PDB Chemical Component 3JB

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 3JB

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C04	N1	1.326	1.316
C04	N	1.331	1.320
N1	C1	1.323	1.333
N	C02	1.332	1.331
C1	N3	1.361	1.368
C1	C3	1.390	1.406
O1	N4	1.409	1.213
O1	C14	1.335	1.337
N4	C16	1.297	1.299
N3	C6	1.350	1.368
C02	C3	1.417	1.401
C02	N2	1.356	1.384
C2	C03	1.545	1.531
C2	N2	1.462	1.470
C3	C5	1.451	1.468
C14	C	1.481	1.506
C14	N5	1.290	1.311
C16	C03	1.513	1.507
C16	N5	1.367	1.344
C6	C5	1.377	1.356
C03	O	1.421	1.430
N2	C4	1.459	1.470
C5	C01	1.489	1.483
C7	C8	1.378	1.382
C7	C01	1.389	1.395
C8	C9	1.376	1.381
C01	C06	1.388	1.391
O	C05	1.432	1.431
C4	C05	1.496	1.532
C9	C10	1.377	1.397
C06	C10	1.389	1.394
C10	C11	1.435	1.432
C11	N02	1.133	1.136
N3	H1	1.000	0.970
C4	H2	1.101	1.090
C4	H3	1.100	1.090
C7	H4	1.080	1.080
C6	H5	1.080	1.080
C9	H6	1.080	1.080
C8	H7	1.080	1.080
C04	H8	1.080	1.080
C2	H9	1.100	1.090
C2	H10	1.101	1.090
C03	H11	1.101	1.090
C05	H12	1.100	1.090
C05	H13	1.100	1.089
C06	H14	1.080	1.080
C	H15	1.100	1.090
C	H16	1.100	1.090
C	H17	1.100	1.091

Bond Angles for 3JB

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C04	N1	C1	115.8	120.7
N1	C04	H8	115.5	118.6
N1	C1	C3	122.8	118.5
N	C02	C3	123.6	118.4
C1	N3	H1	125.8	124.9
C02	C3	C1	115.0	118.8
C1	C3	C5	104.9	106.1
O1	C14	C	117.5	126.6
N3	C6	C5	110.2	109.6
C6	N3	H1	125.8	124.8
N3	C6	H5	124.9	125.2
C02	C3	C5	140.1	135.1
C16	C03	C2	112.4	109.5
C2	C03	O	108.9	109.2
C03	C2	H9	109.4	109.5
C03	C2	H10	109.4	109.5
C2	C03	H11	109.4	109.5
C6	C5	C3	106.4	106.5
C3	C5	C01	126.6	126.7
C14	C	H15	109.5	109.5
C14	C	H16	109.4	109.5
C14	C	H17	109.4	109.5
C16	C03	O	105.0	109.5
C16	C03	H11	109.8	109.5
C6	C5	C01	126.9	126.7
C5	C6	H5	124.9	125.2
C03	O	C05	111.1	113.8
O	C03	H11	111.2	109.5
N2	C4	C05	109.7	109.3
N2	C4	H2	109.4	109.5
N2	C4	H3	109.4	109.6
C7	C01	C5	120.6	120.0
C5	C01	C06	120.2	120.1
C8	C7	C01	120.5	120.2
C7	C8	C9	120.2	120.3
C8	C7	H4	119.7	119.9
C7	C8	H7	119.9	119.9
C7	C01	C06	119.2	119.9
C01	C7	H4	119.8	119.9
C8	C9	C10	120.1	120.1
C8	C9	H6	120.0	120.0
C01	C06	C10	119.9	119.7
C01	C06	H14	120.1	120.1
C4	C05	O	110.6	109.2
O	C05	H12	109.2	109.5
O	C05	H13	109.2	109.5
C05	C4	H2	109.4	109.5
C05	C4	H3	109.4	109.5
C4	C05	H12	109.2	109.5
C4	C05	H13	109.2	109.5
C9	C10	C11	120.1	120.1
C10	C9	H6	120.0	119.9
C06	C10	C11	119.6	120.1
C10	C11	N02	178.3	179.9
H2	C4	H3	109.5	109.5
H9	C2	H10	109.5	109.5
H12	C05	H13	109.4	109.6
H15	C	H16	109.5	109.5
H15	C	H17	109.5	109.4
H16	C	H17	109.5	109.4

Torsion Angles for 3JB

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C04	N1	C1	C3	0.5	359.9
C04	N	C02	C3	0.2	0.0
C1	N1	C04	H8	180.4	180.0
N1	C1	N3	H1	1.8	0.1
C02	C3	C1	N1	359.1	0.1
N1	C1	C3	C5	177.7	179.8
N	C02	C3	C1	0.6	360.0
N	C02	C3	C5	182.6	180.3
C1	N3	C6	C5	0.1	0.3
C6	N3	C1	H1	180.0	179.8
C1	N3	C6	H5	180.1	180.2
C3	C1	N3	H1	180.8	180.2
C02	C3	C1	C5	181.4	180.3
C6	C5	C3	C1	1.3	0.4
C1	C3	C5	C01	185.5	180.0
O1	C14	C	H15	0.0	359.9
O1	C14	C	H16	120.0	120.0
O1	C14	C	H17	240.0	240.0
N4	C16	C03	H11	247.7	165.0
C1	N3	C6	H1	180.0	180.2
N3	C6	C5	C3	359.1	359.6
N3	C6	C5	C01	174.9	180.0
C5	C6	N3	H5	180.0	180.1
N1	C1	C3	C02	359.1	0.1
C1	C3	C02	C5	177.9	179.6
C6	C5	C3	C02	179.4	180.1
C02	C3	C5	C01	3.6	359.7
C02	N2	C4	C05	189.1	182.4
C02	N2	C4	H2	309.2	302.3
C02	N2	C4	H3	69.1	62.5
C16	C03	C2	O	116.0	119.9
C16	C03	C2	H11	237.7	239.9
C2	C03	O	C05	299.0	301.3
O	C03	C2	H11	121.7	119.9
H9	C2	C03	H10	240.1	120.1
C2	N2	C4	C05	54.1	58.6
C2	N2	C4	H2	174.1	178.5
C2	N2	C4	H3	294.0	298.7
C02	C3	C5	C1	178.1	179.7
C6	C5	C3	C01	175.8	180.4
C3	C5	C6	H5	179.1	179.7
C7	C01	C5	C3	37.6	304.8
C3	C5	C01	C06	217.9	124.9
H15	C	C14	H16	240.0	240.0
H15	C	C14	H17	120.0	120.0
H16	C	C14	H17	240.0	240.0
C2	C03	C16	O	241.7	240.2
C16	C03	C2	H9	292.2	56.8
C16	C03	C2	H10	52.1	296.7
C2	C03	C16	H11	122.1	120.1
C16	C03	O	C05	178.3	181.4
O	C03	C16	H11	240.3	239.9
C1	C3	C5	C6	1.3	0.4
C5	C6	N3	H1	180.1	180.1
N3	C6	C5	H5	180.0	179.9
C02	C3	C5	C6	179.4	180.1
C3	C5	C6	C01	184.2	179.6
C7	C01	C5	C6	222.6	124.3
C6	C5	C01	C06	42.9	304.3
C16	C03	O	C2	239.4	240.0
O	C03	C2	H9	176.2	296.9
O	C03	C2	H10	296.1	176.8
C2	C03	O	H11	239.4	240.1
C16	C03	O	H11	118.8	120.1
C4	C05	O	C03	62.3	58.7
C03	O	C05	H12	182.5	298.8
C03	O	C05	H13	302.1	178.6
N2	C4	C05	O	303.2	303.2
C05	C4	N2	H2	240.0	240.1
C05	C4	N2	H3	120.0	119.9
N2	C4	C05	H12	183.0	63.1
N2	C4	C05	H13	63.4	183.2
H2	C4	N2	H3	240.1	239.8
C6	C5	C01	C3	185.0	179.5
C01	C5	C6	H5	354.9	0.1
C8	C7	C01	C5	180.2	180.0
C7	C01	C5	C06	179.7	179.9
C5	C01	C7	H4	0.2	0.3
C5	C01	C06	C10	179.3	180.0
C5	C01	C06	H14	359.3	359.9
C8	C7	C01	C06	359.8	360.0
C01	C7	C8	H4	180.0	180.3
C7	C8	C9	C10	0.4	0.0
C7	C8	C9	H6	180.4	180.0
C3	C5	C01	C7	37.6	304.8
C6	C5	C01	C7	222.6	124.3
C5	C01	C7	C06	180.3	180.1
C01	C7	C8	C9	0.2	360.0
C8	C7	C01	H4	180.0	179.7
C01	C7	C8	H7	180.1	180.0
C7	C01	C06	C10	359.6	0.1
C7	C01	C06	H14	179.6	180.0
C9	C8	C7	C01	0.2	360.0
C9	C8	C7	H4	180.1	179.7
C7	C8	C9	H7	180.0	180.0
C8	C9	C10	C11	176.3	180.0
C10	C9	C8	H6	180.0	180.0
C7	C01	C06	C5	180.3	180.1
C06	C01	C7	H4	179.9	180.3
C01	C06	C10	C11	183.7	180.0
C05	O	C03	H11	59.6	61.2
O	C05	C4	H2	183.2	183.2
O	C05	C4	H3	63.3	63.1
C4	C05	O	H12	239.8	119.8
C4	C05	O	H13	120.2	240.1
H12	C05	O	H13	240.4	120.2
C03	O	C05	C4	62.3	58.7
N2	C4	C05	H2	120.0	119.9
N2	C4	C05	H3	239.9	240.0
O	C05	C4	H12	120.2	240.1
O	C05	C4	H13	239.8	119.9
H2	C4	C05	H3	119.9	120.1
H12	C05	C4	H13	119.6	239.8
C8	C9	C10	H6	180.0	180.0
C01	C06	C10	C9	0.9	359.9
C06	C10	C9	C11	182.8	180.1
C9	C10	C11	N02	321.6	351.3
C01	C06	C10	H14	180.0	179.9
C9	C10	C06	C11	177.3	179.9
C06	C10	C9	H6	179.0	180.0
C06	C10	C11	N02	138.9	171.3
C11	C10	C9	H6	356.3	360.0
H1	N3	C6	C5	180.1	180.1
H1	N3	C6	H5	0.1	360.0
N2	C4	H2	C05	239.8	240.2
N2	C4	H2	H3	119.9	120.2
H2	C4	C05	O	183.2	183.2
C05	C4	H2	H3	240.1	240.0
H2	C4	C05	H12	63.0	303.1
H2	C4	C05	H13	303.4	63.3
N2	C4	H3	C05	120.3	119.8
N2	C4	H3	H2	240.1	239.8
H3	C4	C05	O	63.3	63.1
C05	C4	H3	H2	119.9	120.0
H3	C4	C05	H12	303.1	183.0
H3	C4	C05	H13	183.5	303.2
H4	C7	C01	C5	0.2	0.3
C8	C7	H4	C01	180.0	180.3
H4	C7	C8	C9	180.1	179.7
H4	C7	C8	H7	0.1	359.7
H4	C7	C01	C06	179.9	180.3
N3	C6	H5	C5	180.0	180.1
H5	C6	N3	H1	0.1	360.0
H5	C6	C5	C3	179.1	179.7
H5	C6	C5	C01	354.9	0.1
C8	C9	H6	C10	180.0	180.0
H6	C9	C10	C11	356.3	360.0
H7	C8	C7	C01	180.1	180.0
C7	C8	H7	C9	180.0	180.0
H7	C8	C7	H4	0.1	359.7
H7	C8	C9	C10	180.4	180.0
H7	C8	C9	H6	0.5	360.0
H8	C04	N1	C1	180.4	180.0
H9	C2	C03	O	176.2	296.9
C03	C2	H9	H10	119.9	239.9
H9	C2	C03	H11	54.5	177.0
H10	C2	C03	O	296.1	176.8
C03	C2	H10	H9	240.1	120.1
H10	C2	C03	H11	174.4	56.9
C16	C03	H11	C2	123.8	120.1
C2	C03	H11	O	120.3	119.8
H11	C03	C2	H9	54.5	177.0
H11	C03	C2	H10	174.4	56.9
C16	C03	H11	O	244.2	239.9
H11	C03	O	C05	59.6	61.2
C4	C05	H12	O	121.0	240.3
O	C05	H12	H13	119.5	239.8
H12	C05	C4	H2	63.0	303.1
H12	C05	C4	H3	303.1	183.0
C4	C05	H12	H13	240.5	120.1
C4	C05	H13	O	239.0	119.7
O	C05	H13	H12	240.5	120.2
H13	C05	C4	H2	303.4	63.3
H13	C05	C4	H3	183.5	303.2
C4	C05	H13	H12	119.5	239.9
C01	C06	H14	C10	180.0	180.1
H14	C06	C10	C11	3.7	0.1
C14	C	H15	H16	120.0	120.1
C14	C	H15	H17	240.0	240.0
H16	C	H15	H17	120.0	119.9
C14	C	H16	H15	240.0	239.9
C14	C	H16	H17	120.0	120.0
H15	C	H16	H17	240.0	240.1
C14	C	H17	H15	120.0	120.0
C14	C	H17	H16	240.0	240.0
H15	C	H17	H16	120.0	119.9