PDB Chemical Component 3C6
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 3C6
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| OAX |
CAM |
1.184 |
1.216 |
| CAI |
CAH |
1.389 |
1.377 |
| CAI |
CAJ |
1.392 |
1.397 |
| CAH |
CAG |
1.393 |
1.395 |
| O |
C |
1.187 |
1.213 |
| CAM |
CAJ |
1.527 |
1.478 |
| CAM |
N |
1.446 |
1.348 |
| NZ |
CE |
1.457 |
1.470 |
| CAJ |
CAK |
1.382 |
1.397 |
| C |
CA |
1.531 |
1.507 |
| C |
NAW |
1.454 |
1.348 |
| CA |
N |
1.443 |
1.465 |
| CA |
CB |
1.520 |
1.531 |
| CD |
CE |
1.530 |
1.529 |
| CD |
CG |
1.527 |
1.531 |
| CAE |
NAD |
1.317 |
1.317 |
| CAE |
CAF |
1.384 |
1.394 |
| CAG |
CAF |
1.523 |
1.482 |
| CAG |
CAL |
1.386 |
1.394 |
| NAD |
CAC |
1.322 |
1.320 |
| CAF |
CAA |
1.389 |
1.399 |
| CAK |
CAL |
1.390 |
1.376 |
| CB |
CG |
1.529 |
1.530 |
| CAC |
CAB |
1.389 |
1.383 |
| CAA |
CAB |
1.391 |
1.384 |
| CAA |
H1 |
1.080 |
1.080 |
| CAB |
H2 |
1.080 |
1.080 |
| CAC |
H3 |
1.080 |
1.080 |
| CAE |
H4 |
1.080 |
1.080 |
| CAH |
H5 |
1.080 |
1.080 |
| CAI |
H6 |
1.080 |
1.080 |
| CAL |
H7 |
1.080 |
1.081 |
| CAK |
H8 |
1.080 |
1.081 |
| N |
H9 |
1.000 |
0.969 |
| CA |
H10 |
1.099 |
1.090 |
| NAW |
H11 |
1.000 |
0.969 |
| NAW |
H12 |
1.000 |
0.970 |
| CB |
H13 |
1.100 |
1.090 |
| CB |
H14 |
1.100 |
1.090 |
| CG |
H15 |
1.100 |
1.090 |
| CG |
H16 |
1.100 |
1.090 |
| CD |
H17 |
1.100 |
1.089 |
| CD |
H18 |
1.100 |
1.090 |
| CE |
H19 |
1.100 |
1.091 |
| CE |
H20 |
1.099 |
1.090 |
| NZ |
H21 |
1.000 |
1.009 |
| NZ |
H22 |
0.999 |
1.009 |
Bond Angles for 3C6
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| OAX |
CAM |
N |
120.0 |
120.0 |
| CAI |
CAH |
H5 |
120.1 |
120.0 |
| CAI |
CAJ |
CAK |
120.1 |
120.0 |
| CAJ |
CAI |
H6 |
120.1 |
120.0 |
| CAH |
CAG |
CAL |
120.2 |
120.0 |
| O |
C |
NAW |
119.6 |
120.0 |
| CAM |
N |
H9 |
120.2 |
120.0 |
| NZ |
CE |
H19 |
109.4 |
109.4 |
| NZ |
CE |
H20 |
109.4 |
109.5 |
| CAJ |
CAK |
H8 |
119.9 |
120.0 |
| C |
CA |
CB |
110.0 |
109.4 |
| C |
CA |
H10 |
109.2 |
109.4 |
| C |
NAW |
H11 |
120.0 |
120.0 |
| C |
NAW |
H12 |
120.0 |
119.9 |
| CA |
N |
H9 |
120.3 |
120.0 |
| CA |
CB |
CG |
111.4 |
109.4 |
| CB |
CA |
H10 |
109.4 |
109.5 |
| CA |
CB |
H13 |
109.0 |
109.5 |
| CA |
CB |
H14 |
109.0 |
109.4 |
| CE |
CD |
H17 |
108.8 |
109.5 |
| CE |
CD |
H18 |
108.7 |
109.5 |
| CD |
CE |
H19 |
109.4 |
109.5 |
| CD |
CE |
H20 |
109.4 |
109.6 |
| CD |
CG |
H15 |
108.5 |
109.5 |
| CD |
CG |
H16 |
108.5 |
109.5 |
| CAF |
CAE |
H4 |
119.8 |
119.7 |
| CAG |
CAL |
H7 |
120.1 |
120.0 |
| NAD |
CAC |
H3 |
119.1 |
119.5 |
| CAF |
CAA |
H1 |
120.2 |
120.8 |
| CAK |
CAL |
H7 |
120.1 |
120.0 |
| CG |
CB |
H13 |
109.0 |
109.5 |
| CG |
CB |
H14 |
109.0 |
109.5 |
| CB |
CG |
H15 |
108.5 |
109.5 |
| CB |
CG |
H16 |
108.5 |
109.5 |
| CAC |
CAB |
H2 |
121.3 |
120.3 |
| CAB |
CAA |
H1 |
120.2 |
120.9 |
| CAA |
CAB |
H2 |
121.3 |
120.3 |
| H11 |
NAW |
H12 |
120.0 |
120.0 |
| H13 |
CB |
H14 |
109.5 |
109.5 |
| H15 |
CG |
H16 |
109.5 |
109.5 |
| H17 |
CD |
H18 |
109.5 |
109.5 |
| H19 |
CE |
H20 |
109.5 |
109.4 |
| H21 |
NZ |
H22 |
109.5 |
111.0 |
Torsion Angles for 3C6
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| OAX |
CAM |
N |
H9 |
180.6 |
180.0 |
| CAI |
CAH |
CAG |
CAL |
0.2 |
0.3 |
| CAJ |
CAI |
CAH |
H5 |
179.3 |
180.0 |
| CAI |
CAJ |
CAK |
H8 |
179.1 |
180.3 |
| CAH |
CAG |
CAL |
H7 |
180.0 |
179.7 |
| O |
C |
CA |
CB |
275.8 |
120.0 |
| O |
C |
CA |
H10 |
35.9 |
240.0 |
| O |
C |
NAW |
H11 |
360.0 |
180.0 |
| O |
C |
NAW |
H12 |
180.0 |
0.0 |
| CAM |
CAJ |
CAI |
H6 |
359.1 |
360.0 |
| CAM |
CAJ |
CAK |
H8 |
1.0 |
0.1 |
| CA |
N |
CAM |
H9 |
180.0 |
180.0 |
| NZ |
CE |
CD |
H17 |
275.7 |
60.1 |
| NZ |
CE |
CD |
H18 |
34.8 |
300.0 |
| CD |
CE |
NZ |
H19 |
239.9 |
120.0 |
| CD |
CE |
NZ |
H20 |
120.0 |
239.9 |
| H19 |
CE |
NZ |
H20 |
240.1 |
119.9 |
| CAK |
CAJ |
CAI |
H6 |
181.0 |
179.8 |
| CAJ |
CAK |
CAL |
H7 |
180.3 |
180.0 |
| C |
CA |
N |
H9 |
79.1 |
95.0 |
| C |
CA |
CB |
CG |
177.3 |
175.0 |
| CB |
CA |
C |
H10 |
239.9 |
240.0 |
| C |
CA |
CB |
H13 |
297.6 |
295.0 |
| C |
CA |
CB |
H14 |
57.0 |
55.0 |
| NAW |
C |
CA |
CB |
96.6 |
300.0 |
| NAW |
C |
CA |
H10 |
216.7 |
60.0 |
| H11 |
NAW |
C |
H12 |
180.0 |
179.9 |
| CAM |
N |
CA |
H9 |
180.0 |
180.0 |
| C |
CA |
CB |
H10 |
120.0 |
119.9 |
| CB |
CA |
N |
H9 |
319.1 |
335.0 |
| CG |
CB |
CA |
H13 |
239.7 |
240.0 |
| CG |
CB |
CA |
H14 |
120.3 |
120.0 |
| CA |
CB |
CG |
H15 |
166.4 |
300.0 |
| CA |
CB |
CG |
H16 |
47.6 |
60.0 |
| H13 |
CB |
CA |
H14 |
240.6 |
240.0 |
| NZ |
CE |
CD |
H19 |
120.0 |
240.0 |
| NZ |
CE |
CD |
H20 |
239.9 |
120.0 |
| CE |
CD |
CG |
H15 |
7.1 |
60.0 |
| CE |
CD |
CG |
H16 |
125.9 |
300.0 |
| H17 |
CD |
CE |
H18 |
240.8 |
120.1 |
| H19 |
CE |
CD |
H20 |
119.9 |
240.0 |
| CD |
CG |
CB |
H13 |
166.7 |
60.0 |
| CD |
CG |
CB |
H14 |
47.2 |
300.0 |
| CB |
CG |
CD |
H15 |
239.4 |
120.0 |
| CB |
CG |
CD |
H16 |
120.6 |
240.0 |
| H15 |
CG |
CD |
H16 |
241.2 |
120.0 |
| CAE |
NAD |
CAC |
H3 |
180.1 |
180.0 |
| CAE |
CAF |
CAA |
H1 |
179.1 |
179.7 |
| CAG |
CAF |
CAE |
H4 |
0.0 |
359.7 |
| CAG |
CAF |
CAA |
H1 |
0.2 |
0.3 |
| CAK |
CAL |
CAG |
H7 |
180.0 |
180.0 |
| NAD |
CAC |
CAB |
H2 |
180.1 |
180.0 |
| CAB |
CAA |
CAF |
H1 |
180.0 |
179.7 |
| CAF |
CAA |
CAB |
H2 |
180.3 |
180.3 |
| CAI |
CAJ |
CAK |
CAL |
359.2 |
0.3 |
| CAG |
CAL |
CAK |
H7 |
180.0 |
180.0 |
| CG |
CB |
CA |
H10 |
57.3 |
55.1 |
| CA |
CB |
CG |
H13 |
120.3 |
120.0 |
| CA |
CB |
CG |
H14 |
239.7 |
240.0 |
| CD |
CG |
CB |
H15 |
120.6 |
240.0 |
| CD |
CG |
CB |
H16 |
239.4 |
120.0 |
| H13 |
CB |
CG |
H14 |
119.4 |
120.1 |
| H15 |
CG |
CB |
H16 |
118.8 |
240.0 |
| CAC |
CAB |
CAA |
H1 |
180.3 |
179.9 |
| CAA |
CAB |
CAC |
H2 |
180.0 |
180.1 |
| CAF |
CAA |
CAB |
H1 |
180.0 |
180.3 |
| CAC |
CAB |
CAA |
H2 |
180.0 |
179.9 |
| H1 |
CAA |
CAB |
H2 |
0.3 |
0.0 |
| H2 |
CAB |
CAA |
H1 |
0.3 |
0.0 |
| H3 |
CAC |
CAB |
H2 |
0.1 |
359.9 |
| H5 |
CAH |
CAG |
CAL |
180.2 |
180.2 |
| H6 |
CAI |
CAH |
H5 |
359.3 |
0.0 |
| H6 |
CAI |
CAJ |
CAK |
181.0 |
179.8 |
| H8 |
CAK |
CAL |
H7 |
0.4 |
360.0 |
| C |
CA |
H10 |
CB |
239.5 |
240.1 |
| H10 |
CA |
N |
H9 |
198.9 |
215.0 |
| H10 |
CA |
CB |
CG |
57.3 |
55.1 |
| H10 |
CA |
CB |
H13 |
177.6 |
175.0 |
| H10 |
CA |
CB |
H14 |
297.0 |
295.0 |
| C |
NAW |
H11 |
H12 |
180.0 |
180.1 |
| C |
NAW |
H12 |
H11 |
180.0 |
179.9 |
| CA |
CB |
H13 |
CG |
238.3 |
240.1 |
| H13 |
CB |
CA |
H10 |
177.6 |
175.0 |
| CA |
CB |
H13 |
H14 |
119.1 |
120.0 |
| CG |
CB |
H13 |
H14 |
240.8 |
239.9 |
| H13 |
CB |
CG |
H15 |
46.1 |
180.0 |
| H13 |
CB |
CG |
H16 |
287.3 |
300.0 |
| CA |
CB |
H14 |
CG |
121.7 |
119.9 |
| H14 |
CB |
CA |
H10 |
297.0 |
295.0 |
| CA |
CB |
H14 |
H13 |
240.9 |
240.0 |
| CG |
CB |
H14 |
H13 |
119.1 |
120.1 |
| H14 |
CB |
CG |
H15 |
286.6 |
59.9 |
| H14 |
CB |
CG |
H16 |
167.8 |
180.0 |
| CD |
CG |
H15 |
H16 |
118.2 |
240.0 |
| H15 |
CG |
CB |
H13 |
46.1 |
180.0 |
| H15 |
CG |
CB |
H14 |
286.6 |
59.9 |
| CB |
CG |
H15 |
H16 |
241.8 |
120.0 |
| CD |
CG |
H16 |
H15 |
241.8 |
120.0 |
| H16 |
CG |
CB |
H13 |
287.3 |
300.0 |
| H16 |
CG |
CB |
H14 |
167.8 |
180.0 |
| CB |
CG |
H16 |
H15 |
118.2 |
240.0 |
| CE |
CD |
H17 |
H18 |
118.7 |
239.9 |
| H17 |
CD |
CE |
H19 |
155.6 |
180.0 |
| H17 |
CD |
CE |
H20 |
35.7 |
300.0 |
| H17 |
CD |
CG |
H15 |
246.6 |
180.0 |
| H17 |
CD |
CG |
H16 |
5.5 |
60.0 |
| CE |
CD |
H18 |
H17 |
241.3 |
120.1 |
| H18 |
CD |
CE |
H19 |
274.8 |
60.0 |
| H18 |
CD |
CE |
H20 |
154.9 |
180.0 |
| H18 |
CD |
CG |
H15 |
127.5 |
300.0 |
| H18 |
CD |
CG |
H16 |
246.3 |
180.0 |
| NZ |
CE |
H19 |
H20 |
119.8 |
240.1 |
| H19 |
CE |
CD |
H17 |
155.6 |
180.0 |
| H19 |
CE |
CD |
H18 |
274.8 |
60.0 |
| CD |
CE |
H19 |
H20 |
240.2 |
120.1 |
| NZ |
CE |
H20 |
H19 |
240.2 |
119.9 |
| H20 |
CE |
CD |
H17 |
35.7 |
300.0 |
| H20 |
CE |
CD |
H18 |
154.9 |
180.0 |
| CD |
CE |
H20 |
H19 |
119.8 |
240.0 |
| H21 |
NZ |
CE |
H19 |
300.0 |
296.1 |
| H21 |
NZ |
CE |
H20 |
59.9 |
176.2 |
| H22 |
NZ |
CE |
H19 |
60.0 |
60.0 |
| H22 |
NZ |
CE |
H20 |
179.9 |
300.1 |