PDB Chemical Component 3B8

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 3B8

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C5	C6	1.413	1.378
C5	C4	1.416	1.389
C6	C1	1.412	1.392
C3	C2	1.422	1.393
C3	C4	1.411	1.381
C2	C1	1.433	1.403
C2	C8	1.502	1.480
C1	O7	1.377	1.348
O11	C20	1.234	1.217
C4	F9	1.335	1.351
O7	C17	1.388	1.345
C8	O10	1.236	1.217
C8	C16	1.495	1.476
N12	C20	1.370	1.348
C13	C14	1.429	1.410
C13	N18	1.368	1.321
C13	N19	1.379	1.378
C14	C15	1.437	1.397
C14	C20	1.505	1.474
C15	C16	1.426	1.393
C16	C17	1.413	1.409
C17	N18	1.372	1.327
C5	H5	1.080	1.080
C6	H6	1.080	1.080
C3	H3	1.080	1.080
N12	HN12	1.000	0.970
N12	HN1A	1.000	0.969
C15	H15	1.080	1.080
N19	HN19	1.000	0.970
N19	HN1B	1.000	0.971

Bond Angles for 3B8

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C6	C5	C4	120.2	120.8
C5	C6	C1	119.6	120.2
C6	C5	H5	119.9	119.6
C5	C6	H6	120.2	119.9
C5	C4	C3	121.2	120.0
C5	C4	F9	119.3	120.0
C4	C5	H5	119.9	119.6
C6	C1	C2	119.9	118.9
C6	C1	O7	116.7	120.0
C1	C6	H6	120.2	119.9
C2	C3	C4	118.6	119.5
C3	C2	C1	120.4	120.6
C3	C2	C8	121.3	121.0
C2	C3	H3	120.7	120.3
C3	C4	F9	119.5	120.0
C4	C3	H3	120.7	120.2
C1	C2	C8	118.2	118.4
C2	C1	O7	123.4	121.1
C2	C8	O10	121.6	122.1
C2	C8	C16	116.6	115.8
C1	O7	C17	119.2	122.2
O11	C20	N12	120.2	120.0
O11	C20	C14	120.9	120.0
O7	C17	C16	124.1	120.8
O7	C17	N18	113.3	119.6
O10	C8	C16	121.8	122.1
C8	C16	C15	123.4	121.1
C8	C16	C17	118.4	118.6
N12	C20	C14	118.9	120.0
C20	N12	HN12	111.6	120.0
C20	N12	HN1A	124.2	120.0
C14	C13	N18	122.2	121.2
C14	C13	N19	124.1	119.3
C13	C14	C15	117.5	118.8
C13	C14	C20	123.7	120.6
N18	C13	N19	113.6	119.4
C13	N18	C17	119.6	122.1
C13	N19	HN19	109.5	120.0
C13	N19	HN1B	109.5	119.9
C15	C14	C20	118.8	120.6
C14	C15	C16	119.9	117.9
C14	C15	H15	120.1	121.0
C15	C16	C17	118.2	120.4
C16	C15	H15	120.0	121.0
C16	C17	N18	122.6	119.6
HN12	N12	HN1A	124.2	120.0
HN19	N19	HN1B	109.4	120.0

Torsion Angles for 3B8

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C6	C5	C4	C3	0.2	0.2
C6	C5	C4	F9	180.3	180.2
C4	C5	C6	H5	180.0	180.2
C5	C6	C1	C2	359.7	359.8
C5	C6	C1	O7	179.4	179.4
C1	C6	C5	H6	180.0	180.0
C4	C5	C6	C1	0.1	360.0
C6	C5	C4	H5	180.0	179.8
C4	C5	C6	H6	180.1	180.0
C2	C3	C4	C5	359.7	0.0
C3	C4	C5	F9	179.9	180.0
C5	C4	C3	H3	179.7	180.0
C1	C6	C5	C4	0.1	360.0
C1	C6	C5	H5	180.1	179.7
C5	C6	C1	H6	180.0	180.0
C3	C2	C1	C6	0.2	0.4
C6	C1	C2	C8	179.9	180.8
C2	C1	C6	O7	180.3	180.3
C6	C1	O7	C17	180.5	164.1
C5	C4	C3	C2	359.7	0.0
C6	C1	C2	C3	0.2	0.4
C2	C3	C4	F9	179.6	180.0
C4	C3	C2	H3	180.0	180.0
C1	C2	C3	C8	179.7	180.4
C3	C2	C1	O7	180.5	180.7
C3	C2	C8	O10	359.7	13.1
C3	C2	C8	C16	179.3	193.0
C5	C4	C3	F9	180.1	180.0
C3	C4	C5	H5	180.2	180.4
C4	C3	C2	C1	0.1	359.7
C4	C3	C2	C8	180.4	179.3
C2	C3	C4	H3	180.0	180.0
C6	C1	C2	O7	179.7	179.7
C2	C1	C6	H6	179.7	179.7
C1	C2	C3	C4	0.1	359.7
C3	C2	C1	C8	180.3	179.6
C1	C2	C3	H3	180.1	179.7
C1	C2	C8	O10	180.0	192.7
C1	C2	C8	C16	359.6	12.6
C2	C1	O7	C17	0.2	343.7
C8	C2	C3	C4	180.4	179.3
C3	C2	C8	C1	179.7	180.4
C8	C2	C3	H3	0.4	359.3
C8	C2	C1	O7	0.2	1.1
O10	C8	C2	C16	180.4	180.1
C2	C8	C16	C15	180.4	167.1
C2	C8	C16	C17	0.3	347.3
C6	C1	O7	C2	180.3	180.3
O7	C1	C6	H6	359.4	359.4
O7	C1	C2	C8	0.2	1.1
C1	O7	C17	C16	359.6	16.1
C1	O7	C17	N18	179.4	196.0
N12	C20	O11	C14	180.8	180.0
O11	C20	N12	HN12	180.0	0.0
O11	C20	N12	HN1A	0.0	180.1
C13	C14	C20	O11	12.0	6.0
C15	C14	C20	O11	192.2	185.9
C5	C4	F9	C3	179.9	180.0
F9	C4	C5	H5	0.3	0.4
F9	C4	C3	H3	359.6	360.0
C8	C16	C17	O7	0.1	359.0
C13	N18	C17	O7	180.2	180.6
C15	C16	C17	O7	180.0	179.2
C16	C17	O7	N18	180.3	180.1
C2	C8	O10	C16	179.6	179.9
O10	C8	C16	C15	0.0	347.0
O10	C8	C16	C17	179.8	167.2
C2	C8	C16	O10	180.4	180.1
O7	C17	C16	C8	0.1	359.0
C14	C15	C16	C8	179.7	180.6
C15	C16	C8	C17	180.2	179.8
C8	C16	C15	H15	359.7	0.5
C8	C16	C17	N18	180.4	179.2
O11	C20	N12	C14	179.2	180.0
C13	C14	C20	N12	191.2	186.0
C15	C14	C20	N12	11.4	5.9
HN12	N12	C20	HN1A	180.0	179.9
O11	C20	C14	C13	12.0	6.0
N12	C20	C14	C13	191.2	186.0
N18	C13	C14	N19	180.1	180.0
C14	C13	N18	C17	359.8	0.0
C14	C13	N19	HN19	127.9	354.3
C14	C13	N19	HN1B	247.9	174.3
C15	C14	C13	C20	179.8	180.1
C13	C14	C15	C16	360.0	0.1
C13	C14	C15	H15	180.0	180.1
O7	C17	N18	C13	180.2	180.6
C14	C13	N18	N19	179.9	180.0
N18	C13	C14	C15	0.2	359.7
N18	C13	C14	C20	180.5	179.6
N18	C13	N19	HN19	307.8	174.2
N18	C13	N19	HN1B	67.8	354.3
C16	C17	N18	C13	359.9	0.5
C14	C13	N19	N18	180.1	180.0
N19	C13	C14	C15	180.1	179.6
N19	C13	C14	C20	0.3	359.6
N19	C13	N18	C17	179.9	180.1
HN19	N19	C13	HN1B	240.0	179.9
O11	C20	C14	C15	192.2	185.9
C8	C16	C15	C14	179.7	180.6
N12	C20	C14	C15	11.4	5.9
C15	C14	C13	N18	0.2	359.7
C15	C14	C13	N19	180.1	179.6
C13	C14	C15	C20	180.2	179.9
C14	C15	C16	C17	359.8	0.4
C16	C15	C14	H15	180.0	180.0
O11	C20	C14	N12	180.8	180.0
C14	C20	N12	HN12	0.8	180.0
C14	C20	N12	HN1A	180.8	0.1
C20	C14	C13	N18	180.5	179.6
C20	C14	C13	N19	0.3	359.6
C13	C14	C20	C15	179.8	180.1
C20	C14	C15	C16	179.7	180.2
C20	C14	C15	H15	359.7	0.2
O7	C17	C16	C15	180.0	179.2
C8	C16	C15	C17	179.8	180.2
C16	C15	C14	C20	179.7	180.2
C14	C15	C16	H15	180.0	180.0
C15	C16	C17	N18	0.3	359.3
O7	C17	C16	N18	179.7	179.9
C8	C16	C17	C15	180.1	179.8
C13	N18	C17	C16	359.9	0.5
C17	C16	C15	H15	179.8	180.4
O7	C17	N18	C16	180.3	180.1
C17	N18	C13	N19	179.9	180.1
C6	C5	H5	C4	180.0	180.2
H5	C5	C6	C1	180.1	179.7
H5	C5	C6	H6	0.1	359.7
H5	C5	C4	C3	180.2	180.4
H5	C5	C4	F9	0.3	0.4
H6	C6	C5	C4	180.1	180.0
C5	C6	H6	C1	180.0	180.0
H6	C6	C5	H5	0.1	359.7
H6	C6	C1	C2	179.7	179.7
H6	C6	C1	O7	359.4	359.4
C2	C3	H3	C4	180.0	180.0
H3	C3	C2	C1	180.1	179.7
H3	C3	C2	C8	0.4	359.3
H3	C3	C4	F9	359.6	360.0
HN12	N12	C20	C14	0.8	180.0
C20	N12	HN12	HN1A	180.0	180.1
HN1A	N12	C20	C14	180.8	0.1
C20	N12	HN1A	HN12	180.0	179.9
H15	C15	C14	C20	359.7	0.2
C14	C15	H15	C16	180.0	180.0
H15	C15	C16	C17	179.8	180.4
C13	N19	HN19	HN1B	120.0	180.1
C13	N19	HN1B	HN19	240.0	179.9