PDB Chemical Component 3JA

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 3JA

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N2 C4 1.351 1.307
N2 N1 1.346 1.401
C4 C3 1.405 1.408
C1 N1 1.481 1.464
N1 C2 1.367 1.350
C13 O1 1.412 1.430
C13 C14 1.570 1.531
C3 C2 1.409 1.364
C3 C5 1.424 1.486
O1 C12 1.432 1.430
C14 N6 1.520 1.470
C5 C6 1.401 1.353
C5 C8 1.434 1.468
C6 N3 1.377 1.371
C12 C11 1.550 1.531
N6 C11 1.528 1.471
N6 C9 1.434 1.383
C8 C9 1.464 1.402
C8 C7 1.422 1.406
N3 C7 1.394 1.368
C9 N4 1.357 1.331
C7 N5 1.362 1.333
N4 C10 1.367 1.321
N5 C10 1.350 1.316
N3 H1 1.000 0.970
C4 H2 1.080 1.081
C6 H3 1.080 1.080
C13 H4 1.100 1.090
C13 H5 1.100 1.090
C1 H6 1.100 1.090
C1 H7 1.100 1.090
C1 H8 1.100 1.090
C2 H9 1.080 1.080
C10 H10 1.080 1.080
C11 H11 1.100 1.090
C11 H12 1.100 1.090
C12 H13 1.100 1.090
C12 H14 1.100 1.090
C14 H15 1.100 1.090
C14 H16 1.100 1.089

Bond Angles for 3JA

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
N2 C4 C3 109.4 108.2
N2 C4 H2 125.3 125.9
N2 N1 C1 122.8 125.9
N2 N1 C2 111.9 108.2
C4 C3 C2 106.2 107.6
C4 C3 C5 129.5 126.2
C3 C4 H2 125.3 125.9
C1 N1 C2 125.3 126.0
N1 C1 H6 109.5 109.5
N1 C1 H7 109.4 109.5
N1 C1 H8 109.5 109.5
N1 C2 H9 127.2 126.2
O1 C13 C14 109.8 109.3
C13 O1 C12 117.3 113.7
O1 C13 H4 109.4 109.5
O1 C13 H5 109.4 109.5
C13 C14 N6 105.7 109.3
C14 C13 H4 109.4 109.4
C14 C13 H5 109.4 109.5
C13 C14 H15 110.4 109.5
C13 C14 H16 110.4 109.5
C3 C2 H9 127.3 126.2
O1 C12 H13 109.2 109.5
O1 C12 H14 109.2 109.6
C5 C6 H3 125.9 125.2
C6 N3 H1 125.5 124.9
C12 C11 H11 110.4 109.5
C12 C11 H12 110.4 109.6
N6 C11 H11 110.4 109.4
N6 C11 H12 110.4 109.5
C8 C9 N4 121.4 118.3
C8 C7 N5 125.4 118.5
N3 C7 N5 125.6 134.1
C7 N3 H1 125.5 124.9
C9 N4 C10 117.8 121.0
C7 N5 C10 115.1 120.7
N5 C10 N4 126.6 122.7
N4 C10 H10 116.7 118.6
N5 C10 H10 116.7 118.7
H4 C13 H5 109.5 109.6
H6 C1 H7 109.5 109.4
H6 C1 H8 109.5 109.5
H7 C1 H8 109.5 109.4
H11 C11 H12 109.5 109.5
H13 C12 H14 109.4 109.5
H15 C14 H16 109.5 109.6

Torsion Angles for 3JA

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
N2 C4 C3 C2 359.2 360.0
N2 C4 C3 C5 176.6 179.7
C3 C4 N2 H2 180.0 180.3
N1 N2 C4 C3 0.0 0.0
N1 N2 C4 H2 180.0 179.7
C1 N1 N2 C2 181.5 180.0
N2 N1 C1 H6 0.0 90.0
N2 N1 C1 H7 120.0 209.9
N2 N1 C1 H8 240.0 329.9
N2 N1 C2 H9 178.7 179.9
N2 C4 C3 H2 180.0 179.7
C4 C3 C2 H9 181.3 180.1
N2 N1 C1 C2 178.3 180.0
C1 N1 C2 H9 357.2 359.9
H6 C1 N1 H7 240.0 240.0
H6 C1 N1 H8 120.0 120.1
H7 C1 N1 H8 240.0 240.0
N2 N1 C2 C1 181.5 180.0
C4 C3 C2 N1 1.2 360.0
C2 N1 C1 H6 181.7 270.0
C2 N1 C1 H7 301.7 30.0
C2 N1 C1 H8 61.6 149.9
C3 C2 N1 H9 180.0 180.1
O1 C13 C14 N6 303.5 303.2
C14 C13 O1 H4 240.0 240.1
C14 C13 O1 H5 120.0 119.9
O1 C13 C14 H15 62.9 63.0
O1 C13 C14 H16 184.1 183.2
C13 O1 C12 H13 63.1 181.4
C13 O1 C12 H14 182.8 61.2
H4 C13 O1 H5 240.0 239.8
C14 C13 O1 C12 57.2 58.7
O1 C13 C14 H4 120.0 119.9
O1 C13 C14 H5 240.0 240.0
H4 C13 C14 H5 119.9 120.1
H15 C14 C13 H16 238.8 239.8
C4 C3 C2 C5 177.6 179.8
C2 C3 C4 H2 179.2 180.3
N1 C2 C3 H9 180.0 179.9
C4 C3 C5 C2 183.0 180.3
C5 C3 C4 H2 356.6 0.0
C5 C3 C2 H9 3.7 0.3
C3 C5 C6 H3 352.7 359.9
C12 O1 C13 C14 57.2 58.7
C12 O1 C13 H4 177.2 178.5
C12 O1 C13 H5 297.2 298.8
O1 C12 C11 H11 174.6 296.9
O1 C12 C11 H12 295.8 176.8
H13 C12 O1 H14 240.3 120.2
N6 C14 C13 H4 183.4 183.3
N6 C14 C13 H5 63.5 63.1
C13 C14 N6 H15 119.4 119.9
C13 C14 N6 H16 240.6 240.0
C14 N6 C11 H11 178.5 61.4
C14 N6 C11 H12 57.3 181.4
C4 C3 C5 C6 49.2 124.6
C5 C6 N3 H1 180.9 180.3
C4 C3 C5 C8 221.6 304.8
C8 C5 C6 H3 179.0 179.7
C5 C8 C9 N4 186.6 180.5
C6 N3 C7 N5 182.5 180.3
C7 N3 C6 H1 180.0 179.7
C13 O1 C12 C11 303.0 301.3
N6 C11 C12 H11 240.6 119.9
N6 C11 C12 H12 119.4 240.0
H11 C11 C12 H12 238.8 120.1
C13 C14 N6 C11 62.5 58.6
C12 C11 N6 H11 119.4 240.1
C12 C11 N6 H12 240.6 120.0
H11 C11 N6 H12 121.2 240.0
C9 C8 C7 N5 359.9 0.0
C8 C9 N4 C10 357.8 0.1
N3 C7 C8 N5 182.9 180.0
C8 C7 N3 H1 179.6 180.0
C8 C7 N5 C10 358.8 0.0
C6 N3 C7 H1 180.0 180.3
C8 C7 N3 N5 177.1 180.0
N3 C7 N5 C10 175.4 180.0
N5 C10 N4 C9 0.8 360.0
C9 N4 C10 H10 180.8 179.9
N5 C7 N3 H1 2.5 360.0
C7 N5 C10 N4 0.9 360.0
C7 N5 C10 H10 180.9 180.0
N5 C10 N4 H10 180.0 180.0
C9 N4 C10 N5 0.8 360.0
N4 C10 N5 H10 180.0 180.0
H1 N3 C7 N5 2.5 360.0
N2 C4 H2 C3 180.0 180.4
H2 C4 C3 C2 179.2 180.3
H2 C4 C3 C5 356.6 0.0
H3 C6 N3 H1 0.9 0.3
O1 C13 H4 C14 239.7 240.2
H4 C13 O1 C12 177.2 178.5
O1 C13 H4 H5 119.9 120.2
H4 C13 C14 N6 183.4 183.3
C14 C13 H4 H5 240.2 239.9
H4 C13 C14 H15 302.8 303.1
H4 C13 C14 H16 64.0 63.3
O1 C13 H5 C14 120.3 119.8
H5 C13 O1 C12 297.2 298.8
O1 C13 H5 H4 240.1 239.8
H5 C13 C14 N6 63.5 63.1
C14 C13 H5 H4 119.8 120.0
H5 C13 C14 H15 182.9 183.0
H5 C13 C14 H16 304.1 303.2
H6 C1 N1 C2 181.7 270.0
N1 C1 H6 H7 120.0 120.0
N1 C1 H6 H8 240.0 239.9
H7 C1 H6 H8 120.0 120.0
H7 C1 N1 C2 301.7 30.0
N1 C1 H7 H6 240.0 240.0
N1 C1 H7 H8 120.0 120.0
H6 C1 H7 H8 240.0 240.0
H8 C1 N1 C2 61.6 149.9
N1 C1 H8 H6 120.0 120.1
N1 C1 H8 H7 240.0 240.0
H6 C1 H8 H7 120.0 120.0
N5 C10 H10 N4 180.0 180.0
C12 C11 H11 H12 121.7 239.8
N6 C11 H11 H12 238.3 120.0
C12 C11 H12 H11 238.3 120.2
N6 C11 H12 H11 121.7 240.0
O1 C12 H13 H14 119.5 239.8
H13 C12 C11 H11 54.5 56.9
H13 C12 C11 H12 175.7 296.7
O1 C12 H14 H13 240.5 120.2
H14 C12 C11 H11 294.8 177.0
H14 C12 C11 H12 56.0 56.8
C13 C14 H15 N6 243.5 240.2
H15 C14 C13 H4 302.8 303.1
H15 C14 C13 H5 182.9 183.0
C13 C14 H15 H16 121.8 120.2
C13 C14 H16 N6 116.5 119.8
H16 C14 C13 H4 64.0 63.3
H16 C14 C13 H5 304.1 303.2
C13 C14 H16 H15 238.2 239.8