PDB Chemical Component 3E8

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 3E8

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C30 C32 1.544 1.530
C30 C29 1.519 1.532
C32 N34 1.484 1.468
O26 C25 1.366 1.359
O26 C28 1.417 1.429
C24 C25 1.369 1.392
C24 N22 1.369 1.322
C25 C23 1.388 1.392
N22 C20 1.385 1.326
C28 C29 1.531 1.529
C23 N21 1.373 1.321
C29 C31 1.535 1.532
C20 N21 1.369 1.325
C20 C18 1.458 1.484
C16 C18 1.386 1.394
C16 C14 1.391 1.380
C18 C19 1.389 1.393
N34 C35 1.478 1.469
N34 C33 1.482 1.468
C13 C14 1.520 1.506
C13 N11 1.466 1.465
C5 C3 1.390 1.381
C5 C6 1.394 1.381
C14 C15 1.381 1.383
C3 C1 1.396 1.395
C19 C17 1.370 1.380
C6 C4 1.385 1.397
C31 C33 1.546 1.530
C15 C17 1.388 1.384
N9 N11 1.394 1.283
N9 C7 1.303 1.313
N11 C12 1.374 1.346
C1 C7 1.474 1.484
C1 C2 1.390 1.390
C4 C2 1.396 1.395
C4 C36 1.424 1.432
C7 C8 1.480 1.414
C36 N37 1.159 1.136
C12 O27 1.217 1.221
C12 C10 1.460 1.412
C8 C10 1.343 1.364
C2 H1 1.080 1.080
C3 H2 1.080 1.080
C5 H3 1.080 1.080
C6 H4 1.080 1.080
C8 H5 1.080 1.080
C15 H6 1.080 1.080
C16 H7 1.080 1.081
C17 H8 1.080 1.080
C19 H9 1.080 1.080
C23 H10 1.080 1.080
C24 H11 1.080 1.081
C30 H12 1.100 1.090
C30 H13 1.100 1.089
C31 H14 1.100 1.090
C31 H15 1.100 1.090
C32 H16 1.100 1.090
C32 H17 1.100 1.090
C33 H18 1.100 1.091
C33 H19 1.101 1.091
C35 H20 1.100 1.091
C35 H21 1.100 1.090
C35 H22 1.100 1.089
C10 H23 1.080 1.080
C13 H24 1.100 1.090
C13 H25 1.100 1.090
C28 H26 1.100 1.090
C28 H27 1.100 1.090
C29 H28 1.100 1.089

Bond Angles for 3E8

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C32 C30 C29 106.4 109.3
C30 C32 N34 111.4 109.5
C32 C30 H12 110.2 109.5
C32 C30 H13 110.2 109.5
C30 C32 H16 109.0 109.5
C30 C32 H17 109.0 109.5
C30 C29 C28 110.8 109.5
C30 C29 C31 108.7 109.1
C29 C30 H12 110.2 109.5
C29 C30 H13 110.2 109.5
C30 C29 H28 108.6 109.5
C32 N34 C35 109.8 111.0
C32 N34 C33 114.5 111.2
N34 C32 H16 109.0 109.4
N34 C32 H17 109.0 109.4
C25 O26 C28 120.9 117.0
C24 C25 O26 116.9 120.8
O26 C28 C29 113.5 109.5
O26 C28 H26 108.5 109.4
O26 C28 H27 108.5 109.4
C25 C24 H11 119.7 120.4
C24 N22 C20 118.3 120.8
C25 C23 N21 119.4 119.1
C25 C23 H10 120.3 120.4
N22 C20 N21 121.9 121.7
C29 C28 H26 108.4 109.5
C29 C28 H27 108.5 109.5
C28 C29 H28 108.4 109.5
C23 N21 C20 119.2 120.8
N21 C23 H10 120.3 120.4
C29 C31 H14 109.6 109.5
C29 C31 H15 109.6 109.5
C18 C16 C14 121.0 119.9
C16 C18 C19 119.7 119.7
C18 C16 H7 119.5 120.1
C16 C14 C13 121.1 120.0
C14 C16 H7 119.5 120.0
C18 C19 H9 120.2 120.0
N34 C35 H20 109.5 109.4
N34 C35 H21 109.5 109.5
N34 C35 H22 109.5 109.5
N34 C33 H18 109.6 109.4
N34 C33 H19 109.6 109.5
C14 C13 H24 109.5 109.5
C14 C13 H25 109.5 109.5
C5 C3 H2 120.1 119.9
C6 C5 H3 119.5 119.9
C5 C6 H4 120.6 119.9
C14 C15 H6 119.6 119.9
C3 C1 C7 119.0 120.0
C19 C17 H8 119.7 120.0
C6 C4 C36 120.2 120.1
C33 C31 H14 109.6 109.5
C33 C31 H15 109.6 109.5
C31 C33 H18 109.6 109.5
C31 C33 H19 109.6 109.5
C17 C15 H6 119.6 119.8
C15 C17 H8 119.8 119.9
N11 C12 O27 120.2 120.2
N11 C12 C10 116.4 119.5
C2 C1 C7 121.2 120.1
C1 C7 C8 123.1 119.9
C1 C2 H1 120.0 120.1
C4 C2 H1 120.1 120.1
C4 C36 N37 175.8 180.0
C7 C8 C10 120.5 118.2
C7 C8 H5 119.8 120.9
O27 C12 C10 123.4 120.2
C8 C10 C12 119.5 117.9
C12 C10 H23 120.3 121.0
C10 C8 H5 119.7 120.9
C8 C10 H23 120.2 121.1
H12 C30 H13 109.5 109.6
H14 C31 H15 109.5 109.5
H16 C32 H17 109.5 109.5
H18 C33 H19 109.5 109.4
H20 C35 H21 109.5 109.4
H20 C35 H22 109.5 109.4
H21 C35 H22 109.5 109.5
H24 C13 H25 109.5 109.5
H26 C28 H27 109.5 109.4

Torsion Angles for 3E8

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C32 C30 C29 C28 173.0 182.4
C32 C30 C29 C31 296.4 302.3
C29 C30 C32 H12 240.5 240.1
C29 C30 C32 H13 119.5 120.0
C32 C30 C29 H28 54.0 62.3
C30 C32 N34 C35 178.7 174.1
C30 C32 N34 C33 304.6 298.3
N34 C32 C30 H16 239.7 240.0
N34 C32 C30 H17 120.3 120.0
H12 C30 C32 H13 239.0 239.9
H16 C32 C30 H17 240.6 240.0
C29 C30 C32 N34 58.4 59.2
C32 C30 C29 H12 119.5 119.9
C32 C30 C29 H13 240.5 240.0
C29 C30 C32 H16 178.7 179.2
C29 C30 C32 H17 298.1 299.2
O26 C28 C29 C30 42.5 185.0
C30 C29 C28 H26 281.9 65.0
C30 C29 C28 H27 163.0 305.0
C28 C29 C30 H28 118.9 120.2
C30 C29 C31 H14 184.5 297.7
C30 C29 C31 H15 304.7 177.6
H12 C30 C29 H13 121.0 120.1
N34 C32 C30 C29 58.4 59.2
N34 C32 C30 H12 177.9 179.1
N34 C32 C30 H13 298.8 299.2
C30 C32 N34 H16 120.3 120.0
C30 C32 N34 H17 239.7 240.0
C32 N34 C35 H20 180.0 60.1
C32 N34 C35 H21 300.0 180.0
C32 N34 C35 H22 60.0 300.1
C32 N34 C33 H18 173.6 301.7
C32 N34 C33 H19 293.7 181.8
H16 C32 N34 H17 119.4 120.0
C25 O26 C28 C29 147.2 180.0
C25 O26 C28 H26 267.8 300.1
C25 O26 C28 H27 26.6 60.0
O26 C25 C24 H11 1.0 0.0
O26 C25 C23 N21 180.2 180.0
O26 C25 C23 H10 0.2 0.0
C30 C29 C28 O26 42.5 185.0
C24 C25 O26 C28 199.0 180.0
C29 C28 O26 H26 239.4 240.0
C29 C28 O26 H27 120.6 120.0
O26 C28 C29 H28 161.5 305.1
H26 C28 O26 H27 241.2 240.1
C25 C24 N22 C20 359.4 360.0
C24 C25 C23 N21 1.5 360.0
C24 C25 C23 H10 181.5 180.0
C24 N22 C20 N21 360.0 0.1
C25 C23 N21 C20 358.0 0.0
N21 C23 C25 H10 180.0 180.0
C23 N21 C20 N22 1.3 360.0
C30 C29 C28 C31 121.5 119.6
C28 C29 C30 H12 53.5 62.6
C28 C29 C30 H13 292.5 302.4
C30 C29 C28 H28 241.0 239.8
O26 C28 C29 H26 120.6 120.0
O26 C28 C29 H27 239.4 240.0
C28 C29 C31 H14 307.2 57.6
C28 C29 C31 H15 67.4 297.5
H26 C28 C29 H27 118.8 120.0
C25 C23 N21 H10 180.0 180.0
N22 C20 N21 C23 1.3 360.0
C30 C29 C31 C28 237.3 240.1
C31 C29 C30 H12 176.9 182.4
C31 C29 C30 H13 55.9 62.3
C30 C29 C31 H28 117.8 119.9
O26 C28 C29 C31 280.9 65.4
C33 C31 C29 H14 240.1 119.9
C33 C31 C29 H15 119.9 240.0
C29 C31 C33 H18 182.9 60.8
C29 C31 C33 H19 62.7 180.8
H14 C31 C29 H15 239.8 120.1
C20 N21 C23 H10 178.0 180.0
C20 C18 C16 H7 354.5 359.1
C20 C18 C19 H9 5.0 0.3
C18 C16 C14 C13 180.7 180.0
C14 C16 C18 H7 180.0 180.9
C16 C18 C19 H9 177.5 179.5
C14 C16 C18 C19 1.9 0.8
C18 C16 C14 H7 180.0 179.1
C16 C14 C13 H24 202.6 330.0
C16 C14 C13 H25 322.7 210.0
C16 C14 C15 H6 180.4 180.3
C19 C18 C16 C14 1.9 0.8
C19 C18 C16 H7 181.9 179.9
C18 C19 C17 H8 182.1 180.0
C32 N34 C35 C33 127.7 124.3
C35 N34 C32 H16 58.4 54.1
C35 N34 C32 H17 299.0 294.1
C35 N34 C33 H18 298.7 65.9
C35 N34 C33 H19 58.8 306.0
H20 C35 N34 H21 240.0 240.1
H20 C35 N34 H22 120.0 120.0
H21 C35 N34 H22 240.0 239.9
C32 N34 C33 C35 234.8 235.8
C33 N34 C32 H16 184.3 178.3
C33 N34 C32 H17 64.9 58.3
N34 C33 C31 H14 182.9 60.8
N34 C33 C31 H15 62.7 180.9
C31 C33 N34 H18 240.1 120.0
C31 C33 N34 H19 120.0 239.9
H18 C33 N34 H19 239.9 119.9
C13 C14 C16 H7 0.7 0.9
C13 C14 C15 H6 358.9 359.7
H24 C13 C14 H25 239.9 120.0
C16 C14 C13 N11 82.7 90.0
C5 C3 C1 C7 181.1 180.1
C6 C5 C3 H2 181.6 180.0
C5 C6 C4 C36 178.9 179.8
C17 C15 C14 H6 180.0 179.7
C14 C15 C17 H8 179.0 180.3
C2 C1 C3 C7 177.6 179.7
C3 C1 C7 C8 200.1 359.7
C3 C1 C2 H1 180.7 180.3
C16 C18 C19 C17 357.5 359.5
C19 C17 C15 H6 178.9 180.0
C15 C17 C19 H8 180.0 180.0
C6 C4 C2 H1 179.7 180.0
C6 C4 C36 N37 247.0 225.0
C30 C29 C31 C33 64.6 57.7
C32 N34 C33 C31 53.6 61.7
C29 C31 C33 H14 119.9 240.1
C29 C31 C33 H15 240.1 120.0
N34 C33 C31 H18 119.9 240.0
N34 C33 C31 H19 240.0 120.1
H14 C31 C33 H15 120.2 239.9
H18 C33 C31 H19 120.1 240.1
C14 C15 C17 H6 180.0 180.3
C19 C17 C15 H8 180.0 180.0
N9 N11 C12 O27 179.4 180.0
N9 N11 C12 C10 357.3 0.2
N9 C7 C8 C10 358.8 0.3
N9 C7 C8 H5 178.8 180.2
O27 C12 N11 C10 182.1 179.8
C8 C10 C12 N11 1.8 359.8
N11 C12 C10 H23 181.8 179.7
C7 C1 C2 H1 358.2 360.0
C1 C7 C8 C10 180.5 180.0
C1 C7 C8 H5 0.5 359.9
C3 C1 C2 C7 182.5 180.3
C2 C1 C7 C8 22.6 180.0
C4 C2 C1 H1 180.0 180.0
C4 C2 C1 C7 178.2 180.0
C1 C2 C4 H1 180.0 180.0
C36 C4 C2 H1 1.3 360.0
C7 C8 C10 C12 0.0 359.9
C10 C8 C7 H5 180.0 180.1
C7 C8 C10 H23 180.0 180.0
N11 C12 O27 C10 177.7 180.2
C8 C10 C12 O27 179.6 180.0
O27 C12 C10 H23 359.6 359.9
N11 C12 C10 O27 182.2 179.8
C12 C10 C8 H5 180.0 180.0
C8 C10 C12 H23 180.0 180.1
N11 C12 C10 C8 1.8 359.8
C7 C8 C10 H5 180.0 179.9
O27 C12 C10 C8 179.6 180.0
C12 C10 C8 H23 180.0 179.9
H1 C2 C1 C7 358.2 360.0
H2 C3 C1 C7 1.1 360.0
H3 C5 C3 H2 1.6 0.0
H3 C5 C6 H4 358.8 0.0
H4 C6 C5 H3 358.8 0.0
H4 C6 C4 C36 358.9 0.0
C7 C8 H5 C10 180.0 180.1
H5 C8 C10 C12 180.0 180.0
H5 C8 C10 H23 0.0 0.1
H6 C15 C17 H8 358.9 359.9
C18 C16 H7 C14 180.0 180.9
H7 C16 C18 C19 181.9 179.9
H7 C16 C14 C13 0.7 0.9
H8 C17 C15 H6 358.9 359.9
H9 C19 C17 H8 2.1 0.0
C25 C23 H10 N21 180.0 180.0
H10 C23 N21 C20 178.0 180.0
H11 C24 C25 O26 1.0 0.0
H11 C24 N22 C20 179.5 179.9
C32 C30 H12 C29 242.8 240.2
H12 C30 C32 N34 177.9 179.1
C32 C30 H12 H13 121.4 120.1
H12 C30 C32 H16 298.2 299.1
H12 C30 C32 H17 57.6 59.1
H12 C30 C29 C28 53.5 62.6
H12 C30 C29 C31 176.9 182.4
C29 C30 H12 H13 238.6 239.9
H12 C30 C29 H28 294.6 302.4
C32 C30 H13 C29 117.2 119.8
H13 C30 C32 N34 298.8 299.2
C32 C30 H13 H12 238.6 239.9
H13 C30 C32 H16 59.1 59.2
H13 C30 C32 H17 178.6 179.2
H13 C30 C29 C28 292.5 302.4
H13 C30 C29 C31 55.9 62.3
C29 C30 H13 H12 121.4 120.1
H13 C30 C29 H28 173.6 182.3
C29 C31 H14 H15 120.3 239.9
C33 C31 H14 H15 239.7 120.1
H14 C31 C33 H18 63.0 180.7
H14 C31 C33 H19 302.9 300.7
C29 C31 H15 H14 239.7 120.0
C33 C31 H15 H14 120.3 239.9
H15 C31 C33 H18 302.8 300.9
H15 C31 C33 H19 182.7 60.8
H16 C32 C30 C29 178.7 179.2
C30 C32 H16 N34 238.2 239.9
H16 C32 C30 H12 298.2 299.1
H16 C32 C30 H13 59.1 59.2
C30 C32 H16 H17 119.1 120.0
H16 C32 N34 C35 58.4 54.1
H16 C32 N34 C33 184.3 178.3
N34 C32 H16 H17 240.9 240.1
H17 C32 C30 C29 298.1 299.2
C30 C32 H17 N34 121.8 120.1
H17 C32 C30 H12 57.6 59.1
H17 C32 C30 H13 178.6 179.2
C30 C32 H17 H16 240.9 240.0
H17 C32 N34 C35 299.0 294.1
H17 C32 N34 C33 64.9 58.3
N34 C32 H17 H16 119.1 119.9
N34 C33 H18 H19 120.2 240.1
H18 C33 C31 H14 63.0 180.7
H18 C33 C31 H15 302.8 300.9
C31 C33 H18 H19 239.8 120.0
N34 C33 H19 H18 239.8 119.9
H19 C33 C31 H14 302.9 300.7
H19 C33 C31 H15 182.7 60.8
C31 C33 H19 H18 120.2 240.0
N34 C35 H20 H21 120.0 120.0
N34 C35 H20 H22 240.0 240.0
H21 C35 H20 H22 120.0 120.0
N34 C35 H21 H20 240.0 240.1
N34 C35 H21 H22 120.0 120.1
H20 C35 H21 H22 240.0 240.0
N34 C35 H22 H20 120.0 120.0
N34 C35 H22 H21 240.0 239.9
H20 C35 H22 H21 120.0 120.0
C8 C10 H23 C12 180.0 179.9
H23 C10 C8 H5 0.0 0.1
C14 C13 H24 H25 120.1 240.0
C14 C13 H25 H24 239.9 120.0
O26 C28 H26 C29 236.4 240.0
O26 C28 H26 H27 118.2 119.9
C29 C28 H26 H27 241.8 240.0
H26 C28 C29 H28 40.9 185.1
O26 C28 H27 C29 123.6 120.0
O26 C28 H27 H26 241.8 240.1
C29 C28 H27 H26 118.2 120.0
H27 C28 C29 H28 282.1 65.1
C30 C29 H28 C28 120.4 120.2
C30 C29 H28 C31 242.1 240.3
H28 C29 C30 H12 294.6 302.4
H28 C29 C30 H13 173.6 182.3
H28 C29 C28 H26 40.9 185.1
H28 C29 C28 H27 282.1 65.1
H28 C29 C31 H14 66.7 177.8
H28 C29 C31 H15 186.9 57.7