PDB Chemical Component 3DQ

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 3DQ

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
CAA	OAN	1.450	1.429
OAN	CAR	1.373	1.359
CAR	CAK	1.383	1.388
CAR	CAJ	1.391	1.387
CAK	CAI	1.392	1.382
CAI	CAQ	1.372	1.383
CAJ	CAH	1.386	1.381
CAH	CAQ	1.389	1.383
CAQ	CAL	1.515	1.508
CAL	CAU	1.545	1.530
CAU	CAP	1.541	1.512
CAU	CAV	1.578	1.533
CAP	OAC	1.248	1.207
CAP	CAT	1.534	1.513
CAT	OAF	1.447	1.430
CAT	CAS	1.537	1.533
CAS	OAE	1.431	1.428
CAS	CAM	1.533	1.529
CAM	CAV	1.544	1.530
CAV	CAO	1.542	1.507
CAV	OAG	1.471	1.429
CAO	OAD	1.264	1.342
CAO	OAB	1.266	1.208
CAA	HAA1	1.100	1.090
CAA	HAA2	1.100	1.090
CAA	HAA3	1.100	1.090
CAK	HAK	1.080	1.080
CAJ	HAJ	1.080	1.081
CAI	HAI	1.080	1.080
CAH	HAH	1.079	1.080
CAL	HAL1	1.100	1.090
CAL	HAL2	1.100	1.090
CAU	HAU	1.100	1.089
CAT	HAT	1.100	1.090
OAF	HAF	0.950	0.967
CAS	HAS	1.100	1.090
OAE	HAE	0.950	0.968
CAM	HAM1	1.100	1.090
CAM	HAM2	1.100	1.090
OAG	HAG	0.950	0.967
OAD	HAD	0.950	0.966

Bond Angles for 3DQ

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
CAA	OAN	CAR	119.0	117.0
OAN	CAA	HAA1	109.5	109.5
OAN	CAA	HAA2	109.4	109.5
OAN	CAA	HAA3	109.5	109.5
OAN	CAR	CAK	123.4	120.0
OAN	CAR	CAJ	118.3	120.1
CAK	CAR	CAJ	118.3	119.9
CAR	CAK	CAI	121.0	119.9
CAR	CAK	HAK	119.5	120.1
CAR	CAJ	CAH	121.0	120.0
CAR	CAJ	HAJ	119.5	120.0
CAK	CAI	CAQ	120.2	120.0
CAI	CAK	HAK	119.5	120.0
CAK	CAI	HAI	119.9	120.0
CAI	CAQ	CAH	119.7	120.1
CAI	CAQ	CAL	120.9	119.9
CAQ	CAI	HAI	119.9	120.0
CAJ	CAH	CAQ	119.8	120.0
CAH	CAJ	HAJ	119.5	120.0
CAJ	CAH	HAH	120.1	120.0
CAH	CAQ	CAL	119.4	119.9
CAQ	CAH	HAH	120.1	120.0
CAQ	CAL	CAU	111.0	109.4
CAQ	CAL	HAL1	109.1	109.4
CAQ	CAL	HAL2	109.1	109.5
CAL	CAU	CAP	108.8	109.6
CAL	CAU	CAV	112.9	109.6
CAU	CAL	HAL1	109.1	109.5
CAU	CAL	HAL2	109.0	109.5
CAL	CAU	HAU	108.3	109.7
CAP	CAU	CAV	110.2	108.6
CAU	CAP	OAC	121.6	120.9
CAU	CAP	CAT	117.3	118.3
CAP	CAU	HAU	108.4	109.6
CAU	CAV	CAM	109.6	109.4
CAU	CAV	CAO	109.8	109.5
CAU	CAV	OAG	108.4	109.5
CAV	CAU	HAU	108.0	109.8
OAC	CAP	CAT	121.1	120.8
CAP	CAT	OAF	111.4	109.6
CAP	CAT	CAS	109.1	108.6
CAP	CAT	HAT	108.3	109.6
OAF	CAT	CAS	110.3	109.6
OAF	CAT	HAT	109.4	109.6
CAT	OAF	HAF	109.5	114.0
CAT	CAS	OAE	108.4	109.5
CAT	CAS	CAM	111.4	109.4
CAS	CAT	HAT	108.2	109.8
CAT	CAS	HAS	108.9	109.5
OAE	CAS	CAM	108.9	109.5
OAE	CAS	HAS	110.3	109.5
CAS	OAE	HAE	109.5	114.0
CAS	CAM	CAV	110.2	109.9
CAM	CAS	HAS	108.9	109.5
CAS	CAM	HAM1	109.3	109.4
CAS	CAM	HAM2	109.3	109.4
CAM	CAV	CAO	112.0	109.5
CAM	CAV	OAG	107.7	109.4
CAV	CAM	HAM1	109.3	109.4
CAV	CAM	HAM2	109.3	109.4
CAO	CAV	OAG	109.3	109.5
CAV	CAO	OAD	117.1	120.0
CAV	CAO	OAB	118.2	120.0
CAV	OAG	HAG	109.5	114.0
OAB	CAO	OAD	124.8	120.0
CAO	OAD	HAD	109.5	117.0
HAA1	CAA	HAA2	109.4	109.5
HAA1	CAA	HAA3	109.5	109.5
HAA2	CAA	HAA3	109.5	109.5
HAL1	CAL	HAL2	109.5	109.5
HAM1	CAM	HAM2	109.5	109.3

Torsion Angles for 3DQ

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
CAA	OAN	CAR	CAK	6.4	180.0
CAA	OAN	CAR	CAJ	186.8	359.7
HAA1	CAA	OAN	HAA2	240.0	240.0
HAA1	CAA	OAN	HAA3	120.0	120.0
HAA2	CAA	OAN	HAA3	240.0	240.0
CAR	OAN	CAA	HAA1	180.0	60.0
CAR	OAN	CAA	HAA2	300.0	180.0
CAR	OAN	CAA	HAA3	60.0	300.0
CAK	CAR	OAN	CAJ	179.6	180.3
OAN	CAR	CAK	CAI	179.5	180.0
OAN	CAR	CAK	HAK	359.6	360.0
OAN	CAR	CAJ	CAH	179.9	180.0
OAN	CAR	CAJ	HAJ	359.9	0.0
OAN	CAR	CAK	CAJ	180.4	179.7
CAK	CAR	CAJ	CAH	0.2	359.7
CAK	CAR	CAJ	HAJ	180.2	179.7
CAR	CAK	CAI	CAQ	1.8	359.9
CAI	CAK	CAR	HAK	180.0	180.1
CAR	CAK	CAI	HAI	181.8	180.0
OAN	CAR	CAJ	CAK	179.6	180.3
CAJ	CAR	CAK	CAI	359.2	0.3
CAJ	CAR	CAK	HAK	179.2	180.2
CAR	CAJ	CAH	CAQ	359.4	0.0
CAH	CAJ	CAR	HAJ	180.0	180.0
CAR	CAJ	CAH	HAH	179.4	180.0
CAI	CAK	CAR	CAJ	359.2	0.3
CAR	CAK	CAI	HAK	180.0	179.9
CAK	CAI	CAQ	CAH	357.9	359.8
CAK	CAI	CAQ	CAL	179.4	180.0
CAQ	CAI	CAK	HAI	180.0	179.9
CAQ	CAI	CAK	HAK	181.8	180.0
CAK	CAI	CAQ	HAI	180.0	180.1
CAJ	CAH	CAQ	CAI	1.5	0.2
CAH	CAQ	CAI	CAL	178.5	179.8
CAI	CAQ	CAH	HAH	181.5	180.3
CAI	CAQ	CAL	CAU	109.4	90.0
CAI	CAQ	CAL	HAL1	229.7	210.0
CAI	CAQ	CAL	HAL2	349.2	330.0
CAR	CAJ	CAH	HAJ	180.0	180.0
CAI	CAQ	CAH	CAJ	1.5	0.2
CAJ	CAH	CAQ	CAL	180.0	180.0
CAQ	CAH	CAJ	HAH	180.0	180.0
CAI	CAQ	CAH	CAL	181.5	180.2
CAH	CAQ	CAI	HAI	177.9	179.7
CAQ	CAH	CAJ	HAJ	179.4	180.0
CAJ	CAH	CAQ	HAH	180.0	180.0
CAH	CAQ	CAL	CAU	290.9	270.2
CAH	CAQ	CAL	HAL1	51.2	30.2
CAH	CAQ	CAL	HAL2	170.7	150.2
CAI	CAQ	CAL	CAH	178.5	179.8
CAL	CAQ	CAI	HAI	359.4	359.9
CAL	CAQ	CAH	HAH	0.0	0.1
CAQ	CAL	CAU	CAP	296.5	294.2
CAQ	CAL	CAU	CAV	173.7	175.2
CAU	CAL	CAQ	HAL1	239.8	240.0
CAU	CAL	CAQ	HAL2	120.2	120.0
CAQ	CAL	CAU	HAU	54.2	54.7
HAL1	CAL	CAQ	HAL2	240.4	240.0
CAQ	CAL	CAU	HAL1	120.2	119.9
CAQ	CAL	CAU	HAL2	239.8	240.0
CAP	CAU	CAL	CAV	122.8	119.0
CAL	CAU	CAP	OAC	103.6	111.6
CAL	CAU	CAP	CAT	284.4	291.7
CAP	CAU	CAL	HAU	242.3	239.6
CAL	CAU	CAV	CAM	70.1	65.1
CAL	CAU	CAV	CAO	306.7	305.1
CAL	CAU	CAV	OAG	187.4	185.0
CAV	CAU	CAL	HAU	119.5	120.5
HAL1	CAL	CAU	HAL2	119.5	120.0
CAL	CAU	CAP	CAV	235.6	240.3
CAP	CAU	CAL	HAL1	176.3	174.3
CAP	CAU	CAL	HAL2	56.7	54.2
CAL	CAU	CAP	HAU	117.7	120.4
CAP	CAU	CAV	CAM	308.1	305.4
CAP	CAU	CAV	CAO	184.7	185.4
CAP	CAU	CAV	OAG	65.4	65.3
CAV	CAU	CAP	HAU	242.0	240.1
OAC	CAP	CAU	CAT	179.2	180.0
CAU	CAP	CAT	OAF	188.3	189.0
CAU	CAP	CAT	CAS	310.3	308.7
CAU	CAP	CAT	HAT	67.9	68.6
CAL	CAU	CAV	CAP	122.0	119.7
CAV	CAU	CAL	HAL1	53.5	55.2
CAV	CAU	CAL	HAL2	294.0	295.2
CAL	CAU	CAV	HAU	240.2	239.5
CAV	CAU	CAP	OAC	228.0	231.3
CAV	CAU	CAP	CAT	48.7	51.3
CAP	CAU	CAV	HAU	118.3	119.8
CAS	CAM	CAV	CAU	60.3	63.6
CAM	CAV	CAU	CAO	123.4	120.0
CAM	CAV	CAU	OAG	242.8	240.1
CAU	CAV	CAM	HAM1	300.1	303.4
CAU	CAV	CAM	HAM2	180.4	183.7
CAO	CAV	CAU	OAG	119.3	120.1
CAU	CAV	CAO	OAD	279.0	275.8
CAU	CAV	CAO	OAB	98.5	95.9
CAU	CAV	OAG	HAG	180.0	180.0
OAC	CAP	CAU	CAV	228.0	231.3
CAU	CAP	OAC	CAT	180.8	180.0
OAC	CAP	CAU	HAU	345.9	351.2
OAC	CAP	CAT	OAF	9.1	9.0
OAC	CAP	CAT	CAS	131.1	128.7
OAC	CAP	CAT	HAT	248.7	248.6
CAT	CAP	CAU	CAV	48.7	51.3
CAU	CAP	CAT	OAC	179.2	180.0
CAT	CAP	CAU	HAU	166.7	171.2
OAF	CAT	CAP	CAS	238.0	240.3
OAF	CAT	CAP	HAT	120.4	120.4
CAP	CAT	OAF	HAF	356.0	300.0
CAP	CAT	CAS	OAE	174.9	174.6
CAP	CAT	CAS	CAM	55.1	54.6
CAS	CAT	CAP	HAT	242.4	240.1
CAP	CAT	CAS	HAS	294.9	294.6
CAP	CAT	OAF	CAS	121.3	119.1
CAP	CAT	OAF	HAT	240.3	239.6
OAF	CAT	CAS	OAE	297.6	294.3
OAF	CAT	CAS	CAM	177.8	174.3
CAS	CAT	OAF	HAT	119.0	120.5
OAF	CAT	CAS	HAS	57.6	54.4
CAP	CAT	CAS	OAF	237.3	240.3
CAP	CAT	CAS	HAT	117.6	119.8
OAF	CAT	CAS	HAT	240.3	239.6
CAS	CAT	OAF	HAF	234.7	181.0
OAE	CAS	CAT	CAM	119.8	120.0
OAE	CAS	CAT	HAS	240.0	240.0
CAT	CAS	OAE	HAE	180.0	60.0
CAT	CAS	CAM	CAV	296.9	296.4
CAM	CAS	CAT	HAS	120.1	120.0
CAT	CAS	CAM	HAM1	57.1	56.6
CAT	CAS	CAM	HAM2	176.8	176.3
CAT	CAS	OAE	CAM	238.6	240.1
OAE	CAS	CAT	HAT	57.3	54.8
CAT	CAS	OAE	HAS	119.1	120.0
OAE	CAS	CAM	CAV	177.4	176.5
CAM	CAS	OAE	HAS	240.5	239.9
OAE	CAS	CAM	HAM1	297.5	296.6
OAE	CAS	CAM	HAM2	57.3	56.3
CAU	CAV	CAM	CAS	60.3	63.6
CAT	CAS	CAM	OAE	119.6	120.0
CAM	CAS	CAT	HAT	297.5	294.8
CAT	CAS	CAM	HAS	239.9	240.0
OAE	CAS	CAM	HAS	120.3	120.1
CAM	CAS	OAE	HAE	301.4	180.0
CAS	CAM	CAV	CAO	182.3	183.6
CAS	CAM	CAV	OAG	302.5	303.7
CAV	CAM	CAS	HAM1	239.9	239.9
CAV	CAM	CAS	HAM2	120.1	120.1
HAM1	CAM	CAS	HAM2	240.2	240.3
CAU	CAV	CAM	CAO	237.9	240.0
CAU	CAV	CAM	OAG	117.7	119.9
CAM	CAV	CAU	HAU	189.9	185.6
CAV	CAM	CAS	HAS	57.0	56.4
CAS	CAM	CAV	HAM1	120.1	120.1
CAS	CAM	CAV	HAM2	239.9	239.8
CAO	CAV	CAM	OAG	239.8	239.9
CAM	CAV	CAO	OAD	157.0	155.9
CAM	CAV	CAO	OAB	336.6	335.9
CAM	CAV	OAG	HAG	298.4	299.9
HAM1	CAM	CAV	HAM2	119.8	119.7
CAU	CAV	CAO	CAM	122.0	119.9
CAU	CAV	CAO	OAG	241.2	240.0
CAO	CAV	CAU	HAU	66.5	65.6
CAM	CAV	CAO	OAG	119.2	120.0
CAO	CAV	CAM	HAM1	62.2	63.4
CAO	CAV	CAM	HAM2	302.4	303.7
CAO	CAV	OAG	HAG	60.3	60.0
OAB	CAO	CAV	OAD	179.5	180.1
CAV	CAO	OAD	HAD	179.5	180.0
CAU	CAV	OAG	CAM	241.5	240.1
CAU	CAV	OAG	CAO	119.6	120.0
OAG	CAV	CAU	HAU	307.1	305.5
CAM	CAV	OAG	CAO	238.1	239.9
OAG	CAV	CAM	HAM1	182.4	183.5
OAG	CAV	CAM	HAM2	62.6	63.8
OAG	CAV	CAO	OAD	37.8	35.8
OAG	CAV	CAO	OAB	217.3	215.9
OAD	CAO	CAV	OAG	37.8	35.8
CAV	CAO	OAD	OAB	179.5	180.1
OAB	CAO	CAV	OAG	217.3	215.9
CAV	CAO	OAB	OAD	180.5	179.9
OAB	CAO	OAD	HAD	360.0	359.9
HAA1	CAA	OAN	CAR	180.0	60.0
OAN	CAA	HAA1	HAA2	120.0	120.0
OAN	CAA	HAA1	HAA3	240.0	240.0
HAA2	CAA	HAA1	HAA3	120.0	120.0
HAA2	CAA	OAN	CAR	300.0	180.0
OAN	CAA	HAA2	HAA1	240.0	240.0
OAN	CAA	HAA2	HAA3	120.0	120.0
HAA1	CAA	HAA2	HAA3	240.0	240.0
HAA3	CAA	OAN	CAR	60.0	300.0
OAN	CAA	HAA3	HAA1	120.1	120.0
OAN	CAA	HAA3	HAA2	240.0	240.0
HAA1	CAA	HAA3	HAA2	120.0	120.0
HAK	CAK	CAR	CAJ	179.2	180.2
CAR	CAK	HAK	CAI	180.0	180.1
HAK	CAK	CAI	CAQ	181.8	180.0
HAK	CAK	CAI	HAI	1.8	0.1
CAR	CAJ	HAJ	CAH	180.0	180.0
HAJ	CAJ	CAH	CAQ	179.4	180.0
HAJ	CAJ	CAH	HAH	359.4	360.0
CAK	CAI	HAI	CAQ	180.0	179.9
HAI	CAI	CAK	HAK	1.8	0.1
HAI	CAI	CAQ	CAH	177.9	179.7
HAI	CAI	CAQ	CAL	359.4	359.9
CAJ	CAH	HAH	CAQ	180.0	180.0
HAH	CAH	CAJ	HAJ	359.4	360.0
HAH	CAH	CAQ	CAL	0.0	0.1
CAQ	CAL	HAL1	CAU	238.6	240.1
CAQ	CAL	HAL1	HAL2	119.3	120.0
HAL1	CAL	CAU	CAP	176.3	174.3
HAL1	CAL	CAU	CAV	53.5	55.2
CAU	CAL	HAL1	HAL2	240.8	239.9
HAL1	CAL	CAU	HAU	294.0	294.7
CAQ	CAL	HAL2	CAU	121.4	120.0
CAQ	CAL	HAL2	HAL1	240.7	240.0
HAL2	CAL	CAU	CAP	56.7	54.2
HAL2	CAL	CAU	CAV	294.0	295.2
CAU	CAL	HAL2	HAL1	119.3	120.0
HAL2	CAL	CAU	HAU	174.4	174.7
CAL	CAU	HAU	CAP	242.0	239.6
CAL	CAU	HAU	CAV	122.6	120.4
HAU	CAU	CAL	HAL1	294.0	294.7
HAU	CAU	CAL	HAL2	174.4	174.7
CAP	CAU	HAU	CAV	240.6	240.8
HAU	CAU	CAP	OAC	345.9	351.2
HAU	CAU	CAP	CAT	166.7	171.2
HAU	CAU	CAV	CAM	189.9	185.6
HAU	CAU	CAV	CAO	66.5	65.6
HAU	CAU	CAV	OAG	307.1	305.5
CAP	CAT	HAT	OAF	121.6	120.4
CAP	CAT	HAT	CAS	241.9	240.8
OAF	CAT	HAT	CAS	120.2	120.4
HAT	CAT	OAF	HAF	115.7	60.4
HAT	CAT	CAS	OAE	57.3	54.8
HAT	CAT	CAS	CAM	297.5	294.8
HAT	CAT	CAS	HAS	177.3	174.8
HAF	OAF	CAT	CAS	234.7	181.0
HAF	OAF	CAT	HAT	115.7	60.4
CAT	CAS	HAS	OAE	241.1	240.0
CAT	CAS	HAS	CAM	121.7	119.9
HAS	CAS	CAT	HAT	177.3	174.8
OAE	CAS	HAS	CAM	240.5	239.9
HAS	CAS	OAE	HAE	60.9	300.0
HAS	CAS	CAM	CAV	57.0	56.4
HAS	CAS	CAM	HAM1	177.2	176.5
HAS	CAS	CAM	HAM2	296.9	296.3
HAE	OAE	CAS	CAM	301.4	180.0
HAE	OAE	CAS	HAS	60.9	300.0
CAS	CAM	HAM1	CAV	239.3	239.6
HAM1	CAM	CAS	HAS	177.2	176.5
CAS	CAM	HAM1	HAM2	119.6	119.8
HAM1	CAM	CAV	CAO	62.2	63.4
HAM1	CAM	CAV	OAG	182.4	183.5
CAV	CAM	HAM1	HAM2	240.3	240.2
CAS	CAM	HAM2	CAV	120.7	120.4
HAM2	CAM	CAS	HAS	296.9	296.3
CAS	CAM	HAM2	HAM1	240.3	240.2
HAM2	CAM	CAV	CAO	302.4	303.7
HAM2	CAM	CAV	OAG	62.6	63.8
CAV	CAM	HAM2	HAM1	119.7	119.8