7 |
180.0 |
180.1 |
C18 |
C5 |
C4 |
C3 |
235.8 |
162.8 |
C18 |
C5 |
C4 |
H1 |
354.8 |
283.0 |
C18 |
C5 |
C4 |
H2 |
116.7 |
42.6 |
C18 |
C5 |
C6 |
C1 |
171.5 |
180.4 |
C11 |
C10 |
C9 |
H7 |
180.0 |
179.9 |
C10 |
C9 |
C8 |
H6 |
256.4 |
0.0 |
C10 |
C9 |
C19 |
H20 |
180.0 |
90.1 |
C10 |
C9 |
C19 |
H21 |
300.0 |
210.0 |
C10 |
C9 |
C19 |
H22 |
60.0 |
330.0 |
C9 |
C8 |
C7 |
H5 |
4.4 |
6.2 |
C19 |
C9 |
C10 |
H7 |
178.9 |
180.0 |
C19 |
C9 |
C8 |
H6 |
77.9 |
180.1 |
H20 |
C19 |
C9 |
H21 |
240.0 |
240.0 |
H20 |
C19 |
C9 |
H22 |
120.0 |
120.0 |
H21 |
C19 |
C9 |
H22 |
240.0 |
240.0 |
C5 |
C4 |
C3 |
C2 |
303.2 |
49.9 |
C3 |
C4 |
C5 |
H1 |
240.9 |
239.8 |
C3 |
C4 |
C5 |
H2 |
119.1 |
120.2 |
C5 |
C4 |
C3 |
H26 |
64.3 |
169.5 |
C5 |
C4 |
C3 |
H27 |
182.1 |
290.1 |
C4 |
C5 |
C6 |
C1 |
341.6 |
0.3 |
H1 |
C4 |
C5 |
H2 |
238.1 |
240.4 |
C3 |
C4 |
C5 |
C6 |
64.8 |
342.9 |
C5 |
C4 |
C3 |
H1 |
119.1 |
120.2 |
C5 |
C4 |
C3 |
H2 |
240.9 |
239.8 |
C2 |
C3 |
C4 |
H26 |
238.9 |
240.3 |
C2 |
C3 |
C4 |
H27 |
121.1 |
119.7 |
C4 |
C3 |
C2 |
H28 |
124.8 |
51.4 |
C4 |
C3 |
C2 |
H29 |
245.0 |
171.8 |
H1 |
C4 |
C3 |
H2 |
121.9 |
119.6 |
H26 |
C3 |
C4 |
H27 |
242.2 |
239.4 |
C6 |
C5 |
C4 |
C3 |
64.8 |
342.9 |
C6 |
C5 |
C4 |
H1 |
183.8 |
103.0 |
C6 |
C5 |
C4 |
H2 |
305.7 |
222.7 |
C7 |
C6 |
C5 |
C1 |
171.8 |
180.1 |
C5 |
C6 |
C1 |
C2 |
322.7 |
342.9 |
C5 |
C6 |
C1 |
C17 |
193.1 |
222.7 |
C8 |
C7 |
C6 |
C1 |
202.5 |
238.7 |
C5 |
C6 |
C7 |
C1 |
188.9 |
179.9 |
C7 |
C6 |
C1 |
C2 |
151.7 |
162.8 |
C7 |
C6 |
C1 |
C17 |
22.1 |
42.6 |
C6 |
C1 |
C2 |
H28 |
281.9 |
290.1 |
C6 |
C1 |
C2 |
H29 |
161.7 |
169.7 |
C6 |
C1 |
C17 |
H8 |
180.0 |
64.5 |
C6 |
C1 |
C17 |
H9 |
300.0 |
184.5 |
C6 |
C1 |
C17 |
H10 |
60.0 |
304.5 |
C2 |
C3 |
C4 |
H1 |
184.2 |
289.7 |
C2 |
C3 |
C4 |
H2 |
62.3 |
170.0 |
C4 |
C3 |
C2 |
H26 |
121.1 |
119.7 |
C4 |
C3 |
C2 |
H27 |
238.9 |
240.2 |
C6 |
C1 |
C2 |
C3 |
41.8 |
49.8 |
C1 |
C2 |
C3 |
H28 |
240.1 |
240.3 |
C1 |
C2 |
C3 |
H29 |
119.9 |
119.9 |
H26 |
C3 |
C2 |
H27 |
117.8 |
120.5 |
H28 |
C2 |
C3 |
H29 |
239.8 |
239.6 |
C16 |
C1 |
C2 |
H28 |
163.4 |
169.9 |
C16 |
C1 |
C2 |
H29 |
43.2 |
49.5 |
C16 |
C1 |
C17 |
H8 |
290.9 |
184.2 |
C16 |
C1 |
C17 |
H9 |
50.9 |
304.2 |
C16 |
C1 |
C17 |
H10 |
170.9 |
64.2 |
C6 |
C1 |
C2 |
C17 |
223.2 |
239.8 |
C1 |
C2 |
C3 |
H26 |
243.8 |
172.1 |
C1 |
C2 |
C3 |
H27 |
126.0 |
51.5 |
C3 |
C2 |
C1 |
H28 |
119.9 |
119.7 |
C3 |
C2 |
C1 |
H29 |
240.1 |
240.2 |
C2 |
C1 |
C17 |
H8 |
49.2 |
303.8 |
C2 |
C1 |
C17 |
H9 |
169.2 |
63.8 |
C2 |
C1 |
C17 |
H10 |
289.2 |
183.9 |
H28 |
C2 |
C1 |
H29 |
120.2 |
120.4 |
C6 |
C1 |
C17 |
C2 |
130.8 |
120.6 |
H8 |
C17 |
C1 |
H9 |
240.0 |
240.0 |
H8 |
C17 |
C1 |
H10 |
120.0 |
120.0 |
H9 |
C17 |
C1 |
H10 |
240.0 |
240.0 |
C5 |
C4 |
H1 |
C3 |
245.4 |
239.4 |
H1 |
C4 |
C5 |
C6 |
183.8 |
103.0 |
C5 |
C4 |
H1 |
H2 |
122.7 |
119.7 |
H1 |
C4 |
C3 |
C2 |
184.2 |
289.7 |
C3 |
C4 |
H1 |
H2 |
237.3 |
240.3 |
H1 |
C4 |
C3 |
H26 |
305.3 |
49.3 |
H1 |
C4 |
C3 |
H27 |
63.1 |
169.9 |
C5 |
C4 |
H2 |
C3 |
114.6 |
120.6 |
H2 |
C4 |
C5 |
C6 |
305.7 |
222.7 |
C5 |
C4 |
H2 |
H1 |
237.3 |
240.3 |
H2 |
C4 |
C3 |
C2 |
62.3 |
170.0 |
C3 |
C4 |
H2 |
H1 |
122.7 |
119.7 |
H2 |
C4 |
C3 |
H26 |
183.4 |
289.7 |
H2 |
C4 |
C3 |
H27 |
301.2 |
50.3 |
H5 |
C7 |
C6 |
C1 |
22.5 |
58.7 |
H6 |
C8 |
C7 |
H5 |
184.4 |
186.2 |
C11 |
C10 |
H7 |
C9 |
180.0 |
180.1 |
H7 |
C10 |
C9 |
C19 |
178.9 |
180.0 |
C1 |
C17 |
H8 |
H9 |
120.0 |
120.0 |
C1 |
C17 |
H8 |
H10 |
240.0 |
240.0 |
H9 |
C17 |
H8 |
H10 |
120.0 |
120.0 |
C1 |
C17 |
H9 |
H8 |
240.0 |
240.0 |
C1 |
C17 |
H9 |
H10 |
120.0 |
120.0 |
H8 |
C17 |
H9 |
H10 |
240.0 |
240.1 |
C1 |
C17 |
H10 |
H8 |
120.0 |
120.0 |
C1 |
C17 |
H10 |
H9 |
240.0 |
240.0 |
H8 |
C17 |
H10 |
H9 |
120.0 |
120.0 |
H11 |
C20 |
C13 |
C12 |
180.0 |
95.5 |
H11 |
C20 |
C13 |
C14 |
5.0 |
275.5 |
H12 |
C20 |
H11 |
H13 |
120.0 |
120.0 |
H12 |
C20 |
C13 |
C12 |
300.0 |
215.5 |
H12 |
C20 |
C13 |
C14 |
125.0 |
35.5 |
H11 |
C20 |
H12 |
H13 |
240.0 |
240.0 |
H13 |
C20 |
C13 |
C12 |
60.0 |
335.5 |
H13 |
C20 |
C13 |
C14 |
245.0 |
155.4 |
H11 |
C20 |
H13 |
H12 |
120.0 |
120.0 |
H14 |
O1 |
C15 |
C14 |
179.5 |
180.0 |
H15 |
C14 |
C13 |
C12 |
1.9 |
7.9 |
C13 |
C14 |
H15 |
C15 |
180.0 |
180.0 |
C13 |
C12 |
H16 |
C11 |
180.0 |
180.0 |
H16 |
C12 |
C11 |
H18 |
174.2 |
180.0 |
H18 |
C11 |
C12 |
H16 |
174.2 |
180.0 |
H18 |
C11 |
C10 |
C9 |
82.3 |
0.1 |
H18 |
C11 |
C10 |
H7 |
262.3 |
180.0 |
C9 |
C19 |
H20 |
H21 |
120.0 |
120.0 |
C9 |
C19 |
H20 |
H22 |
240.0 |
239.9 |
H21 |
C19 |
H20 |
H22 |
120.0 |
120.0 |
C9 |
C19 |
H21 |
H20 |
240.0 |
240.0 |
C9 |
C19 |
H21 |
H22 |
120.0 |
120.1 |
H20 |
C19 |
H21 |
H22 |
240.0 |
240.0 |
C9 |
C19 |
H22 |
H20 |
120.0 |
120.0 |
C9 |
C19 |
H22 |
H21 |
240.0 |
240.0 |
H20 |
C19 |
H22 |
H21 |
120.0 |
119.9 |
H24 |
C18 |
H23 |
H25 |
120.0 |
120.0 |
H23 |
C18 |
H24 |
H25 |
240.1 |
240.0 |
H23 |
C18 |
H25 |
H24 |
119.9 |
120.0 |
C4 |
C3 |
H26 |
C2 |
233.1 |
241.0 |
H26 |
C3 |
C4 |
H1 |
305.3 |
49.3 |
H26 |
C3 |
C4 |
H2 |
183.4 |
289.7 |
C4 |
C3 |
H26 |
H27 |
116.6 |
120.5 |
C2 |
C3 |
H26 |
H27 |
243.5 |
239.6 |
H26 |
C3 |
C2 |
H28 |
3.7 |
291.7 |
H26 |
C3 |
C2 |
H29 |
123.9 |
52.1 |
C4 |
C3 |
H27 |
C2 |
126.9 |
119.1 |
H27 |
C3 |
C4 |
H1 |
63.1 |
169.9 |
H27 |
C3 |
C4 |
H2 |
301.2 |
50.3 |
C4 |
C3 |
H27 |
H26 |
243.4 |
239.5 |
C2 |
C3 |
H27 |
H26 |
116.5 |
120.4 |
H27 |
C3 |
C2 |
H28 |
245.9 |
171.2 |
H27 |
C3 |
C2 |
H29 |
6.1 |
291.6 |
H28 |
C2 |
C3 |
H26 |
3.7 |
291.7 |
H28 |
C2 |
C3 |
H27 |
245.9 |
171.2 |
C3 |
C2 |
H28 |
H29 |
120.3 |
120.4 |
C1 |
C2 |
H28 |
H29 |
239.7 |
239.4 |
H29 |
C2 |
C3 |
H26 |
123.9 |
52.1 |
H29 |
C2 |
C3 |
H27 |
6.1 |
291.6 |
C3 |
C2 |
H29 |
H28 |
239.7 |
239.6 |
C1 |
C2 |
H29 |
H28 |
120.3 |
120.4 |
H31 |
C16 |
H30 |
H32 |
120.0 |
120.1 |
H30 |
C16 |
H31 |
H32 |
240.1 |
240.0 |
H30 |
C16 |
H32 |
H31 |
120.0 |
120.0 |