PDB Chemical Component 3BM
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 3BM
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C02 |
C01 |
1.418 |
1.389 |
| C01 |
N07 |
1.420 |
1.397 |
| C01 |
C06 |
1.407 |
1.390 |
| C03 |
C02 |
1.409 |
1.382 |
| C02 |
H02 |
1.080 |
1.080 |
| C03 |
C04 |
1.415 |
1.383 |
| C03 |
H03 |
1.080 |
1.080 |
| I23 |
C04 |
2.056 |
2.095 |
| C04 |
C05 |
1.401 |
1.383 |
| C05 |
C06 |
1.388 |
1.382 |
| C05 |
H05 |
1.080 |
1.081 |
| C06 |
CL24 |
1.715 |
1.736 |
| C08 |
N07 |
1.392 |
1.391 |
| N07 |
HN07 |
0.999 |
0.970 |
| C13 |
C08 |
1.402 |
1.390 |
| C09 |
C08 |
1.425 |
1.405 |
| C10 |
C09 |
1.407 |
1.398 |
| C09 |
C14 |
1.493 |
1.474 |
| C11 |
C10 |
1.397 |
1.376 |
| C10 |
H10 |
1.080 |
1.080 |
| C11 |
C12 |
1.389 |
1.389 |
| C11 |
H11 |
1.080 |
1.081 |
| F26 |
C12 |
1.330 |
1.351 |
| C12 |
C13 |
1.400 |
1.385 |
| C13 |
F25 |
1.350 |
1.351 |
| N15 |
C14 |
1.374 |
1.348 |
| C14 |
O16 |
1.234 |
1.216 |
| N15 |
O17 |
1.435 |
1.416 |
| N15 |
HN15 |
1.001 |
0.970 |
| O17 |
C18 |
1.446 |
1.429 |
| C18 |
C19 |
1.535 |
1.530 |
| C18 |
H18 |
1.100 |
1.089 |
| C18 |
H18A |
1.100 |
1.090 |
| C19 |
C20 |
1.527 |
1.529 |
| C19 |
O21 |
1.447 |
1.429 |
| C19 |
H19 |
1.100 |
1.090 |
| C20 |
O22 |
1.428 |
1.429 |
| C20 |
H20 |
1.100 |
1.090 |
| C20 |
H20A |
1.100 |
1.089 |
| O21 |
HO21 |
0.950 |
0.967 |
| O22 |
HO22 |
0.950 |
0.968 |
Bond Angles for 3BM
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C02 |
C01 |
N07 |
123.7 |
120.1 |
| C02 |
C01 |
C06 |
118.0 |
119.8 |
| C06 |
C01 |
N07 |
118.4 |
120.1 |
| C01 |
N07 |
HN07 |
114.1 |
120.1 |
| C01 |
C06 |
C05 |
121.9 |
119.9 |
| C01 |
C06 |
CL24 |
120.0 |
120.1 |
| C03 |
C02 |
H02 |
119.3 |
120.0 |
| C04 |
C03 |
H03 |
121.0 |
120.0 |
| C03 |
C04 |
C05 |
121.2 |
120.1 |
| C04 |
C05 |
C06 |
119.2 |
120.1 |
| C04 |
C05 |
H05 |
120.4 |
120.0 |
| C06 |
C05 |
H05 |
120.4 |
119.9 |
| C05 |
C06 |
CL24 |
118.1 |
120.0 |
| C08 |
N07 |
HN07 |
114.1 |
119.9 |
| C10 |
C09 |
C14 |
118.7 |
120.2 |
| C09 |
C14 |
O16 |
119.7 |
120.0 |
| C11 |
C10 |
H10 |
119.8 |
120.0 |
| C12 |
C11 |
H11 |
120.4 |
119.8 |
| C11 |
C12 |
C13 |
121.1 |
120.3 |
| C12 |
C13 |
F25 |
118.0 |
120.0 |
| N15 |
C14 |
O16 |
123.5 |
120.0 |
| O17 |
N15 |
HN15 |
121.7 |
120.0 |
| N15 |
O17 |
C18 |
111.0 |
114.0 |
| O17 |
C18 |
C19 |
109.1 |
109.5 |
| O17 |
C18 |
H18 |
109.6 |
109.4 |
| O17 |
C18 |
H18A |
109.6 |
109.4 |
| C19 |
C18 |
H18 |
109.6 |
109.5 |
| C19 |
C18 |
H18A |
109.7 |
109.5 |
| C18 |
C19 |
C20 |
111.3 |
109.5 |
| C18 |
C19 |
O21 |
110.4 |
109.4 |
| C18 |
C19 |
H19 |
107.0 |
109.4 |
| H18 |
C18 |
H18A |
109.2 |
109.5 |
| C20 |
C19 |
O21 |
107.5 |
109.5 |
| C20 |
C19 |
H19 |
109.9 |
109.5 |
| C19 |
C20 |
O22 |
108.0 |
109.4 |
| C19 |
C20 |
H20 |
110.0 |
109.5 |
| C19 |
C20 |
H20A |
110.3 |
109.5 |
| O21 |
C19 |
H19 |
110.8 |
109.5 |
| C19 |
O21 |
HO21 |
109.5 |
114.0 |
| O22 |
C20 |
H20 |
109.9 |
109.4 |
| O22 |
C20 |
H20A |
110.3 |
109.5 |
| C20 |
O22 |
HO22 |
109.5 |
114.0 |
| H20 |
C20 |
H20A |
108.3 |
109.5 |
Torsion Angles for 3BM
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C06 |
C01 |
C02 |
N07 |
180.6 |
180.3 |
| C02 |
C01 |
N07 |
HN07 |
178.9 |
173.8 |
| C02 |
C01 |
C06 |
C05 |
0.8 |
359.5 |
| C02 |
C01 |
C06 |
CL24 |
177.6 |
179.7 |
| C02 |
C01 |
N07 |
C06 |
180.6 |
180.3 |
| N07 |
C01 |
C06 |
C05 |
181.4 |
179.8 |
| N07 |
C01 |
C06 |
CL24 |
358.2 |
360.0 |
| C08 |
N07 |
C01 |
HN07 |
180.0 |
180.0 |
| C02 |
C01 |
C06 |
N07 |
179.4 |
179.7 |
| C06 |
C01 |
N07 |
HN07 |
358.3 |
353.5 |
| C04 |
C05 |
C06 |
C01 |
357.9 |
0.5 |
| C01 |
C06 |
C05 |
H05 |
177.9 |
180.3 |
| C05 |
C06 |
C01 |
CL24 |
183.2 |
179.8 |
| C03 |
C02 |
C01 |
N07 |
178.6 |
180.0 |
| C03 |
C02 |
C01 |
C06 |
359.2 |
0.3 |
| H02 |
C02 |
C01 |
N07 |
358.6 |
359.9 |
| H02 |
C02 |
C01 |
C06 |
179.2 |
180.2 |
| C04 |
C03 |
C02 |
H02 |
182.1 |
180.0 |
| C03 |
C04 |
C05 |
C06 |
3.5 |
359.7 |
| C03 |
C04 |
C05 |
H05 |
183.5 |
179.9 |
| H03 |
C03 |
C02 |
H02 |
2.1 |
0.0 |
| H03 |
C03 |
C04 |
C05 |
176.5 |
180.1 |
| I23 |
C04 |
C03 |
H03 |
0.3 |
0.0 |
| I23 |
C04 |
C05 |
H05 |
359.8 |
359.9 |
| C01 |
C06 |
C05 |
C04 |
357.9 |
0.5 |
| C05 |
C04 |
C03 |
H03 |
176.5 |
180.1 |
| C06 |
C05 |
C04 |
H05 |
180.0 |
179.8 |
| C04 |
C05 |
C06 |
CL24 |
181.0 |
180.3 |
| C05 |
C06 |
C01 |
N07 |
181.4 |
179.8 |
| C01 |
C06 |
C05 |
CL24 |
176.8 |
180.2 |
| C04 |
C05 |
C06 |
H05 |
180.0 |
180.2 |
| C04 |
C05 |
H05 |
C06 |
180.0 |
179.8 |
| H05 |
C05 |
C06 |
CL24 |
1.0 |
0.1 |
| CL24 |
C06 |
C01 |
N07 |
358.2 |
360.0 |
| C01 |
C06 |
CL24 |
C05 |
183.1 |
179.8 |
| CL24 |
C06 |
C05 |
H05 |
1.0 |
0.1 |
| C01 |
N07 |
C08 |
HN07 |
180.0 |
180.0 |
| C13 |
C08 |
N07 |
HN07 |
227.6 |
82.8 |
| C09 |
C08 |
N07 |
HN07 |
50.5 |
263.1 |
| C10 |
C09 |
C14 |
O16 |
148.1 |
185.7 |
| N15 |
C14 |
C09 |
O16 |
184.6 |
180.0 |
| C11 |
C10 |
C09 |
C14 |
186.4 |
180.0 |
| H10 |
C10 |
C09 |
C14 |
6.4 |
360.0 |
| C12 |
C11 |
C10 |
H10 |
179.7 |
180.0 |
| C11 |
C12 |
C13 |
F25 |
182.2 |
180.0 |
| H11 |
C11 |
C10 |
H10 |
359.6 |
0.1 |
| H11 |
C11 |
C12 |
C13 |
180.2 |
179.7 |
| F26 |
C12 |
C11 |
H11 |
2.3 |
359.9 |
| C13 |
C12 |
C11 |
H11 |
180.2 |
179.7 |
| C09 |
C14 |
N15 |
O16 |
175.2 |
180.0 |
| O17 |
N15 |
C14 |
O16 |
3.8 |
0.0 |
| N15 |
O17 |
C18 |
C19 |
211.7 |
180.0 |
| N15 |
O17 |
C18 |
H18 |
331.7 |
300.0 |
| N15 |
O17 |
C18 |
H18A |
91.6 |
60.0 |
| HN15 |
N15 |
C14 |
O16 |
183.8 |
180.1 |
| HN15 |
N15 |
O17 |
C18 |
119.0 |
360.0 |
| C18 |
O17 |
N15 |
HN15 |
119.0 |
360.0 |
| C19 |
C18 |
O17 |
H18 |
240.0 |
240.0 |
| C19 |
C18 |
O17 |
H18A |
120.1 |
120.0 |
| O17 |
C18 |
C19 |
C20 |
110.9 |
175.0 |
| O17 |
C18 |
C19 |
O21 |
230.2 |
295.0 |
| O17 |
C18 |
C19 |
H19 |
350.9 |
55.0 |
| H18 |
C18 |
O17 |
H18A |
240.1 |
239.9 |
| O17 |
C18 |
C19 |
H18 |
120.0 |
120.0 |
| O17 |
C18 |
C19 |
H18A |
239.9 |
240.1 |
| H18 |
C18 |
C19 |
H18A |
119.9 |
120.1 |
| C20 |
C19 |
C18 |
O21 |
240.7 |
240.0 |
| C20 |
C19 |
C18 |
H19 |
120.1 |
120.0 |
| C18 |
C19 |
C20 |
O22 |
182.9 |
185.0 |
| C18 |
C19 |
C20 |
H20 |
302.9 |
305.0 |
| C18 |
C19 |
C20 |
H20A |
62.3 |
65.0 |
| O21 |
C19 |
C18 |
H19 |
239.4 |
240.0 |
| C18 |
C19 |
O21 |
HO21 |
269.8 |
300.0 |
| O17 |
C18 |
H18 |
C19 |
240.3 |
240.0 |
| O17 |
C18 |
H18 |
H18A |
120.1 |
120.0 |
| C19 |
C18 |
H18 |
H18A |
239.8 |
240.0 |
| H18 |
C18 |
C19 |
C20 |
350.9 |
55.1 |
| H18 |
C18 |
C19 |
O21 |
110.2 |
175.0 |
| H18 |
C18 |
C19 |
H19 |
230.9 |
295.0 |
| O17 |
C18 |
H18A |
C19 |
119.8 |
120.0 |
| O17 |
C18 |
H18A |
H18 |
239.9 |
240.0 |
| C19 |
C18 |
H18A |
H18 |
120.1 |
120.0 |
| H18A |
C18 |
C19 |
C20 |
231.0 |
295.0 |
| H18A |
C18 |
C19 |
O21 |
350.3 |
55.0 |
| H18A |
C18 |
C19 |
H19 |
111.0 |
174.9 |
| C20 |
C19 |
C18 |
H18 |
350.9 |
55.1 |
| C20 |
C19 |
C18 |
H18A |
231.0 |
295.0 |
| C18 |
C19 |
C20 |
O21 |
121.0 |
120.0 |
| C18 |
C19 |
C20 |
H19 |
241.7 |
240.0 |
| O21 |
C19 |
C20 |
H19 |
120.7 |
120.1 |
| C20 |
C19 |
O21 |
HO21 |
31.4 |
60.0 |
| O22 |
C20 |
C19 |
H20 |
240.0 |
240.1 |
| O22 |
C20 |
C19 |
H20A |
120.6 |
120.0 |
| C19 |
C20 |
O22 |
HO22 |
255.3 |
180.0 |
| H20 |
C20 |
C19 |
H20A |
240.6 |
240.0 |
| O21 |
C19 |
C18 |
H18 |
110.2 |
175.0 |
| O21 |
C19 |
C18 |
H18A |
350.3 |
55.0 |
| C18 |
C19 |
O21 |
C20 |
238.4 |
240.0 |
| C18 |
C19 |
O21 |
H19 |
118.3 |
119.9 |
| C20 |
C19 |
O21 |
H19 |
239.9 |
239.9 |
| O21 |
C19 |
C20 |
O22 |
61.9 |
65.0 |
| O21 |
C19 |
C20 |
H20 |
181.9 |
185.0 |
| O21 |
C19 |
C20 |
H20A |
301.3 |
305.0 |
| H19 |
C19 |
C18 |
H18 |
230.9 |
295.0 |
| H19 |
C19 |
C18 |
H18A |
111.0 |
174.9 |
| C18 |
C19 |
H19 |
C20 |
121.0 |
120.0 |
| C18 |
C19 |
H19 |
O21 |
239.6 |
240.1 |
| C20 |
C19 |
H19 |
O21 |
118.7 |
120.1 |
| H19 |
C19 |
C20 |
O22 |
301.2 |
305.0 |
| H19 |
C19 |
C20 |
H20 |
61.2 |
64.9 |
| H19 |
C19 |
C20 |
H20A |
180.6 |
185.0 |
| H19 |
C19 |
O21 |
HO21 |
151.5 |
180.1 |
| O22 |
C20 |
C19 |
O21 |
61.9 |
65.0 |
| O22 |
C20 |
C19 |
H19 |
301.2 |
305.0 |
| C19 |
C20 |
O22 |
H20 |
120.0 |
120.0 |
| C19 |
C20 |
O22 |
H20A |
239.4 |
240.0 |
| H20 |
C20 |
O22 |
H20A |
119.4 |
120.0 |
| H20 |
C20 |
C19 |
O21 |
181.9 |
185.0 |
| H20 |
C20 |
C19 |
H19 |
61.2 |
64.9 |
| C19 |
C20 |
H20 |
O22 |
241.2 |
240.1 |
| C19 |
C20 |
H20 |
H20A |
120.6 |
120.0 |
| O22 |
C20 |
H20 |
H20A |
239.4 |
240.0 |
| H20 |
C20 |
O22 |
HO22 |
135.3 |
60.0 |
| H20A |
C20 |
C19 |
O21 |
301.3 |
305.0 |
| H20A |
C20 |
C19 |
H19 |
180.6 |
185.0 |
| C19 |
C20 |
H20A |
O22 |
119.2 |
120.0 |
| C19 |
C20 |
H20A |
H20 |
239.6 |
240.0 |
| O22 |
C20 |
H20A |
H20 |
120.4 |
120.0 |
| H20A |
C20 |
O22 |
HO22 |
15.9 |
300.0 |
| HO21 |
O21 |
C19 |
H19 |
151.5 |
180.1 |
| HO22 |
O22 |
C20 |
H20 |
135.3 |
60.0 |
| HO22 |
O22 |
C20 |
H20A |
15.9 |
300.0 |