PDB Chemical Component 3EB
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 3EB
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C |
O |
1.287 |
1.342 |
| C |
CA |
1.502 |
1.507 |
| C |
OXT |
1.236 |
1.209 |
| CA |
C2 |
1.540 |
1.530 |
| OAB |
CAL |
1.245 |
1.215 |
| OAD |
CAL |
1.290 |
1.347 |
| CAE |
CAF |
1.390 |
1.384 |
| CAE |
CAG |
1.394 |
1.382 |
| CAF |
CAH |
1.383 |
1.380 |
| CAG |
CAM |
1.394 |
1.379 |
| CAG |
C2 |
1.520 |
1.508 |
| CAH |
CAN |
1.392 |
1.396 |
| CAL |
CAN |
1.503 |
1.477 |
| CAM |
CAN |
1.395 |
1.397 |
| O |
H |
0.950 |
0.967 |
| CA |
HA1C |
1.100 |
1.089 |
| CA |
HA2C |
1.100 |
1.090 |
| C2 |
H21C |
1.100 |
1.090 |
| C2 |
H22C |
1.100 |
1.090 |
| OAD |
HAD |
0.950 |
0.966 |
| CAE |
HAE |
1.080 |
1.080 |
| CAF |
HAF |
1.080 |
1.080 |
| CAH |
HAH |
1.080 |
1.080 |
| CAM |
HAM |
1.080 |
1.080 |
Bond Angles for 3EB
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O |
C |
CA |
115.4 |
120.0 |
| O |
C |
OXT |
122.2 |
120.0 |
| C |
O |
H |
109.5 |
117.1 |
| CA |
C |
OXT |
122.4 |
120.0 |
| C |
CA |
C2 |
112.3 |
109.4 |
| C |
CA |
HA1C |
108.8 |
109.4 |
| C |
CA |
HA2C |
108.8 |
109.5 |
| CA |
C2 |
CAG |
116.1 |
109.4 |
| C2 |
CA |
HA1C |
108.7 |
109.5 |
| C2 |
CA |
HA2C |
108.7 |
109.5 |
| CA |
C2 |
H21C |
107.8 |
109.5 |
| CA |
C2 |
H22C |
107.8 |
109.5 |
| OAB |
CAL |
OAD |
121.9 |
120.0 |
| OAB |
CAL |
CAN |
120.6 |
120.0 |
| OAD |
CAL |
CAN |
117.4 |
120.0 |
| CAL |
OAD |
HAD |
109.5 |
117.0 |
| CAF |
CAE |
CAG |
120.6 |
120.3 |
| CAE |
CAF |
CAH |
120.4 |
120.1 |
| CAF |
CAE |
HAE |
119.7 |
119.8 |
| CAE |
CAF |
HAF |
119.8 |
120.0 |
| CAE |
CAG |
CAM |
118.3 |
120.2 |
| CAE |
CAG |
C2 |
122.1 |
119.9 |
| CAG |
CAE |
HAE |
119.7 |
119.9 |
| CAF |
CAH |
CAN |
120.2 |
119.8 |
| CAH |
CAF |
HAF |
119.8 |
119.9 |
| CAF |
CAH |
HAH |
119.9 |
120.1 |
| CAM |
CAG |
C2 |
119.6 |
119.9 |
| CAG |
CAM |
CAN |
121.6 |
119.8 |
| CAG |
CAM |
HAM |
119.2 |
120.1 |
| CAG |
C2 |
H21C |
107.8 |
109.4 |
| CAG |
C2 |
H22C |
107.8 |
109.4 |
| CAH |
CAN |
CAL |
121.0 |
120.1 |
| CAH |
CAN |
CAM |
118.9 |
119.7 |
| CAN |
CAH |
HAH |
119.9 |
120.1 |
| CAL |
CAN |
CAM |
120.1 |
120.2 |
| CAN |
CAM |
HAM |
119.2 |
120.1 |
| HA1C |
CA |
HA2C |
109.5 |
109.6 |
| H21C |
C2 |
H22C |
109.5 |
109.5 |
Torsion Angles for 3EB
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
C |
O |
OXT |
177.9 |
180.3 |
| O |
C |
CA |
C2 |
140.3 |
180.0 |
| O |
C |
CA |
HA1C |
260.7 |
299.9 |
| O |
C |
CA |
HA2C |
19.9 |
60.0 |
| O |
C |
CA |
OXT |
182.1 |
179.7 |
| CA |
C |
O |
H |
177.9 |
180.1 |
| C |
CA |
C2 |
CAG |
294.7 |
180.0 |
| C2 |
CA |
C |
HA1C |
239.6 |
240.0 |
| C2 |
CA |
C |
HA2C |
120.4 |
120.0 |
| C |
CA |
C2 |
H21C |
55.7 |
300.0 |
| C |
CA |
C2 |
H22C |
173.8 |
60.0 |
| HA1C |
CA |
C |
HA2C |
240.8 |
239.9 |
| O |
C |
OXT |
CA |
177.7 |
180.3 |
| OXT |
C |
O |
H |
0.0 |
359.8 |
| OXT |
C |
CA |
C2 |
318.2 |
0.3 |
| OXT |
C |
CA |
HA1C |
78.6 |
120.3 |
| OXT |
C |
CA |
HA2C |
197.7 |
240.3 |
| C2 |
CA |
C |
OXT |
318.2 |
0.3 |
| C |
CA |
C2 |
HA1C |
120.4 |
119.9 |
| C |
CA |
C2 |
HA2C |
239.6 |
240.0 |
| CAE |
CAG |
C2 |
CA |
325.4 |
90.0 |
| CAM |
CAG |
C2 |
CA |
147.6 |
270.0 |
| CAG |
C2 |
CA |
H21C |
239.0 |
240.0 |
| CAG |
C2 |
CA |
H22C |
121.0 |
120.0 |
| HA1C |
CA |
C2 |
HA2C |
119.1 |
120.1 |
| H21C |
C2 |
CA |
H22C |
241.9 |
239.9 |
| OAD |
CAL |
OAB |
CAN |
176.0 |
180.0 |
| OAB |
CAL |
OAD |
HAD |
360.0 |
0.1 |
| CAH |
CAN |
CAL |
OAB |
165.6 |
180.0 |
| OAB |
CAL |
CAN |
CAM |
346.0 |
0.0 |
| OAB |
CAL |
OAD |
CAN |
183.9 |
180.0 |
| CAH |
CAN |
CAL |
OAD |
349.4 |
0.0 |
| OAD |
CAL |
CAN |
CAM |
169.8 |
180.1 |
| CAF |
CAE |
CAG |
CAM |
0.5 |
0.0 |
| CAF |
CAE |
CAG |
C2 |
182.7 |
180.0 |
| CAG |
CAE |
CAF |
HAE |
180.0 |
180.3 |
| CAE |
CAF |
CAH |
CAN |
358.0 |
360.0 |
| CAH |
CAF |
CAE |
HAF |
180.0 |
180.1 |
| CAE |
CAF |
CAH |
HAH |
178.0 |
179.9 |
| CA |
C2 |
CAG |
CAE |
325.4 |
90.0 |
| CAG |
CAE |
CAF |
CAH |
0.4 |
0.0 |
| CAF |
CAE |
CAG |
HAE |
180.0 |
179.7 |
| CAG |
CAE |
CAF |
HAF |
180.4 |
180.0 |
| CAM |
CAG |
CAE |
C2 |
177.8 |
180.0 |
| CAE |
CAG |
CAM |
CAN |
0.1 |
359.9 |
| CAE |
CAG |
CAM |
HAM |
180.1 |
180.0 |
| CAE |
CAG |
C2 |
H21C |
204.4 |
330.0 |
| CAE |
CAG |
C2 |
H22C |
86.4 |
210.0 |
| CAH |
CAF |
CAE |
CAG |
0.4 |
0.0 |
| CAH |
CAF |
CAE |
HAE |
180.4 |
179.7 |
| CAE |
CAF |
CAH |
HAF |
180.0 |
179.9 |
| CAF |
CAH |
CAN |
CAL |
183.1 |
180.0 |
| CAF |
CAH |
CAN |
CAM |
2.7 |
360.0 |
| CAN |
CAH |
CAF |
HAH |
180.0 |
180.0 |
| CA |
C2 |
CAG |
CAM |
147.6 |
270.0 |
| CAE |
CAG |
CAM |
C2 |
182.1 |
180.0 |
| CAM |
CAG |
CAE |
HAE |
180.6 |
180.3 |
| CAM |
CAG |
C2 |
H21C |
26.7 |
150.0 |
| CAM |
CAG |
C2 |
H22C |
268.6 |
29.9 |
| CAH |
CAN |
CAM |
CAG |
358.2 |
0.1 |
| CAL |
CAN |
CAM |
CAG |
177.8 |
180.0 |
| CAN |
CAM |
CAG |
HAM |
180.0 |
180.0 |
| CAG |
C2 |
CA |
HA1C |
174.3 |
60.1 |
| CAG |
C2 |
CA |
HA2C |
55.2 |
300.0 |
| CA |
C2 |
CAG |
H21C |
121.0 |
120.0 |
| CA |
C2 |
CAG |
H22C |
239.0 |
240.0 |
| CAE |
CAG |
C2 |
CAM |
177.8 |
180.0 |
| C2 |
CAG |
CAE |
HAE |
2.8 |
0.3 |
| C2 |
CAG |
CAM |
CAN |
178.0 |
180.0 |
| C2 |
CAG |
CAM |
HAM |
358.0 |
0.0 |
| H21C |
C2 |
CAG |
H22C |
118.1 |
120.0 |
| OAB |
CAL |
CAN |
CAH |
165.6 |
180.0 |
| OAD |
CAL |
CAN |
CAH |
349.4 |
0.0 |
| CAN |
CAH |
CAF |
HAF |
177.9 |
180.0 |
| CAF |
CAH |
CAN |
HAH |
180.0 |
180.0 |
| CAG |
CAM |
CAN |
CAH |
358.2 |
0.1 |
| CAL |
CAN |
CAH |
CAM |
180.4 |
180.1 |
| CAH |
CAN |
CAM |
HAM |
178.3 |
180.0 |
| OAB |
CAL |
CAN |
OAD |
176.2 |
180.0 |
| CAN |
CAL |
OAD |
HAD |
176.1 |
180.0 |
| CAG |
CAM |
CAN |
CAL |
177.8 |
180.0 |
| CAH |
CAN |
CAL |
CAM |
179.5 |
179.9 |
| CAL |
CAN |
CAH |
HAH |
3.1 |
0.1 |
| CAL |
CAN |
CAM |
HAM |
357.8 |
360.0 |
| CAN |
CAM |
CAG |
C2 |
178.0 |
180.0 |
| CAG |
CAM |
CAN |
HAM |
180.0 |
180.0 |
| CAH |
CAN |
CAM |
CAL |
180.4 |
180.1 |
| CAM |
CAN |
CAH |
HAH |
182.7 |
180.0 |
| H |
O |
C |
CA |
177.9 |
180.1 |
| H |
O |
C |
OXT |
0.0 |
359.8 |
| HA1C |
CA |
C |
OXT |
78.6 |
120.3 |
| C |
CA |
HA1C |
C2 |
237.4 |
240.1 |
| C |
CA |
HA1C |
HA2C |
118.7 |
120.0 |
| HA1C |
CA |
C2 |
CAG |
174.3 |
60.1 |
| C2 |
CA |
HA1C |
HA2C |
241.3 |
239.9 |
| HA1C |
CA |
C2 |
H21C |
295.2 |
180.0 |
| HA1C |
CA |
C2 |
H22C |
53.3 |
300.1 |
| HA2C |
CA |
C |
OXT |
197.7 |
240.3 |
| C |
CA |
HA2C |
C2 |
122.6 |
120.0 |
| C |
CA |
HA2C |
HA1C |
241.3 |
240.0 |
| HA2C |
CA |
C2 |
CAG |
55.2 |
300.0 |
| C2 |
CA |
HA2C |
HA1C |
118.7 |
120.1 |
| HA2C |
CA |
C2 |
H21C |
176.1 |
59.9 |
| HA2C |
CA |
C2 |
H22C |
294.2 |
180.0 |
| CA |
C2 |
H21C |
CAG |
234.0 |
240.0 |
| H21C |
C2 |
CA |
HA1C |
295.2 |
180.0 |
| H21C |
C2 |
CA |
HA2C |
176.1 |
59.9 |
| CA |
C2 |
H21C |
H22C |
117.0 |
120.1 |
| CAG |
C2 |
H21C |
H22C |
243.0 |
240.0 |
| CA |
C2 |
H22C |
CAG |
126.0 |
120.0 |
| H22C |
C2 |
CA |
HA1C |
53.3 |
300.1 |
| H22C |
C2 |
CA |
HA2C |
294.2 |
180.0 |
| CA |
C2 |
H22C |
H21C |
243.0 |
239.9 |
| CAG |
C2 |
H22C |
H21C |
117.0 |
120.0 |
| HAD |
OAD |
CAL |
CAN |
176.1 |
180.0 |
| CAF |
CAE |
HAE |
CAG |
180.0 |
180.3 |
| HAE |
CAE |
CAF |
CAH |
180.4 |
179.7 |
| HAE |
CAE |
CAF |
HAF |
0.4 |
359.7 |
| HAE |
CAE |
CAG |
CAM |
180.6 |
180.3 |
| HAE |
CAE |
CAG |
C2 |
2.8 |
0.3 |
| HAF |
CAF |
CAE |
CAG |
180.4 |
180.0 |
| CAE |
CAF |
HAF |
CAH |
180.0 |
180.1 |
| HAF |
CAF |
CAE |
HAE |
0.4 |
359.7 |
| HAF |
CAF |
CAH |
CAN |
177.9 |
180.0 |
| HAF |
CAF |
CAH |
HAH |
358.0 |
360.0 |
| CAF |
CAH |
HAH |
CAN |
180.0 |
180.0 |
| HAH |
CAH |
CAF |
HAF |
358.0 |
360.0 |
| HAH |
CAH |
CAN |
CAL |
3.1 |
0.1 |
| HAH |
CAH |
CAN |
CAM |
182.7 |
180.0 |
| HAM |
CAM |
CAG |
C2 |
358.0 |
0.0 |
| CAG |
CAM |
HAM |
CAN |
180.0 |
180.0 |