PDB Chemical Component 3K8
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 3K8
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C |
O |
1.435 |
1.429 |
O |
C1 |
1.371 |
1.359 |
C6 |
C1 |
1.381 |
1.394 |
C6 |
C5 |
1.355 |
1.363 |
C1 |
C2 |
1.374 |
1.381 |
C5 |
C4 |
1.412 |
1.403 |
C2 |
C3 |
1.418 |
1.395 |
C4 |
C3 |
1.419 |
1.410 |
C4 |
C7 |
1.429 |
1.422 |
C3 |
C21 |
1.470 |
1.466 |
C15 |
C7 |
1.527 |
1.503 |
C15 |
N |
1.464 |
1.472 |
C7 |
C8 |
1.418 |
1.346 |
C14 |
N |
1.465 |
1.473 |
C14 |
C13 |
1.503 |
1.526 |
C21 |
C20 |
1.401 |
1.396 |
C21 |
C16 |
1.438 |
1.411 |
N |
C10 |
1.479 |
1.469 |
C8 |
C16 |
1.419 |
1.422 |
C8 |
C9 |
1.508 |
1.505 |
C10 |
C11 |
1.522 |
1.533 |
C10 |
C9 |
1.527 |
1.533 |
C20 |
C19 |
1.364 |
1.380 |
C12 |
C13 |
1.507 |
1.534 |
C12 |
C11 |
1.520 |
1.527 |
C16 |
C17 |
1.440 |
1.402 |
C19 |
C18 |
1.415 |
1.400 |
C19 |
O1 |
1.363 |
1.360 |
C17 |
C18 |
1.357 |
1.377 |
C22 |
O1 |
1.423 |
1.429 |
C18 |
O2 |
1.373 |
1.359 |
O2 |
C23 |
1.434 |
1.429 |
C2 |
H1 |
1.080 |
1.080 |
C23 |
H2 |
1.100 |
1.090 |
C23 |
H3 |
1.100 |
1.091 |
C23 |
H4 |
1.100 |
1.090 |
C17 |
H5 |
1.080 |
1.080 |
C22 |
H6 |
1.099 |
1.090 |
C22 |
H7 |
1.100 |
1.090 |
C22 |
H8 |
1.100 |
1.090 |
C20 |
H9 |
1.080 |
1.080 |
C9 |
H10 |
1.100 |
1.089 |
C9 |
H11 |
1.100 |
1.091 |
C10 |
H12 |
1.100 |
1.090 |
C14 |
H14 |
1.100 |
1.091 |
C14 |
H15 |
1.100 |
1.090 |
C13 |
H16 |
1.100 |
1.091 |
C13 |
H17 |
1.100 |
1.090 |
C12 |
H18 |
1.100 |
1.090 |
C12 |
H19 |
1.100 |
1.090 |
C11 |
H20 |
1.100 |
1.090 |
C11 |
H21 |
1.100 |
1.089 |
C15 |
H22 |
1.100 |
1.090 |
C15 |
H23 |
1.100 |
1.090 |
C5 |
H24 |
1.080 |
1.080 |
C6 |
H25 |
1.080 |
1.081 |
C |
H26 |
1.100 |
1.090 |
C |
H27 |
1.100 |
1.090 |
C |
H28 |
1.100 |
1.091 |
Bond Angles for 3K8
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
C5 |
H24 |
119.4 |
120.1 |
C1 |
C2 |
C3 |
120.8 |
119.4 |
C1 |
C2 |
H1 |
119.6 |
120.3 |
C2 |
C3 |
C21 |
121.9 |
121.5 |
C3 |
C2 |
H1 |
119.6 |
120.3 |
C3 |
C21 |
C20 |
122.4 |
121.5 |
C3 |
C21 |
C16 |
118.0 |
118.4 |
C7 |
C15 |
H22 |
108.6 |
108.9 |
C7 |
C15 |
H23 |
108.6 |
109.0 |
C13 |
C14 |
H14 |
108.7 |
109.2 |
C13 |
C14 |
H15 |
108.7 |
109.2 |
C14 |
C13 |
H16 |
109.2 |
109.7 |
C14 |
C13 |
H17 |
109.2 |
109.7 |
C21 |
C20 |
H9 |
119.1 |
120.2 |
N |
C10 |
C11 |
118.5 |
110.8 |
N |
C10 |
H12 |
106.4 |
110.5 |
C8 |
C9 |
H10 |
108.6 |
109.1 |
C8 |
C9 |
H11 |
108.6 |
109.0 |
C10 |
C11 |
C12 |
110.3 |
110.6 |
C11 |
C10 |
H12 |
106.0 |
110.0 |
C10 |
C11 |
H20 |
109.3 |
109.2 |
C10 |
C11 |
H21 |
109.3 |
109.2 |
C10 |
C9 |
H10 |
108.7 |
109.1 |
C10 |
C9 |
H11 |
108.7 |
109.0 |
C12 |
C13 |
H16 |
109.2 |
109.7 |
C12 |
C13 |
H17 |
109.2 |
109.7 |
C11 |
C12 |
H18 |
109.2 |
109.7 |
C11 |
C12 |
H19 |
109.2 |
109.8 |
C12 |
C11 |
H20 |
109.3 |
109.2 |
C12 |
C11 |
H21 |
109.3 |
109.3 |
C16 |
C17 |
H5 |
119.3 |
120.1 |
O2 |
C23 |
H2 |
109.5 |
109.4 |
O2 |
C23 |
H3 |
109.5 |
109.5 |
O2 |
C23 |
H4 |
109.5 |
109.5 |
H2 |
C23 |
H3 |
109.5 |
109.5 |
H2 |
C23 |
H4 |
109.5 |
109.5 |
H3 |
C23 |
H4 |
109.5 |
109.5 |
H6 |
C22 |
H7 |
109.5 |
109.5 |
H6 |
C22 |
H8 |
109.5 |
109.4 |
H7 |
C22 |
H8 |
109.5 |
109.4 |
H10 |
C9 |
H11 |
109.5 |
109.0 |
H14 |
C14 |
H15 |
109.4 |
109.2 |
H16 |
C13 |
H17 |
109.5 |
109.7 |
H18 |
C12 |
H19 |
109.5 |
109.8 |
H20 |
C11 |
H21 |
109.4 |
109.3 |
H22 |
C15 |
H23 |
109.5 |
108.9 |
H26 |
C |
H27 |
109.5 |
109.5 |
H26 |
C |
H28 |
109.5 |
109.4 |
H27 |
C |
H28 |
109.5 |
109.4 |
Torsion Angles for 3K8
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O |
C1 |
C2 |
H1 |
359.0 |
359.7 |
C6 |
C1 |
C2 |
H1 |
178.6 |
180.0 |
C1 |
C2 |
C3 |
C21 |
181.1 |
180.0 |
C3 |
C2 |
C1 |
H1 |
180.0 |
180.0 |
C1 |
C2 |
C3 |
H1 |
180.0 |
180.0 |
C2 |
C3 |
C21 |
C20 |
13.8 |
359.9 |
C2 |
C3 |
C21 |
C16 |
186.0 |
179.9 |
C4 |
C3 |
C2 |
H1 |
182.1 |
180.0 |
C4 |
C7 |
C15 |
H22 |
314.3 |
77.4 |
C4 |
C7 |
C15 |
H23 |
73.3 |
318.8 |
C21 |
C3 |
C2 |
H1 |
1.1 |
360.0 |
C3 |
C21 |
C20 |
H9 |
350.0 |
0.0 |
H22 |
C15 |
C7 |
H23 |
241.0 |
118.6 |
C15 |
N |
C10 |
H12 |
317.0 |
306.6 |
C7 |
C8 |
C9 |
H10 |
137.3 |
137.6 |
C7 |
C8 |
C9 |
H11 |
256.4 |
256.5 |
C14 |
N |
C10 |
C11 |
315.8 |
304.5 |
C14 |
N |
C10 |
H12 |
74.9 |
66.7 |
C12 |
C13 |
C14 |
H16 |
239.8 |
240.3 |
C12 |
C13 |
C14 |
H17 |
120.2 |
119.7 |
H14 |
C14 |
C13 |
H15 |
119.0 |
119.3 |
H16 |
C13 |
C14 |
H17 |
240.4 |
239.4 |
C3 |
C21 |
C20 |
C16 |
172.0 |
180.0 |
C3 |
C21 |
C16 |
C20 |
187.6 |
180.0 |
C16 |
C21 |
C20 |
H9 |
178.0 |
180.0 |
C21 |
C16 |
C17 |
H5 |
183.9 |
180.0 |
N |
C10 |
C11 |
C12 |
44.4 |
56.1 |
C11 |
C10 |
N |
H12 |
240.9 |
237.8 |
N |
C10 |
C11 |
H20 |
164.5 |
176.3 |
N |
C10 |
C11 |
H21 |
284.3 |
295.7 |
N |
C10 |
C9 |
H10 |
185.6 |
190.7 |
N |
C10 |
C9 |
H11 |
66.5 |
71.7 |
C8 |
C16 |
C17 |
H5 |
13.5 |
0.1 |
C10 |
C9 |
C8 |
H10 |
239.5 |
239.4 |
C10 |
C9 |
C8 |
H11 |
120.5 |
120.5 |
H10 |
C9 |
C8 |
H11 |
240.9 |
241.1 |
N |
C10 |
C11 |
H12 |
119.3 |
122.5 |
C11 |
C10 |
C9 |
H10 |
53.9 |
71.0 |
C11 |
C10 |
C9 |
H11 |
294.8 |
312.1 |
C10 |
C11 |
C12 |
H18 |
189.6 |
181.7 |
C10 |
C11 |
C12 |
H19 |
69.9 |
61.0 |
C12 |
C11 |
C10 |
H20 |
239.9 |
239.8 |
C12 |
C11 |
C10 |
H21 |
120.1 |
120.3 |
H20 |
C11 |
C10 |
H21 |
240.3 |
240.6 |
C8 |
C9 |
C10 |
H10 |
120.5 |
120.6 |
C8 |
C9 |
C10 |
H11 |
239.5 |
239.5 |
H10 |
C9 |
C10 |
H11 |
119.1 |
118.9 |
C3 |
C21 |
C20 |
C19 |
170.0 |
180.0 |
C12 |
C13 |
C14 |
H14 |
179.9 |
179.2 |
C12 |
C13 |
C14 |
H15 |
60.9 |
59.8 |
C14 |
C13 |
C12 |
H16 |
120.2 |
119.7 |
C14 |
C13 |
C12 |
H17 |
239.8 |
240.3 |
C10 |
C11 |
C12 |
C13 |
309.8 |
301.4 |
H16 |
C13 |
C12 |
H17 |
119.6 |
120.6 |
C12 |
C11 |
C10 |
H12 |
285.1 |
293.6 |
C10 |
C11 |
C12 |
H20 |
120.1 |
120.2 |
C10 |
C11 |
C12 |
H21 |
239.8 |
239.7 |
C11 |
C12 |
C13 |
H16 |
299.0 |
300.5 |
C11 |
C12 |
C13 |
H17 |
179.3 |
179.9 |
H18 |
C12 |
C11 |
H19 |
119.7 |
120.7 |
H20 |
C11 |
C12 |
H21 |
119.7 |
119.5 |
C3 |
C21 |
C16 |
C17 |
184.0 |
180.0 |
C18 |
O2 |
C23 |
H2 |
180.0 |
180.0 |
C18 |
O2 |
C23 |
H3 |
300.0 |
300.0 |
C18 |
O2 |
C23 |
H4 |
60.0 |
60.0 |
H2 |
C23 |
O2 |
H3 |
240.0 |
240.0 |
H2 |
C23 |
O2 |
H4 |
120.0 |
120.0 |
H3 |
C23 |
O2 |
H4 |
240.0 |
240.0 |
C1 |
C2 |
H1 |
C3 |
180.0 |
180.0 |
H1 |
C2 |
C3 |
C21 |
1.1 |
360.0 |
O2 |
C23 |
H2 |
H3 |
120.0 |
120.0 |
O2 |
C23 |
H2 |
H4 |
240.0 |
240.0 |
H3 |
C23 |
H2 |
H4 |
120.0 |
120.0 |
O2 |
C23 |
H3 |
H2 |
240.0 |
240.0 |
O2 |
C23 |
H3 |
H4 |
120.0 |
120.1 |
H2 |
C23 |
H3 |
H4 |
240.0 |
240.0 |
O2 |
C23 |
H4 |
H2 |
120.0 |
120.0 |
O2 |
C23 |
H4 |
H3 |
240.0 |
240.0 |
H2 |
C23 |
H4 |
H3 |
120.0 |
120.0 |
H7 |
C22 |
H6 |
H8 |
120.0 |
119.9 |
H6 |
C22 |
H7 |
H8 |
240.0 |
240.1 |
H6 |
C22 |
H8 |
H7 |
120.0 |
119.9 |
C8 |
C9 |
H10 |
H11 |
118.5 |
119.0 |
C10 |
C9 |
H10 |
H11 |
241.4 |
241.1 |
C8 |
C9 |
H11 |
H10 |
241.5 |
241.0 |
C10 |
C9 |
H11 |
H10 |
118.6 |
119.0 |
N |
C10 |
H12 |
C11 |
233.0 |
237.4 |
H12 |
C10 |
C11 |
C12 |
285.1 |
293.6 |
H12 |
C10 |
C11 |
H20 |
45.2 |
53.8 |
H12 |
C10 |
C11 |
H21 |
164.9 |
173.3 |
H12 |
C10 |
C9 |
H10 |
299.4 |
311.7 |
H12 |
C10 |
C9 |
H11 |
180.3 |
192.7 |
C13 |
C14 |
H14 |
H15 |
241.5 |
240.7 |
H14 |
C14 |
C13 |
H16 |
300.0 |
298.9 |
H14 |
C14 |
C13 |
H17 |
59.6 |
59.4 |
C13 |
C14 |
H15 |
H14 |
118.5 |
119.4 |
H15 |
C14 |
C13 |
H16 |
181.0 |
179.5 |
H15 |
C14 |
C13 |
H17 |
300.6 |
300.1 |
H16 |
C13 |
C14 |
H14 |
300.0 |
298.9 |
H16 |
C13 |
C14 |
H15 |
181.0 |
179.5 |
C14 |
C13 |
H16 |
H17 |
119.4 |
120.6 |
C12 |
C13 |
H16 |
H17 |
240.5 |
239.4 |
H17 |
C13 |
C14 |
H14 |
59.6 |
59.4 |
H17 |
C13 |
C14 |
H15 |
300.6 |
300.1 |
C14 |
C13 |
H17 |
H16 |
240.6 |
239.4 |
C12 |
C13 |
H17 |
H16 |
119.5 |
120.6 |
H18 |
C12 |
C13 |
H16 |
59.1 |
60.1 |
H18 |
C12 |
C13 |
H17 |
299.5 |
299.5 |
C11 |
C12 |
H18 |
H19 |
240.5 |
239.3 |
H18 |
C12 |
C11 |
H20 |
69.5 |
61.5 |
H18 |
C12 |
C11 |
H21 |
309.7 |
302.0 |
H19 |
C12 |
C13 |
H16 |
178.8 |
180.8 |
H19 |
C12 |
C13 |
H17 |
59.2 |
60.2 |
C11 |
C12 |
H19 |
H18 |
119.5 |
120.7 |
H19 |
C12 |
C11 |
H20 |
309.8 |
300.8 |
H19 |
C12 |
C11 |
H21 |
190.1 |
181.3 |
C10 |
C11 |
H20 |
C12 |
239.3 |
238.9 |
H20 |
C11 |
C10 |
H12 |
45.2 |
53.8 |
C10 |
C11 |
H20 |
H21 |
119.6 |
119.4 |
H20 |
C11 |
C12 |
H18 |
69.5 |
61.5 |
H20 |
C11 |
C12 |
H19 |
309.8 |
300.8 |
C12 |
C11 |
H20 |
H21 |
240.4 |
240.5 |
C10 |
C11 |
H21 |
C12 |
120.7 |
121.1 |
H21 |
C11 |
C10 |
H12 |
164.9 |
173.3 |
C10 |
C11 |
H21 |
H20 |
240.4 |
240.6 |
H21 |
C11 |
C12 |
H18 |
309.7 |
302.0 |
H21 |
C11 |
C12 |
H19 |
190.1 |
181.3 |
C12 |
C11 |
H21 |
H20 |
119.6 |
119.5 |
C7 |
C15 |
H22 |
H23 |
118.5 |
241.3 |
C7 |
C15 |
H23 |
H22 |
241.5 |
118.7 |
H25 |
C6 |
C5 |
H24 |
359.1 |
360.0 |
H27 |
C |
H26 |
H28 |
120.0 |
119.9 |
H26 |
C |
H27 |
H28 |
240.0 |
240.1 |
H26 |
C |
H28 |
H27 |
120.0 |
120.0 |